==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 02-MAY-08 2K3D . COMPND 2 MOLECULE: LIN0334 PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: LISTERIA INNOCUA CLIP11262; . AUTHOR T.A.RAMELOT,L.ZHAO,M.JIANG,E.L.FOOTE,R.XIAO,J.LIU,M.C.BARAN, . 87 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6390.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 50 57.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 17 19.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 4.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 8.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 22 25.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 12 A A > 0 0 81 0, 0.0 4,-2.3 0, 0.0 5,-0.2 0.000 360.0 360.0 360.0 159.3 -8.4 12.9 -11.0 2 13 A F H > + 0 0 165 1,-0.2 4,-2.0 2,-0.2 5,-0.2 0.927 360.0 48.9 -60.4 -43.6 -10.5 10.3 -9.1 3 14 A F H > S+ 0 0 77 1,-0.2 4,-1.9 2,-0.2 -1,-0.2 0.916 109.7 52.4 -63.6 -40.8 -7.9 7.6 -9.7 4 15 A N H > S+ 0 0 86 1,-0.2 4,-2.1 2,-0.2 -1,-0.2 0.911 107.7 51.8 -62.7 -40.7 -5.1 10.0 -8.6 5 16 A E H X S+ 0 0 90 -4,-2.3 4,-2.6 1,-0.2 5,-0.2 0.917 107.2 52.7 -64.1 -41.1 -7.0 10.6 -5.3 6 17 A Q H X S+ 0 0 23 -4,-2.0 4,-2.5 1,-0.2 5,-0.2 0.920 108.9 50.0 -62.0 -41.2 -7.3 6.9 -4.6 7 18 A K H X S+ 0 0 57 -4,-1.9 4,-2.5 1,-0.2 5,-0.2 0.924 111.5 48.6 -64.1 -42.1 -3.5 6.4 -5.1 8 19 A E H X S+ 0 0 124 -4,-2.1 4,-2.5 2,-0.2 5,-0.3 0.927 112.4 48.0 -65.0 -43.3 -2.8 9.3 -2.7 9 20 A K H X S+ 0 0 46 -4,-2.6 4,-2.7 2,-0.2 5,-0.2 0.934 113.7 47.1 -64.3 -44.3 -5.2 8.0 -0.0 10 21 A V H X S+ 0 0 5 -4,-2.5 4,-2.5 -5,-0.2 -2,-0.2 0.937 113.9 47.1 -64.5 -45.3 -3.8 4.4 -0.3 11 22 A T H X S+ 0 0 31 -4,-2.5 4,-1.9 -5,-0.2 5,-0.2 0.954 116.4 43.7 -62.4 -48.0 -0.1 5.7 -0.1 12 23 A L H X S+ 0 0 50 -4,-2.5 4,-1.6 -5,-0.2 -2,-0.2 0.916 114.7 50.2 -64.1 -41.9 -0.9 7.9 2.9 13 24 A Y H X S+ 0 0 2 -4,-2.7 4,-1.9 -5,-0.3 5,-0.2 0.901 107.6 54.3 -64.0 -40.6 -2.9 5.2 4.6 14 25 A L H X S+ 0 0 0 -4,-2.5 4,-0.9 -5,-0.2 -1,-0.2 0.943 110.4 44.5 -62.1 -46.1 -0.2 2.6 4.1 15 26 A K H < S+ 0 0 87 -4,-1.9 -1,-0.2 1,-0.2 6,-0.2 0.830 109.5 58.0 -68.9 -29.2 2.5 4.8 5.8 16 27 A H H < S+ 0 0 90 -4,-1.6 -1,-0.2 1,-0.2 -2,-0.2 0.910 117.4 31.3 -68.5 -39.7 0.1 5.7 8.6 17 28 A N H < S+ 0 0 5 -4,-1.9 53,-0.9 1,-0.2 54,-0.4 0.502 127.7 47.5 -94.6 -3.7 -0.5 2.0 9.6 18 29 A I >< + 0 0 1 -4,-0.9 3,-1.5 -5,-0.2 -1,-0.2 -0.795 57.7 177.5-138.4 94.0 3.1 1.1 8.5 19 30 A P T 3 S+ 0 0 93 0, 0.0 -1,-0.1 0, 0.0 -4,-0.1 0.692 85.7 61.0 -69.9 -16.5 5.8 3.5 9.8 20 31 A D T 3 S+ 0 0 106 48,-0.1 -5,-0.1 -5,-0.0 48,-0.0 0.368 76.5 133.8 -90.1 5.5 8.4 1.3 8.1 21 32 A F < + 0 0 36 -3,-1.5 3,-0.1 -6,-0.2 -6,-0.0 -0.318 26.0 171.5 -58.1 133.8 6.8 2.0 4.7 22 33 A N - 0 0 120 1,-0.4 2,-0.3 -2,-0.0 -1,-0.2 0.772 57.9 -22.4-110.2 -58.1 9.4 2.9 2.1 23 34 A T - 0 0 52 2,-0.0 20,-1.5 -8,-0.0 2,-0.4 -0.990 51.1-137.2-153.5 160.5 7.7 3.1 -1.3 24 35 A V E -A 42 0A 23 -2,-0.3 2,-0.5 18,-0.2 18,-0.2 -0.976 13.6-166.2-125.3 134.7 4.5 1.9 -3.0 25 36 A T E -A 41 0A 42 16,-2.5 16,-1.7 -2,-0.4 2,-0.3 -0.970 7.0-154.2-123.5 125.8 4.3 0.5 -6.6 26 37 A F E +A 40 0A 56 -2,-0.5 14,-0.2 14,-0.2 12,-0.0 -0.741 23.8 158.7 -97.0 144.6 1.0 0.0 -8.5 27 38 A T + 0 0 100 12,-1.9 13,-0.1 -2,-0.3 -1,-0.1 -0.229 60.5 44.8-161.9 61.1 0.7 -2.5 -11.3 28 39 A N + 0 0 79 2,-0.0 10,-0.1 9,-0.0 12,-0.1 -0.029 47.3 175.7-161.5 -83.0 -2.9 -3.5 -11.9 29 40 A E + 0 0 67 10,-0.2 2,-0.3 1,-0.2 9,-0.2 0.989 26.9 167.9 56.1 75.1 -5.7 -0.9 -12.1 30 41 A E E -D 37 0B 107 7,-2.5 7,-2.4 0, 0.0 2,-0.6 -0.891 37.3-120.1-120.3 150.6 -8.6 -3.1 -13.0 31 42 A F E -D 36 0B 128 -2,-0.3 5,-0.3 5,-0.2 7,-0.0 -0.784 30.8-166.4 -92.2 120.3 -12.4 -2.4 -13.1 32 43 A N E > -D 35 0B 75 3,-0.9 3,-0.8 -2,-0.6 5,-0.0 -0.735 35.8-106.7-103.5 156.0 -14.4 -4.6 -10.7 33 44 A P T 3 S+ 0 0 144 0, 0.0 -1,-0.1 0, 0.0 3,-0.0 0.845 122.8 52.7 -47.3 -38.0 -18.2 -5.1 -10.6 34 45 A I T 3 S- 0 0 113 1,-0.1 2,-0.1 2,-0.0 3,-0.0 0.898 131.6 -85.8 -68.7 -37.7 -18.3 -3.0 -7.4 35 46 A G E < S-D 32 0B 24 -3,-0.8 -3,-0.9 19,-0.0 2,-0.3 -0.560 84.1 -2.9 170.1 -98.4 -16.3 -0.2 -9.0 36 47 A I E -D 31 0B 29 -5,-0.3 2,-0.4 -2,-0.1 18,-0.4 -0.871 49.1-159.4-123.4 157.8 -12.5 -0.1 -9.2 37 48 A S E -D 30 0B 11 -7,-2.4 -7,-2.5 -2,-0.3 2,-0.4 -0.975 6.2-171.9-140.0 123.8 -9.7 -2.4 -7.9 38 49 A I E - B 0 52A 4 14,-3.6 14,-2.5 -2,-0.4 2,-0.3 -0.951 5.9-179.8-118.6 133.1 -6.1 -1.4 -7.3 39 50 A D E + B 0 51A 50 -2,-0.4 -12,-1.9 12,-0.2 2,-0.3 -0.968 17.0 128.2-131.2 147.1 -3.3 -3.8 -6.4 40 51 A G E -AB 26 50A 1 10,-2.0 10,-3.0 -2,-0.3 2,-0.3 -0.951 39.6-113.2-172.4-170.6 0.4 -3.3 -5.8 41 52 A Y E -AB 25 49A 44 -16,-1.7 -16,-2.5 -2,-0.3 2,-0.3 -0.926 16.6-135.3-141.4 165.6 3.3 -3.9 -3.3 42 53 A I E > S+A 24 0A 0 6,-1.5 3,-1.8 3,-0.4 6,-0.2 -0.820 78.9 27.1-121.8 162.8 5.6 -2.0 -1.0 43 54 A N T 3 S- 0 0 51 -20,-1.5 -1,-0.2 -2,-0.3 -19,-0.1 0.842 120.3 -78.7 57.8 33.2 9.3 -2.0 -0.2 44 55 A N T 3 S+ 0 0 123 -21,-0.3 2,-0.7 -3,-0.2 -1,-0.3 0.797 99.2 136.5 48.3 26.7 10.0 -3.4 -3.7 45 56 A D X - 0 0 55 -3,-1.8 3,-0.6 3,-0.2 -3,-0.4 -0.882 44.7-164.1-108.6 108.6 8.8 -6.8 -2.2 46 57 A K T 3 S+ 0 0 148 -2,-0.7 -1,-0.2 1,-0.2 -2,-0.1 0.852 91.4 61.5 -58.2 -32.5 6.5 -8.7 -4.5 47 58 A N T 3 S+ 0 0 100 1,-0.2 2,-1.9 -3,-0.1 -1,-0.2 0.910 91.9 68.4 -62.6 -39.7 5.5 -10.9 -1.6 48 59 A L S < S+ 0 0 21 -3,-0.6 -6,-1.5 -6,-0.2 2,-0.3 -0.538 75.2 158.7 -81.9 80.3 4.2 -7.8 0.3 49 60 A S E -B 41 0A 41 -2,-1.9 13,-1.7 -8,-0.2 2,-0.3 -0.748 20.6-168.8-104.9 153.4 1.2 -7.2 -2.0 50 61 A F E -BC 40 61A 0 -10,-3.0 -10,-2.0 -2,-0.3 2,-0.4 -0.981 5.6-158.8-139.6 151.0 -2.0 -5.2 -1.1 51 62 A T E +BC 39 60A 56 9,-3.4 9,-2.7 -2,-0.3 2,-0.3 -0.993 16.9 162.2-133.7 136.2 -5.4 -4.8 -2.8 52 63 A A E -BC 38 59A 7 -14,-2.5 -14,-3.6 -2,-0.4 7,-0.2 -0.990 11.4-173.3-149.3 155.2 -8.0 -2.0 -2.3 53 64 A G + 0 0 14 5,-0.9 -16,-0.2 1,-0.3 2,-0.1 0.049 61.4 7.6-120.4-130.3 -11.0 -0.7 -4.2 54 65 A K S >> S- 0 0 116 -18,-0.4 3,-0.8 2,-0.1 4,-0.7 -0.348 119.4 -35.2 -59.2 128.6 -13.3 2.4 -3.7 55 66 A D T 34 S- 0 0 41 1,-0.2 3,-0.5 2,-0.1 -2,-0.3 0.150 93.3 -67.9 44.9-173.4 -11.8 4.6 -1.0 56 67 A V T 34 S+ 0 0 10 1,-0.2 -1,-0.2 -4,-0.1 3,-0.1 0.145 104.5 108.8 -94.7 21.3 -10.1 2.9 2.0 57 68 A K T <4 S+ 0 0 155 -3,-0.8 2,-0.5 1,-0.2 -1,-0.2 0.929 85.1 33.4 -63.4 -41.8 -13.4 1.4 3.2 58 69 A I S < S+ 0 0 108 -4,-0.7 -5,-0.9 -3,-0.5 2,-0.4 -0.957 73.5 170.5-118.4 126.1 -12.3 -2.1 2.1 59 70 A F E -C 52 0A 14 -2,-0.5 2,-0.4 -7,-0.2 -7,-0.2 -0.997 5.9-178.7-136.1 135.4 -8.6 -3.1 2.3 60 71 A S E +C 51 0A 76 -9,-2.7 -9,-3.4 -2,-0.4 2,-0.3 -0.985 7.1 165.3-134.5 144.5 -7.0 -6.5 1.8 61 72 A S E -C 50 0A 33 -2,-0.4 -11,-0.2 -11,-0.2 -13,-0.1 -0.978 38.9 -86.7-152.7 164.1 -3.4 -7.7 2.0 62 73 A S > - 0 0 41 -13,-1.7 4,-1.7 -2,-0.3 5,-0.1 -0.164 42.3-108.6 -68.1 167.4 -1.3 -10.9 2.3 63 74 A E H > S+ 0 0 160 1,-0.2 4,-1.9 2,-0.2 5,-0.2 0.888 120.9 54.1 -66.5 -36.6 -0.5 -12.5 5.7 64 75 A E H 4 S+ 0 0 78 1,-0.2 4,-0.3 2,-0.2 -1,-0.2 0.852 115.9 38.7 -66.8 -32.2 3.2 -11.3 5.4 65 76 A L H > S+ 0 0 0 -18,-0.2 4,-0.6 -16,-0.2 -1,-0.2 0.666 110.0 62.5 -90.5 -17.9 2.0 -7.7 4.9 66 77 A D H >< S+ 0 0 93 -4,-1.7 3,-1.1 1,-0.2 -2,-0.2 0.913 97.6 54.7 -73.2 -42.3 -0.9 -8.1 7.4 67 78 A K T 3< S+ 0 0 159 -4,-1.9 -1,-0.2 1,-0.3 -2,-0.1 0.760 96.0 70.0 -63.8 -21.3 1.5 -8.7 10.4 68 79 A M T 34 S+ 0 0 48 -4,-0.3 -1,-0.3 -5,-0.2 -2,-0.2 0.877 79.5 90.7 -64.5 -35.4 3.2 -5.4 9.4 69 80 A F << + 0 0 31 -3,-1.1 -51,-0.1 -4,-0.6 -52,-0.1 -0.415 46.9 173.6 -64.3 132.8 0.2 -3.5 10.6 70 81 A Q + 0 0 150 -53,-0.9 -1,-0.2 -2,-0.1 -52,-0.1 0.540 64.7 54.8-113.2 -17.0 0.4 -2.5 14.3 71 82 A E S S- 0 0 110 -54,-0.4 3,-0.1 1,-0.1 -1,-0.1 -0.870 91.8 -98.5-119.1 153.6 -2.7 -0.4 14.4 72 83 A P - 0 0 88 0, 0.0 2,-0.1 0, 0.0 -2,-0.1 -0.181 50.2 -86.5 -65.3 157.3 -6.4 -1.2 13.4 73 84 A R - 0 0 173 -4,-0.1 2,-0.3 -14,-0.1 -16,-0.0 -0.389 50.2-178.7 -67.4 141.6 -7.8 -0.1 10.0 74 85 A K - 0 0 88 -3,-0.1 -57,-0.1 -2,-0.1 -3,-0.0 -0.985 29.7-100.7-141.3 150.5 -9.3 3.4 9.8 75 86 A G > - 0 0 32 -2,-0.3 4,-2.1 1,-0.1 5,-0.3 -0.260 32.9-114.5 -67.7 158.7 -10.9 5.4 7.0 76 87 A Y H > S+ 0 0 53 1,-0.2 4,-2.1 2,-0.2 5,-0.2 0.924 119.1 48.1 -60.4 -44.1 -9.0 8.1 5.1 77 88 A D H > S+ 0 0 89 2,-0.2 4,-2.5 1,-0.2 5,-0.3 0.870 107.7 57.1 -66.3 -34.6 -11.1 10.9 6.5 78 89 A E H > S+ 0 0 105 2,-0.2 4,-2.3 1,-0.2 5,-0.4 0.959 111.1 40.8 -62.6 -49.5 -10.7 9.4 10.0 79 90 A I H < S+ 0 0 28 -4,-2.1 -1,-0.2 2,-0.2 -2,-0.2 0.892 113.8 54.8 -66.9 -37.5 -6.9 9.6 9.9 80 91 A L H < S+ 0 0 106 -4,-2.1 -2,-0.2 -5,-0.3 -1,-0.2 0.934 112.6 42.1 -62.5 -44.2 -7.0 13.0 8.2 81 92 A E H >< S- 0 0 100 -4,-2.5 3,-3.0 -5,-0.2 -2,-0.2 0.896 80.6-171.3 -70.6 -38.2 -9.2 14.5 11.0 82 93 A H T 3< - 0 0 147 -4,-2.3 -3,-0.1 1,-0.3 3,-0.1 0.791 66.0 -82.5 51.8 24.0 -7.2 12.8 13.7 83 94 A H T 3 S+ 0 0 174 -5,-0.4 2,-0.6 1,-0.2 -1,-0.3 0.729 97.2 140.3 55.8 16.3 -10.0 14.0 16.0 84 95 A H < + 0 0 145 -3,-3.0 2,-0.3 -4,-0.1 -1,-0.2 -0.801 18.0 136.6 -94.9 122.7 -8.0 17.2 15.9 85 96 A H - 0 0 123 -2,-0.6 2,-0.2 -3,-0.1 -4,-0.0 -0.969 54.8 -83.7-155.4 168.4 -10.2 20.4 15.8 86 97 A H 0 0 152 -2,-0.3 0, 0.0 1,-0.1 0, 0.0 -0.504 360.0 360.0 -78.9 147.4 -10.5 23.9 17.3 87 98 A H 0 0 224 -2,-0.2 -1,-0.1 0, 0.0 0, 0.0 -0.396 360.0 360.0-154.7 360.0 -12.3 24.3 20.7