==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE 15-MAY-08 2K3R . COMPND 2 MOLECULE: RIBONUCLEASE P PROTEIN COMPONENT 4; . SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS FURIOSUS; . AUTHOR C.D.AMERO,M.P.FOSTER,W.P.BOOMERSHINE,Y.XU . 91 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7536.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 60 65.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 16 17.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 5.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 3.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 33 36.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 15 A K > 0 0 177 0, 0.0 4,-1.1 0, 0.0 3,-0.3 0.000 360.0 360.0 360.0-116.9 -18.5 -18.8 3.4 2 16 A E H > + 0 0 163 1,-0.2 4,-2.4 2,-0.2 3,-0.4 0.914 360.0 65.5 -66.1 -33.7 -19.9 -19.2 -0.1 3 17 A R H > S+ 0 0 159 1,-0.3 4,-2.0 2,-0.2 -1,-0.2 0.835 101.5 45.6 -60.4 -43.9 -22.9 -17.0 0.9 4 18 A I H > S+ 0 0 8 -3,-0.3 4,-2.3 2,-0.2 -1,-0.3 0.846 110.1 56.0 -63.3 -43.2 -20.8 -13.9 1.4 5 19 A D H X S+ 0 0 85 -4,-1.1 4,-2.1 -3,-0.4 -2,-0.2 0.913 107.3 48.2 -62.6 -39.4 -19.0 -14.5 -1.9 6 20 A I H X S+ 0 0 105 -4,-2.4 4,-2.5 1,-0.2 -2,-0.2 0.953 113.4 47.5 -65.0 -43.8 -22.3 -14.6 -3.8 7 21 A L H X S+ 0 0 26 -4,-2.0 4,-2.6 1,-0.2 -1,-0.2 0.821 109.6 54.5 -62.5 -40.6 -23.5 -11.4 -2.1 8 22 A F H X S+ 0 0 26 -4,-2.3 4,-1.8 2,-0.2 -1,-0.2 0.890 108.9 47.3 -59.9 -46.2 -20.1 -9.8 -2.9 9 23 A S H X S+ 0 0 67 -4,-2.1 4,-1.5 2,-0.2 -2,-0.2 0.938 114.2 47.4 -61.5 -44.2 -20.4 -10.6 -6.6 10 24 A L H X S+ 0 0 89 -4,-2.5 4,-2.0 1,-0.2 5,-0.2 0.889 110.5 52.0 -63.0 -41.5 -24.0 -9.2 -6.6 11 25 A A H X S+ 0 0 0 -4,-2.6 4,-1.3 1,-0.2 -1,-0.2 0.845 107.0 55.0 -62.5 -37.0 -22.8 -6.1 -4.7 12 26 A E H < S+ 0 0 107 -4,-1.8 -1,-0.2 2,-0.2 -2,-0.2 0.817 108.1 46.4 -65.5 -43.4 -20.1 -5.7 -7.4 13 27 A R H X S+ 0 0 186 -4,-1.5 4,-0.8 -3,-0.2 -2,-0.2 0.894 117.0 42.9 -66.1 -43.9 -22.5 -5.6 -10.3 14 28 A V H X S+ 0 0 13 -4,-2.0 4,-3.3 1,-0.2 8,-0.4 0.733 100.5 77.1 -64.6 -34.2 -25.0 -3.2 -8.7 15 29 A F H < S+ 0 0 3 -4,-1.3 7,-0.2 1,-0.3 -1,-0.2 0.941 103.1 30.6 -53.2 -58.5 -22.1 -1.1 -7.5 16 30 A P H 4 S+ 0 0 83 0, 0.0 -1,-0.3 0, 0.0 -2,-0.2 0.730 117.9 61.8 -62.5 -31.3 -21.2 0.7 -10.8 17 31 A Y H < S- 0 0 162 -4,-0.8 -2,-0.2 1,-0.3 -3,-0.1 0.968 130.8 -17.5 -62.6 -46.8 -24.9 0.4 -11.7 18 32 A S X - 0 0 31 -4,-3.3 4,-2.4 1,-0.1 3,-0.3 -0.862 52.1-152.2-163.5 115.1 -26.1 2.5 -8.7 19 33 A P H > S+ 0 0 31 0, 0.0 4,-2.8 0, 0.0 5,-0.1 0.930 100.6 54.4 -53.9 -40.0 -24.1 3.4 -5.5 20 34 A E H > S+ 0 0 137 2,-0.2 4,-1.4 1,-0.2 -5,-0.1 0.821 109.4 44.9 -67.4 -42.2 -27.3 3.7 -3.6 21 35 A L H > S+ 0 0 69 -3,-0.3 4,-2.1 -7,-0.2 -1,-0.2 0.949 113.2 52.0 -63.6 -41.8 -28.5 0.2 -4.6 22 36 A A H X S+ 0 0 0 -4,-2.4 4,-2.9 -8,-0.4 5,-0.3 0.886 101.7 61.2 -63.6 -35.7 -25.1 -1.2 -3.8 23 37 A K H X S+ 0 0 73 -4,-2.8 4,-2.2 1,-0.3 3,-0.3 0.941 106.8 45.0 -59.5 -45.6 -25.2 0.5 -0.4 24 38 A R H X S+ 0 0 172 -4,-1.4 4,-1.7 1,-0.2 -1,-0.3 0.910 114.8 48.6 -63.6 -43.3 -28.2 -1.6 0.4 25 39 A Y H X S+ 0 0 108 -4,-2.1 4,-1.5 1,-0.2 -1,-0.2 0.751 111.6 48.2 -63.9 -42.7 -26.6 -4.8 -1.0 26 40 A V H X S+ 0 0 0 -4,-2.9 4,-3.2 -3,-0.3 5,-0.3 0.878 105.0 58.0 -64.0 -43.7 -23.3 -4.3 0.8 27 41 A E H X S+ 0 0 71 -4,-2.2 4,-2.4 26,-0.3 5,-0.2 0.942 108.2 49.4 -59.3 -35.9 -25.0 -3.7 4.2 28 42 A L H X S+ 0 0 72 -4,-1.7 4,-2.6 2,-0.2 -1,-0.2 0.921 110.6 48.9 -61.8 -44.0 -26.6 -7.1 3.6 29 43 A A H X S+ 0 0 0 -4,-1.5 4,-1.8 1,-0.2 -2,-0.2 0.900 114.2 45.1 -66.4 -42.6 -23.2 -8.6 2.8 30 44 A L H X S+ 0 0 16 -4,-3.2 4,-1.9 2,-0.2 -1,-0.2 0.831 111.8 52.0 -64.1 -41.1 -21.6 -7.1 6.0 31 45 A L H X S+ 0 0 76 -4,-2.4 4,-2.3 -5,-0.3 -2,-0.2 0.943 111.1 48.7 -62.9 -41.0 -24.6 -8.1 8.1 32 46 A V H X S+ 0 0 4 -4,-2.6 4,-2.8 1,-0.2 5,-0.3 0.886 107.0 56.4 -61.4 -44.1 -24.1 -11.6 6.8 33 47 A Q H X>S+ 0 0 41 -4,-1.8 5,-1.4 2,-0.2 4,-0.6 0.902 111.3 41.1 -60.9 -45.5 -20.4 -11.5 7.6 34 48 A Q H <5S+ 0 0 125 -4,-1.9 3,-0.2 2,-0.2 -1,-0.2 0.914 115.5 51.2 -66.6 -41.4 -20.9 -10.7 11.3 35 49 A K H <5S+ 0 0 155 -4,-2.3 -2,-0.2 1,-0.3 -1,-0.2 0.855 113.3 43.9 -64.0 -42.3 -23.8 -13.1 11.6 36 50 A A H <5S- 0 0 43 -4,-2.8 -1,-0.3 -5,-0.2 -2,-0.2 0.599 103.6-142.5 -73.5 -13.5 -21.7 -15.9 10.0 37 51 A K T <5 + 0 0 192 -4,-0.6 2,-0.4 -5,-0.3 -3,-0.2 0.800 47.6 145.7 51.0 47.9 -18.9 -14.7 12.3 38 52 A V < - 0 0 40 -5,-1.4 2,-0.5 -37,-0.0 -1,-0.2 -0.846 42.4-144.3-118.2 130.2 -16.3 -15.4 9.6 39 53 A K - 0 0 187 -2,-0.4 -5,-0.0 -5,-0.0 -6,-0.0 -0.873 18.3-168.0 -89.7 132.0 -13.2 -13.3 9.1 40 54 A I - 0 0 38 -2,-0.5 5,-0.2 1,-0.2 4,-0.1 -0.809 26.5-108.0-118.5 158.0 -12.1 -12.8 5.4 41 55 A P S S- 0 0 101 0, 0.0 -1,-0.2 0, 0.0 4,-0.1 0.931 78.2 -45.3 -54.5-101.9 -8.8 -11.4 4.2 42 56 A R S > S+ 0 0 174 3,-0.1 4,-1.5 2,-0.1 5,-0.1 0.328 108.6 103.5-106.1 -3.5 -9.1 -7.9 2.6 43 57 A K T 4 S+ 0 0 103 1,-0.2 -1,-0.1 2,-0.2 0, 0.0 0.764 101.7 3.6 -63.4 -45.4 -12.2 -8.6 0.5 44 58 A W T >4 S+ 0 0 2 -4,-0.1 3,-0.8 11,-0.1 -1,-0.2 0.663 128.5 60.1-101.8 -32.4 -14.8 -6.8 2.6 45 59 A K T 34 S+ 0 0 93 1,-0.3 3,-0.3 -5,-0.2 -2,-0.2 0.764 117.1 30.3 -64.5 -43.7 -12.7 -5.3 5.4 46 60 A R T 3< S+ 0 0 156 -4,-1.5 -1,-0.3 1,-0.1 -3,-0.1 0.328 115.0 63.0 -95.6 -3.0 -10.6 -3.2 3.1 47 61 A R S < S+ 0 0 114 -3,-0.8 9,-1.6 -5,-0.1 2,-0.3 -0.137 90.7 74.3-119.5 41.6 -13.2 -2.6 0.4 48 62 A Y B S-A 55 0A 89 7,-0.3 2,-0.3 -3,-0.3 7,-0.2 -0.945 75.2-101.0-149.6 163.6 -16.0 -0.7 2.2 49 63 A C > - 0 0 2 5,-1.2 4,-1.3 -2,-0.3 5,-0.1 -0.706 30.6-124.1 -82.8 151.4 -17.1 2.6 3.7 50 64 A K T 4 S+ 0 0 169 -2,-0.3 -1,-0.1 1,-0.2 -2,-0.0 0.772 105.0 6.2 -63.4 -39.8 -16.9 3.3 7.4 51 65 A K T 4 S+ 0 0 129 3,-0.1 -1,-0.2 0, 0.0 -2,-0.0 0.547 126.0 59.8-121.6 -19.9 -20.6 4.2 7.8 52 66 A C T 4 S- 0 0 4 2,-0.1 -25,-0.2 -26,-0.0 -2,-0.2 0.687 84.7-145.7 -71.2 -36.2 -22.1 3.5 4.3 53 67 A H < + 0 0 58 -4,-1.3 -26,-0.3 1,-0.2 2,-0.3 0.972 53.5 137.8 65.6 47.7 -21.2 -0.1 4.5 54 68 A A - 0 0 0 -28,-0.2 -5,-1.2 -5,-0.1 -1,-0.2 -0.975 64.8 -86.5-130.1 152.2 -20.7 0.2 0.7 55 69 A F B -A 48 0A 12 -2,-0.3 2,-0.8 -7,-0.2 -7,-0.3 -0.069 42.0-137.4 -65.6 130.2 -18.1 -1.2 -1.6 56 70 A L + 0 0 39 -9,-1.6 -1,-0.1 4,-0.1 -8,-0.1 -0.839 45.4 134.8 -95.8 108.3 -15.1 1.2 -1.9 57 71 A V >>> - 0 0 48 -2,-0.8 3,-1.2 -10,-0.0 4,-0.7 -0.996 53.0-117.3-135.2 136.0 -13.7 1.8 -5.3 58 72 A P B 345S+b 62 0B 72 0, 0.0 5,-0.3 0, 0.0 20,-0.1 -0.487 98.1 27.2 -62.4 143.5 -12.8 5.3 -6.7 59 73 A G T 345S+ 0 0 64 3,-2.9 4,-0.2 -2,-0.2 0, 0.0 0.192 116.9 61.1 95.2 -16.7 -14.9 6.4 -9.7 60 74 A I T <45S- 0 0 60 -3,-1.2 -1,-0.1 2,-0.7 3,-0.1 0.791 126.1 -10.2-109.6 -74.4 -17.9 4.3 -8.9 61 75 A N T <5S+ 0 0 0 -4,-0.7 18,-2.2 -6,-0.2 19,-0.6 0.236 139.3 29.0-101.5 -2.6 -19.7 5.1 -5.5 62 76 A A E >> -CD 62 83B 1 5,-1.7 4,-3.1 -2,-0.6 3,-1.4 -0.865 12.1-145.7-111.3 127.9 -18.1 8.3 -1.2 79 93 A L T 345S+ 0 0 117 -18,-2.2 -1,-0.1 -2,-0.6 -17,-0.1 0.763 92.9 60.1 -63.1 -40.5 -21.6 9.3 -2.3 80 94 A E T 345S+ 0 0 48 -19,-0.6 -1,-0.3 1,-0.3 -18,-0.1 0.813 119.1 30.4 -64.6 -38.2 -23.6 7.2 0.1 81 95 A C T <45S- 0 0 21 -3,-1.4 -1,-0.3 2,-0.2 -2,-0.2 0.795 96.9-144.8 -78.1 -34.8 -22.0 9.0 3.1 82 96 A G T <5 + 0 0 53 -4,-3.1 2,-0.3 1,-0.3 -3,-0.2 0.727 59.2 124.2 78.3 13.8 -21.7 12.2 1.0 83 97 A H E < -D 78 0B 103 -5,-1.0 -5,-1.7 -7,-0.0 2,-0.4 -0.854 62.0-124.0-118.0 148.8 -18.4 12.8 2.9 84 98 A I E -D 77 0B 96 -2,-0.3 2,-0.4 -7,-0.2 -7,-0.2 -0.743 23.6-165.4 -93.9 130.2 -14.8 13.3 2.0 85 99 A M E -D 76 0B 60 -9,-2.4 -9,-3.8 -2,-0.4 2,-0.5 -0.990 9.6-143.0-113.8 139.8 -12.1 11.0 3.4 86 100 A R E -D 75 0B 211 -2,-0.4 -11,-0.2 -11,-0.2 -13,-0.0 -0.854 11.7-172.0-102.6 136.4 -8.4 11.6 3.5 87 101 A Y E -D 74 0B 154 -13,-2.8 -13,-2.2 -2,-0.5 2,-0.2 -0.956 13.2-152.3-125.3 100.6 -5.9 8.9 3.0 88 102 A P E -D 73 0B 84 0, 0.0 2,-0.3 0, 0.0 -15,-0.2 -0.561 17.2-176.5 -62.1 143.8 -2.2 9.9 3.6 89 103 A Y - 0 0 142 -17,-2.2 2,-0.4 -2,-0.2 -2,-0.0 -0.952 13.8-153.0-141.2 152.2 0.4 8.0 1.7 90 104 A I 0 0 127 -2,-0.3 -20,-0.0 1,-0.3 -19,-0.0 -1.000 360.0 360.0-129.1 131.0 4.3 8.0 1.6 91 105 A K 0 0 198 -2,-0.4 -1,-0.3 0, 0.0 -20,-0.0 0.954 360.0 360.0 63.7 360.0 6.6 7.0 -1.3