==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 19-MAY-08 2K3V . COMPND 2 MOLECULE: TETRAHEME CYTOCHROME C-TYPE; . SOURCE 2 ORGANISM_SCIENTIFIC: SHEWANELLA FRIGIDIMARINA; . AUTHOR V.B.PAIXAO,D.L.TURNER,C.A.SALGUEIRO,L.BRENNAN,G.A.REID, . 86 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6777.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 36 41.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 2 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 4.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 12 14.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 15 17.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 158 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 66.1 15.0 -12.2 6.8 2 2 A D - 0 0 76 66,-0.0 2,-0.3 68,-0.0 68,-0.1 -0.736 360.0-131.4 -97.1 144.5 12.3 -10.5 4.8 3 3 A E - 0 0 76 -2,-0.3 66,-1.8 1,-0.1 5,-0.1 -0.741 27.5-104.2 -96.9 143.0 12.8 -7.2 3.0 4 4 A T B > -A 68 0A 44 -2,-0.3 4,-2.4 64,-0.3 64,-0.3 -0.094 27.2-115.6 -58.3 161.3 10.4 -4.3 3.3 5 5 A L H > S+ 0 0 42 62,-0.9 4,-2.1 59,-0.7 5,-0.2 0.901 118.1 56.8 -66.0 -42.4 8.0 -3.5 0.5 6 6 A A H > S+ 0 0 19 58,-1.0 4,-1.4 61,-0.2 -1,-0.2 0.800 109.7 48.9 -58.4 -29.2 9.7 -0.2 -0.1 7 7 A E H > S+ 0 0 88 57,-0.3 4,-2.6 2,-0.2 5,-0.4 0.968 105.1 53.1 -74.2 -57.7 12.9 -2.2 -0.5 8 8 A F H < S+ 0 0 88 -4,-2.4 4,-0.3 1,-0.3 -2,-0.2 0.832 114.4 45.5 -45.8 -38.2 11.6 -4.8 -3.0 9 9 A H H >< S+ 0 0 41 -4,-2.1 3,-0.7 2,-0.2 5,-0.4 0.864 108.6 56.7 -74.2 -38.2 10.4 -1.9 -5.1 10 10 A V H >< S+ 0 0 51 -4,-1.4 3,-3.7 1,-0.3 -2,-0.2 0.961 102.5 52.8 -56.5 -56.2 13.7 -0.1 -4.6 11 11 A E T 3< S+ 0 0 161 -4,-2.6 -1,-0.3 1,-0.3 -2,-0.2 0.705 109.7 52.9 -52.9 -19.7 15.7 -3.0 -6.0 12 12 A M T < S- 0 0 111 -3,-0.7 -1,-0.3 -5,-0.4 -2,-0.2 0.119 144.7 -28.4-102.6 18.2 13.3 -2.6 -8.9 13 13 A G S < S- 0 0 65 -3,-3.7 2,-0.3 -5,-0.0 -3,-0.2 -0.302 92.4 -98.6 173.6 -77.2 14.1 1.0 -9.3 14 14 A G > - 0 0 10 -5,-0.4 3,-1.3 -8,-0.1 -2,-0.1 -0.967 52.6 -53.2 158.4-168.1 15.2 3.0 -6.3 15 15 A C G > S+ 0 0 80 -2,-0.3 3,-1.0 1,-0.3 -1,-0.1 0.674 126.0 69.0 -72.8 -17.4 14.0 5.3 -3.5 16 16 A E G 3 S+ 0 0 131 1,-0.2 -1,-0.3 2,-0.2 5,-0.1 0.263 71.0 94.8 -83.5 11.6 12.6 7.5 -6.3 17 17 A N G < S+ 0 0 52 -3,-1.3 -1,-0.2 1,-0.2 -2,-0.1 0.757 112.6 3.5 -72.2 -25.5 10.1 4.7 -6.9 18 18 A C S < S+ 0 0 40 -3,-1.0 2,-0.3 -4,-0.1 -1,-0.2 0.009 126.4 75.9-147.4 25.4 7.7 6.7 -4.8 19 19 A H - 0 0 40 5,-0.1 2,-0.6 -5,-0.1 3,-0.2 -0.996 66.9-138.9-145.1 136.8 9.8 9.7 -4.0 20 20 A A S S- 0 0 38 3,-0.4 3,-0.4 -2,-0.3 -3,-0.1 -0.864 85.6 -27.8 -99.9 121.2 10.6 12.8 -6.1 21 21 A D S S- 0 0 150 -2,-0.6 -1,-0.2 1,-0.3 -5,-0.1 0.827 123.0 -59.2 42.9 36.9 14.2 14.0 -5.8 22 22 A G S S+ 0 0 48 -3,-0.2 -1,-0.3 1,-0.1 -6,-0.1 0.969 106.7 129.4 57.8 59.2 14.0 12.4 -2.4 23 23 A E - 0 0 125 -3,-0.4 -3,-0.4 -7,-0.0 -1,-0.1 -0.580 47.4-151.7-145.8 75.5 11.1 14.6 -1.2 24 24 A P - 0 0 64 0, 0.0 -5,-0.1 0, 0.0 6,-0.0 -0.181 30.9-104.0 -47.5 133.4 8.3 12.5 0.3 25 25 A S - 0 0 34 1,-0.1 0, 0.0 3,-0.1 0, 0.0 -0.114 16.8-134.1 -59.3 161.1 4.9 14.2 -0.2 26 26 A K S S+ 0 0 194 -3,-0.1 -1,-0.1 1,-0.0 0, 0.0 -0.224 97.7 35.2-111.2 39.7 3.3 15.8 2.8 27 27 A D S S- 0 0 105 0, 0.0 -1,-0.0 0, 0.0 -2,-0.0 0.309 92.8-124.1-149.4 -62.0 -0.1 14.3 2.2 28 28 A G S > S+ 0 0 13 31,-0.0 4,-2.9 32,-0.0 5,-0.1 -0.014 90.5 89.0 127.1 -26.5 0.0 10.8 0.8 29 29 A A H > S+ 0 0 43 2,-0.2 4,-1.6 1,-0.2 -4,-0.0 0.953 83.3 57.3 -64.1 -51.6 -2.0 11.4 -2.3 30 30 A Y H > S+ 0 0 109 1,-0.2 4,-0.7 2,-0.2 3,-0.3 0.880 113.6 40.6 -46.2 -45.9 1.0 12.3 -4.4 31 31 A E H >> S+ 0 0 40 1,-0.2 3,-1.6 2,-0.2 4,-1.1 0.945 105.1 62.9 -69.4 -50.6 2.5 9.0 -3.5 32 32 A F H 3< S+ 0 0 46 -4,-2.9 -1,-0.2 1,-0.3 -2,-0.2 0.738 98.9 61.1 -45.4 -25.1 -0.7 7.0 -3.8 33 33 A E H >< S+ 0 0 97 -4,-1.6 3,-0.7 -3,-0.3 -1,-0.3 0.911 92.7 60.5 -69.9 -44.6 -0.4 8.2 -7.4 34 34 A Q H << S+ 0 0 91 -3,-1.6 2,-1.0 -4,-0.7 4,-0.4 0.817 96.4 63.9 -51.7 -33.1 2.9 6.4 -8.0 35 35 A C T 3< S+ 0 0 37 -4,-1.1 5,-0.3 1,-0.2 -1,-0.3 -0.278 87.0 82.3 -87.7 47.9 1.0 3.2 -7.1 36 36 A Q S < S+ 0 0 73 -2,-1.0 -1,-0.2 -3,-0.7 5,-0.1 -0.387 84.8 40.9-150.2 62.7 -1.2 3.7 -10.2 37 37 A S S S+ 0 0 99 3,-0.1 -2,-0.1 -3,-0.1 4,-0.1 0.033 110.2 40.6-164.0 -73.2 0.7 2.4 -13.3 38 38 A C S S+ 0 0 122 -4,-0.4 -3,-0.1 2,-0.1 -4,-0.0 0.608 138.3 20.3 -68.4 -10.7 2.6 -0.8 -12.9 39 39 A H S S- 0 0 130 1,-0.1 2,-0.3 0, 0.0 -3,-0.1 0.579 94.9-141.8-117.5 -88.2 -0.5 -1.9 -10.9 40 40 A G - 0 0 23 -5,-0.3 2,-0.3 5,-0.0 -1,-0.1 -0.991 35.0 -37.3 153.0-152.2 -3.7 0.1 -11.4 41 41 A S > - 0 0 37 -2,-0.3 3,-2.6 1,-0.1 8,-0.1 -0.827 41.3-124.9-110.9 149.4 -6.6 1.4 -9.4 42 42 A L G > S+ 0 0 12 -2,-0.3 3,-2.1 1,-0.3 11,-0.2 0.841 115.3 62.0 -57.1 -34.5 -8.4 -0.3 -6.4 43 43 A A G 3 S+ 0 0 37 1,-0.3 -1,-0.3 7,-0.1 7,-0.1 0.568 104.4 50.4 -68.1 -7.7 -11.6 0.1 -8.4 44 44 A E G < S+ 0 0 159 -3,-2.6 -1,-0.3 5,-0.1 -2,-0.2 0.020 102.8 79.7-117.1 23.3 -9.8 -2.2 -10.9 45 45 A M S < S- 0 0 62 -3,-2.1 5,-0.1 1,-0.4 -3,-0.0 -0.494 92.0 -51.5-117.8-172.3 -8.8 -4.8 -8.4 46 46 A D > - 0 0 84 -2,-0.2 4,-1.6 1,-0.1 -1,-0.4 0.161 63.1 -95.5 -50.3 178.4 -10.4 -7.7 -6.6 47 47 A D T 4 S+ 0 0 120 1,-0.2 -1,-0.1 2,-0.2 -4,-0.0 0.335 125.7 59.6 -82.1 6.9 -13.7 -7.3 -4.8 48 48 A N T > S+ 0 0 75 2,-0.1 4,-0.5 3,-0.1 -1,-0.2 0.740 107.2 40.6-101.6 -34.6 -11.6 -6.8 -1.7 49 49 A H H > S+ 0 0 52 -3,-0.2 4,-3.5 2,-0.2 3,-0.2 0.784 110.2 61.3 -83.0 -30.8 -9.6 -3.8 -2.9 50 50 A K H < S+ 0 0 86 -4,-1.6 -3,-0.1 2,-0.2 -2,-0.1 0.992 94.3 58.9 -56.1 -68.0 -12.6 -2.2 -4.5 51 51 A P H 4 S+ 0 0 87 0, 0.0 -1,-0.2 0, 0.0 -2,-0.2 0.766 117.5 36.2 -30.0 -43.7 -14.7 -1.9 -1.3 52 52 A H H < S+ 0 0 66 -4,-0.5 -2,-0.2 -3,-0.2 4,-0.1 0.923 84.1 120.8 -79.9 -49.7 -11.8 0.3 -0.1 53 53 A D S < S+ 0 0 55 -4,-3.5 4,-0.1 1,-0.2 -3,-0.0 0.206 83.6 24.8 -19.2 106.5 -11.0 1.9 -3.4 54 54 A G S S+ 0 0 65 2,-0.3 -1,-0.2 0, 0.0 3,-0.1 0.894 114.4 65.5 91.5 52.9 -11.5 5.5 -2.4 55 55 A L S S+ 0 0 143 1,-0.4 2,-0.3 0, 0.0 -2,-0.1 0.160 99.8 17.1-158.5 -66.3 -10.9 5.4 1.3 56 56 A L S S- 0 0 47 -4,-0.1 -1,-0.4 1,-0.0 -2,-0.3 -0.925 74.4-114.2-125.6 150.0 -7.3 4.5 2.3 57 57 A M > - 0 0 49 -2,-0.3 4,-0.6 -3,-0.1 5,-0.1 -0.185 30.5-107.1 -74.8 171.1 -4.1 4.5 0.3 58 58 A C H >> S+ 0 0 23 2,-0.2 3,-4.1 1,-0.2 4,-3.7 0.998 119.5 44.9 -61.0 -69.6 -2.1 1.4 -0.5 59 59 A A H 34 S+ 0 0 39 1,-0.3 -1,-0.2 2,-0.3 4,-0.1 0.887 100.7 69.6 -39.3 -53.2 0.8 2.0 1.9 60 60 A D H 34 S+ 0 0 93 1,-0.2 -1,-0.3 2,-0.2 -2,-0.2 0.778 122.1 17.8 -36.9 -32.1 -1.8 2.9 4.5 61 61 A C H << S+ 0 0 54 -3,-4.1 2,-1.4 -4,-0.6 -2,-0.3 0.783 129.4 50.1-106.6 -51.4 -2.5 -0.8 4.2 62 62 A H S < S- 0 0 66 -4,-3.7 -2,-0.2 -5,-0.1 -3,-0.2 -0.364 85.5-156.5 -87.2 55.1 0.7 -2.1 2.5 63 63 A A > - 0 0 38 -2,-1.4 4,-3.1 -3,-0.2 3,-0.6 -0.055 12.3-174.2 -38.1 96.6 2.9 -0.3 5.0 64 64 A P T 4 S+ 0 0 34 0, 0.0 2,-2.1 0, 0.0 -58,-1.0 0.963 78.8 52.0 -63.8 -56.8 6.0 -0.1 2.8 65 65 A H T 4 S+ 0 0 126 1,-0.2 -2,-0.1 -60,-0.1 3,-0.1 -0.368 130.8 15.8 -81.4 58.3 8.3 1.4 5.4 66 66 A E T 4 S+ 0 0 158 -2,-2.1 -1,-0.2 1,-0.7 -3,-0.1 -0.112 106.2 81.0 175.8 -60.7 7.3 -1.4 7.8 67 67 A A < - 0 0 11 -4,-3.1 -62,-0.9 -63,-0.1 -1,-0.7 -0.068 67.1-135.6 -62.6 169.7 5.6 -4.3 6.2 68 68 A K B -A 4 0A 98 -64,-0.3 -64,-0.3 -63,-0.1 -1,-0.1 -1.000 30.8 -88.5-136.0 134.2 7.6 -7.0 4.4 69 69 A V S S+ 0 0 42 -66,-1.8 -66,-0.1 -2,-0.4 3,-0.1 -0.046 116.7 32.6 -38.6 131.0 7.0 -8.6 1.0 70 70 A G S S+ 0 0 80 1,-0.2 2,-0.4 -68,-0.1 -1,-0.2 0.832 89.0 121.8 83.9 36.9 4.8 -11.6 1.5 71 71 A E - 0 0 96 -3,-0.0 -1,-0.2 3,-0.0 -3,-0.1 -0.859 50.5-153.0-136.1 99.1 2.9 -10.1 4.5 72 72 A K - 0 0 166 -2,-0.4 13,-0.1 -3,-0.1 -10,-0.0 -0.608 29.4-117.3 -76.0 115.8 -0.9 -9.8 4.1 73 73 A P - 0 0 39 0, 0.0 2,-0.4 0, 0.0 -1,-0.1 -0.003 28.8-113.0 -46.0 156.0 -2.0 -6.9 6.3 74 74 A T > - 0 0 78 1,-0.1 3,-1.8 -13,-0.1 5,-0.1 -0.852 6.2-147.9-103.6 134.4 -4.4 -7.8 9.2 75 75 A C G >> S+ 0 0 33 -2,-0.4 4,-3.2 1,-0.3 3,-1.7 0.741 99.2 72.8 -66.9 -22.8 -8.0 -6.6 9.2 76 76 A D G 34 S+ 0 0 120 1,-0.3 -1,-0.3 2,-0.2 8,-0.0 0.591 81.8 72.9 -66.8 -9.4 -7.6 -6.5 13.0 77 77 A T G <4 S- 0 0 95 -3,-1.8 -1,-0.3 1,-0.0 -2,-0.2 0.217 127.0 -4.7 -88.7 13.7 -5.4 -3.5 12.3 78 78 A C T <4 S+ 0 0 102 -3,-1.7 2,-0.4 1,-0.6 -2,-0.2 0.129 125.7 64.8-165.2 -56.3 -8.6 -1.5 11.5 79 79 A H < - 0 0 72 -4,-3.2 -1,-0.6 -5,-0.1 3,-0.1 -0.696 47.3-179.1 -88.8 137.1 -11.6 -3.8 11.6 80 80 A D + 0 0 139 -2,-0.4 -1,-0.1 1,-0.1 -4,-0.1 -0.194 61.0 92.6-126.3 38.3 -12.5 -5.4 14.9 81 81 A D S S- 0 0 97 -6,-0.1 3,-0.1 3,-0.0 -1,-0.1 -0.011 114.0 -89.4-118.7 24.8 -15.5 -7.4 13.8 82 82 A G + 0 0 60 1,-0.2 -6,-0.1 -3,-0.1 -7,-0.1 0.319 67.7 175.6 83.8 -7.7 -13.6 -10.5 13.1 83 83 A R - 0 0 140 -8,-0.1 2,-0.3 1,-0.1 -1,-0.2 0.026 9.4-167.1 -33.2 126.6 -13.0 -9.3 9.6 84 84 A T - 0 0 117 -3,-0.1 2,-0.1 -9,-0.1 -1,-0.1 -0.871 22.3-102.0-124.4 157.5 -10.7 -11.8 7.9 85 85 A A 0 0 63 -2,-0.3 -11,-0.0 1,-0.1 -13,-0.0 -0.470 360.0 360.0 -77.0 148.5 -8.7 -11.7 4.7 86 86 A K 0 0 208 -2,-0.1 -1,-0.1 0, 0.0 -38,-0.0 0.474 360.0 360.0-119.1 360.0 -10.1 -13.6 1.6