==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 27-JUN-08 2K5E . COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: METHANOCOCCUS JANNASCHII; . AUTHOR G.LIU,L.ZHAO,C.CICCOSANTI,M.JIANG,R.XIAO,G.SWAPNA,R.NAIR, . 73 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5064.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 55 75.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 15 20.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 28 38.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 4.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 2 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 229 0, 0.0 2,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 113.7 -16.0 12.0 -1.7 2 2 A T - 0 0 138 4,-0.0 2,-0.4 2,-0.0 3,-0.0 -0.373 360.0-108.5 -98.1-179.3 -13.9 8.9 -2.6 3 3 A Q - 0 0 97 -2,-0.1 3,-0.0 1,-0.1 59,-0.0 -0.953 4.5-146.1-117.0 131.4 -10.2 8.1 -1.9 4 4 A K S S+ 0 0 130 -2,-0.4 2,-0.5 1,-0.2 -1,-0.1 0.721 99.6 49.9 -63.0 -22.3 -7.4 8.1 -4.5 5 5 A F S S+ 0 0 0 53,-0.1 2,-0.3 12,-0.0 -1,-0.2 -0.967 77.9 169.4-118.9 114.4 -6.0 5.2 -2.4 6 6 A T - 0 0 52 -2,-0.5 3,-0.5 4,-0.1 37,-0.4 -0.819 46.5-118.7-121.6 162.2 -8.4 2.4 -1.4 7 7 A K S S+ 0 0 72 -2,-0.3 37,-1.5 1,-0.2 38,-0.4 0.722 112.3 61.2 -68.6 -20.9 -8.2 -1.0 0.1 8 8 A D S S+ 0 0 127 34,-0.1 -1,-0.2 35,-0.1 34,-0.0 0.809 88.6 83.8 -77.7 -31.8 -9.6 -2.5 -3.1 9 9 A M S S- 0 0 21 -3,-0.5 34,-2.6 33,-0.1 35,-0.2 -0.288 82.5-107.9 -75.5 159.0 -6.8 -1.3 -5.4 10 10 A T B > -A 42 0A 25 32,-0.3 4,-2.1 33,-0.1 32,-0.3 -0.427 19.4-117.0 -86.1 159.5 -3.5 -3.2 -5.9 11 11 A F H > S+ 0 0 0 30,-2.3 4,-2.7 27,-0.7 5,-0.2 0.906 115.1 57.4 -58.2 -43.1 0.0 -2.3 -4.6 12 12 A A H > S+ 0 0 30 27,-2.4 4,-1.5 26,-0.2 -1,-0.2 0.882 108.6 45.7 -57.4 -41.2 1.3 -1.9 -8.2 13 13 A Q H > S+ 0 0 112 26,-0.4 4,-0.7 2,-0.2 -1,-0.2 0.915 111.6 51.9 -68.9 -42.8 -1.4 0.7 -9.0 14 14 A A H >X S+ 0 0 0 -4,-2.1 4,-1.9 1,-0.2 3,-1.1 0.939 108.5 50.6 -58.3 -49.0 -0.7 2.6 -5.7 15 15 A L H 3< S+ 0 0 32 -4,-2.7 -1,-0.2 1,-0.3 7,-0.2 0.882 111.4 48.0 -56.8 -41.4 3.0 2.8 -6.4 16 16 A Q H 3< S+ 0 0 173 -4,-1.5 -1,-0.3 -5,-0.2 -2,-0.2 0.555 108.0 57.3 -79.5 -8.3 2.4 4.2 -9.9 17 17 A T H << S+ 0 0 54 -3,-1.1 -2,-0.2 -4,-0.7 -1,-0.2 0.842 128.4 1.4 -86.5 -41.3 -0.1 6.7 -8.5 18 18 A H >< - 0 0 44 -4,-1.9 3,-2.3 -5,-0.1 4,-0.4 -0.866 58.5-151.3-149.0 115.8 2.5 8.3 -6.1 19 19 A P T >> S+ 0 0 112 0, 0.0 3,-1.5 0, 0.0 4,-0.6 0.816 96.9 69.1 -53.3 -32.2 6.2 7.3 -5.8 20 20 A G H 3> S+ 0 0 42 1,-0.3 4,-1.7 2,-0.2 3,-0.2 0.723 82.1 74.7 -60.3 -21.3 6.1 8.4 -2.1 21 21 A V H <> S+ 0 0 0 -3,-2.3 4,-3.1 -7,-0.2 -1,-0.3 0.862 86.8 61.9 -58.7 -36.1 3.8 5.4 -1.5 22 22 A A H <> S+ 0 0 39 -3,-1.5 4,-2.7 -4,-0.4 5,-0.2 0.921 103.8 47.8 -56.9 -46.2 6.9 3.1 -1.8 23 23 A G H X S+ 0 0 48 -4,-0.6 4,-2.2 -3,-0.2 -1,-0.2 0.920 113.1 47.7 -61.2 -45.4 8.5 4.9 1.2 24 24 A V H X S+ 0 0 15 -4,-1.7 4,-1.7 2,-0.2 6,-0.2 0.952 113.8 47.0 -59.8 -51.2 5.3 4.6 3.3 25 25 A L H <>S+ 0 0 2 -4,-3.1 5,-2.8 2,-0.2 6,-0.6 0.937 112.8 48.1 -58.0 -49.9 4.9 0.9 2.4 26 26 A R H ><5S+ 0 0 191 -4,-2.7 3,-1.3 4,-0.3 5,-0.3 0.880 111.1 51.8 -60.5 -37.6 8.6 -0.0 3.1 27 27 A S H 3<5S+ 0 0 99 -4,-2.2 -1,-0.2 1,-0.3 -2,-0.2 0.817 109.1 51.6 -65.2 -31.1 8.3 1.9 6.5 28 28 A Y T 3<5S- 0 0 52 -4,-1.7 -1,-0.3 -3,-0.3 -2,-0.2 0.102 122.8-106.6 -93.3 20.9 5.1 -0.2 7.2 29 29 A N T X 5S+ 0 0 102 -3,-1.3 3,-0.6 1,-0.1 -3,-0.2 0.525 95.4 114.0 68.6 5.0 7.0 -3.5 6.5 30 30 A L G > < + 0 0 0 -5,-2.8 3,-1.2 -6,-0.2 -4,-0.3 0.234 40.7 99.5 -90.6 14.6 5.1 -3.7 3.2 31 31 A G G > + 0 0 31 -6,-0.6 3,-1.3 -5,-0.3 4,-0.3 0.807 66.2 72.3 -69.2 -27.7 8.3 -3.3 1.1 32 32 A C G X> + 0 0 71 -3,-0.6 4,-2.6 1,-0.3 3,-0.7 0.540 67.8 98.8 -65.2 -6.0 8.5 -7.0 0.5 33 33 A I G <4>S+ 0 0 7 -3,-1.2 5,-1.8 1,-0.3 6,-0.7 0.792 79.6 54.1 -54.2 -31.0 5.5 -6.7 -1.9 34 34 A G G <45S+ 0 0 50 -3,-1.3 -1,-0.3 3,-0.2 -2,-0.2 0.880 113.9 39.6 -71.0 -37.9 7.9 -6.6 -4.8 35 35 A C T <45S+ 0 0 123 -3,-0.7 -2,-0.2 -4,-0.3 -1,-0.1 0.954 115.9 47.5 -76.9 -52.6 9.6 -9.9 -3.8 36 36 A M T <5S- 0 0 96 -4,-2.6 -1,-0.2 1,-0.1 -3,-0.2 0.504 113.5-116.7 -69.2 -2.5 6.5 -11.9 -2.7 37 37 A G T > 5 + 0 0 46 -5,-0.3 3,-0.8 -4,-0.3 -3,-0.2 0.774 67.8 144.6 72.3 27.8 4.8 -10.8 -5.9 38 38 A A G > < + 0 0 2 -5,-1.8 3,-1.6 -6,-0.3 -27,-0.7 0.333 39.8 101.4 -81.2 9.5 2.1 -8.8 -4.1 39 39 A Q G 3 S+ 0 0 57 -6,-0.7 -27,-2.4 1,-0.3 -26,-0.4 0.908 85.5 43.8 -57.8 -42.0 2.2 -6.2 -6.9 40 40 A N G < S+ 0 0 146 -3,-0.8 2,-0.3 -29,-0.1 -1,-0.3 0.242 101.9 97.1 -87.7 13.1 -1.0 -7.7 -8.4 41 41 A E S < S- 0 0 54 -3,-1.6 -30,-2.3 -8,-0.1 -29,-0.2 -0.793 80.0-106.3-108.9 146.3 -2.5 -7.9 -4.8 42 42 A S B > -A 10 0A 21 -2,-0.3 4,-1.8 -32,-0.3 3,-0.5 -0.359 28.7-115.9 -70.2 150.2 -5.0 -5.5 -3.1 43 43 A L H > S+ 0 0 1 -34,-2.6 4,-2.1 -37,-0.4 -36,-0.1 0.871 114.6 50.8 -53.3 -44.8 -3.7 -3.2 -0.3 44 44 A E H > S+ 0 0 73 -37,-1.5 4,-2.4 -35,-0.2 5,-0.3 0.869 106.8 55.1 -64.8 -35.7 -5.9 -4.8 2.4 45 45 A Q H > S+ 0 0 107 -3,-0.5 4,-1.7 -38,-0.4 -2,-0.2 0.946 112.5 40.7 -64.2 -49.7 -4.8 -8.3 1.4 46 46 A G H X S+ 0 0 0 -4,-1.8 4,-1.3 2,-0.2 -1,-0.2 0.853 112.3 58.8 -65.6 -34.8 -1.1 -7.5 1.9 47 47 A A H ><>S+ 0 0 0 -4,-2.1 5,-2.6 -5,-0.3 3,-0.9 0.975 108.9 40.8 -58.0 -59.3 -1.9 -5.5 5.0 48 48 A N H ><5S+ 0 0 107 -4,-2.4 3,-1.4 1,-0.3 -1,-0.2 0.853 109.7 61.5 -60.1 -34.4 -3.5 -8.4 6.9 49 49 A A H 3<5S+ 0 0 67 -4,-1.7 -1,-0.3 1,-0.3 -2,-0.2 0.828 111.2 39.1 -59.3 -32.9 -0.7 -10.7 5.6 50 50 A H T <<5S- 0 0 44 -4,-1.3 -1,-0.3 -3,-0.9 -2,-0.2 0.231 122.9-107.8-100.9 11.2 1.7 -8.4 7.5 51 51 A G T < 5S+ 0 0 65 -3,-1.4 2,-0.3 1,-0.2 -3,-0.3 0.851 76.7 127.9 68.3 37.0 -0.6 -8.0 10.5 52 52 A L < - 0 0 61 -5,-2.6 2,-0.6 -8,-0.1 -1,-0.2 -0.807 61.5-115.4-120.5 161.5 -1.6 -4.4 9.8 53 53 A N >> - 0 0 101 -2,-0.3 4,-1.2 1,-0.1 3,-0.7 -0.876 14.8-147.7 -98.5 123.8 -4.9 -2.5 9.4 54 54 A V H 3> S+ 0 0 2 -2,-0.6 4,-3.1 1,-0.2 5,-0.3 0.768 92.6 70.8 -61.1 -25.8 -5.4 -1.0 5.9 55 55 A E H 3> S+ 0 0 101 1,-0.2 4,-2.0 2,-0.2 -1,-0.2 0.941 99.9 43.9 -56.1 -51.8 -7.3 2.0 7.4 56 56 A D H <> S+ 0 0 76 -3,-0.7 4,-1.6 2,-0.2 -1,-0.2 0.853 114.3 52.2 -63.2 -35.2 -4.1 3.5 9.0 57 57 A I H X S+ 0 0 2 -4,-1.2 4,-2.6 2,-0.2 -2,-0.2 0.961 109.0 47.3 -65.2 -52.4 -2.3 2.8 5.7 58 58 A L H X S+ 0 0 7 -4,-3.1 4,-2.8 1,-0.2 5,-0.3 0.852 106.9 61.8 -57.5 -36.7 -4.9 4.5 3.5 59 59 A R H X S+ 0 0 113 -4,-2.0 4,-1.1 -5,-0.3 -1,-0.2 0.957 111.5 34.6 -52.0 -56.7 -4.8 7.4 6.0 60 60 A D H X S+ 0 0 44 -4,-1.6 4,-0.9 2,-0.2 -2,-0.2 0.862 117.6 53.7 -73.3 -36.4 -1.1 8.2 5.3 61 61 A L H >X S+ 0 0 0 -4,-2.6 3,-1.0 1,-0.2 4,-0.6 0.933 108.1 49.1 -62.9 -48.2 -1.2 7.3 1.6 62 62 A N H >X S+ 0 0 21 -4,-2.8 4,-1.7 1,-0.3 3,-0.8 0.813 103.0 63.1 -61.8 -29.4 -4.2 9.7 0.9 63 63 A A H 3X S+ 0 0 17 -4,-1.1 4,-2.6 -5,-0.3 6,-0.3 0.805 95.6 59.4 -63.5 -29.6 -2.1 12.3 2.8 64 64 A L H << S+ 0 0 40 -3,-1.0 -1,-0.2 -4,-0.9 -2,-0.2 0.743 105.3 49.9 -67.6 -25.6 0.4 12.0 -0.0 65 65 A A H << S+ 0 0 25 -3,-0.8 -2,-0.2 -4,-0.6 -1,-0.2 0.859 113.1 43.8 -79.7 -39.7 -2.4 13.0 -2.4 66 66 A L H < S- 0 0 113 -4,-1.7 -2,-0.2 1,-0.1 -3,-0.1 0.924 78.0-175.1 -70.8 -47.8 -3.4 16.1 -0.4 67 67 A E < + 0 0 143 -4,-2.6 -3,-0.1 -5,-0.1 -1,-0.1 0.451 51.2 109.8 67.7 0.6 0.2 17.2 0.2 68 68 A H + 0 0 157 -5,-0.2 2,-0.5 2,-0.1 -1,-0.1 0.796 53.3 88.2 -78.3 -28.7 -1.1 20.1 2.5 69 69 A H - 0 0 107 -6,-0.3 2,-0.5 2,-0.0 -2,-0.1 -0.590 67.4-154.9 -73.8 120.9 0.2 18.5 5.7 70 70 A H - 0 0 160 -2,-0.5 -2,-0.1 1,-0.1 3,-0.0 -0.869 10.8-155.0-100.2 126.4 3.9 19.5 6.4 71 71 A H S S+ 0 0 193 -2,-0.5 2,-0.4 1,-0.1 -1,-0.1 0.592 84.1 44.9 -74.8 -10.7 6.0 17.1 8.5 72 72 A H 0 0 139 1,-0.1 -1,-0.1 -3,-0.0 0, 0.0 -0.993 360.0 360.0-138.4 130.6 8.2 20.1 9.6 73 73 A H 0 0 236 -2,-0.4 -1,-0.1 -3,-0.0 -2,-0.1 0.954 360.0 360.0 -86.3 360.0 7.1 23.6 10.8