==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-SEP-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN 14-APR-13 4K59 . COMPND 2 MOLECULE: RNA BINDING PROTEIN RSMF; . SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; . AUTHOR L.BETTS,W.G.WALTON,M.R.REDINBO . 66 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4968.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 42 63.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 23 34.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 12.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 7.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 7 10.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 3 A A 0 0 43 0, 0.0 36,-0.1 0, 0.0 35,-0.1 0.000 360.0 360.0 360.0 -88.9 -5.7 -13.2 -7.5 2 4 A M + 0 0 95 53,-0.4 2,-0.0 1,-0.1 0, 0.0 0.681 360.0 70.6-126.8 -62.3 -6.1 -12.4 -11.2 3 5 A G E -A 55 0A 29 52,-1.7 52,-1.0 56,-0.0 2,-0.4 -0.268 62.0-159.4 -67.6 154.3 -6.1 -8.6 -11.9 4 6 A F E +A 54 0A 144 50,-0.2 2,-0.3 -3,-0.1 50,-0.2 -0.995 17.7 161.6-144.0 133.6 -2.8 -6.6 -11.6 5 7 A L E -A 53 0A 67 48,-1.5 48,-2.8 -2,-0.4 2,-0.4 -0.980 14.2-168.6-150.1 136.4 -2.0 -3.0 -11.1 6 8 A I E +A 52 0A 76 -2,-0.3 2,-0.4 46,-0.2 46,-0.2 -0.998 18.2 175.4-123.4 128.4 1.1 -1.1 -9.9 7 9 A L E -A 51 0A 15 44,-2.1 44,-3.2 -2,-0.4 2,-0.3 -0.983 30.2-119.8-136.4 146.6 0.8 2.6 -9.1 8 10 A S E -A 50 0A 51 -2,-0.4 2,-0.4 42,-0.2 42,-0.3 -0.616 32.8-176.9 -81.9 136.9 3.1 5.3 -7.8 9 11 A R E -A 49 0A 22 40,-3.6 40,-3.1 -2,-0.3 2,-0.2 -0.999 8.8-164.3-137.5 136.8 1.9 6.9 -4.5 10 12 A R > - 0 0 137 -2,-0.4 3,-2.2 38,-0.2 38,-0.1 -0.500 51.0 -52.4-103.7 179.7 3.5 9.8 -2.5 11 13 A E T 3 S+ 0 0 193 36,-0.4 -1,-0.2 1,-0.3 3,-0.1 -0.263 128.1 13.0 -53.2 131.4 2.7 10.9 1.0 12 14 A G T 3 S+ 0 0 93 1,-0.3 2,-0.3 -3,-0.1 -1,-0.3 0.392 98.8 121.4 82.5 -5.6 -1.0 11.4 1.6 13 15 A E < + 0 0 59 -3,-2.2 -1,-0.3 50,-0.0 2,-0.2 -0.747 39.9 173.1 -93.5 144.0 -1.9 9.7 -1.6 14 16 A G - 0 0 18 -2,-0.3 50,-2.0 -3,-0.1 2,-0.3 -0.800 28.2-131.6-147.0 174.8 -4.2 6.7 -1.4 15 17 A I E -C 63 0B 47 -2,-0.2 2,-0.4 48,-0.2 48,-0.2 -0.982 13.1-149.2-136.5 144.7 -6.3 4.0 -3.1 16 18 A T E -C 62 0B 75 46,-2.9 46,-2.3 -2,-0.3 2,-0.4 -0.967 8.5-157.7-119.4 131.8 -9.8 2.8 -2.4 17 19 A L E +C 61 0B 69 -2,-0.4 2,-0.3 44,-0.2 44,-0.2 -0.910 22.8 158.3-108.1 134.5 -10.9 -0.8 -3.0 18 20 A S E -C 60 0B 52 42,-2.3 42,-3.1 -2,-0.4 2,-0.3 -0.866 39.5 -94.1-143.4 178.9 -14.6 -1.7 -3.6 19 21 A L E -C 59 0B 104 -2,-0.3 40,-0.2 40,-0.2 2,-0.2 -0.787 38.9-113.5-101.0 141.8 -16.9 -4.3 -5.1 20 22 A K - 0 0 60 38,-2.6 3,-0.2 -2,-0.3 38,-0.0 -0.513 14.4-140.2 -73.9 140.2 -18.2 -4.2 -8.7 21 23 A A S S+ 0 0 99 -2,-0.2 -1,-0.1 1,-0.2 37,-0.0 0.858 97.5 56.7 -64.8 -35.5 -22.0 -3.7 -9.0 22 24 A D S S+ 0 0 151 36,-0.0 -1,-0.2 -3,-0.0 36,-0.1 0.787 89.3 81.0 -75.7 -32.0 -22.2 -6.1 -11.9 23 25 A Y S S- 0 0 78 -3,-0.2 -4,-0.0 35,-0.1 0, 0.0 -0.438 85.1-109.6 -75.7 151.7 -20.7 -9.2 -10.3 24 26 A P - 0 0 82 0, 0.0 4,-0.3 0, 0.0 -1,-0.1 0.080 24.0-114.3 -70.6-171.3 -22.9 -11.4 -8.1 25 27 A A S >> S+ 0 0 74 2,-0.1 4,-1.6 3,-0.1 3,-0.8 0.943 100.5 44.7 -92.8 -62.2 -22.5 -11.7 -4.3 26 28 A E H 3> S+ 0 0 53 1,-0.2 4,-1.5 2,-0.2 5,-0.1 0.703 108.9 56.8 -63.8 -25.2 -21.4 -15.2 -3.2 27 29 A E H 3> S+ 0 0 110 2,-0.2 4,-2.1 1,-0.2 -1,-0.2 0.800 105.7 49.4 -80.1 -29.3 -18.7 -15.6 -5.9 28 30 A L H <> S+ 0 0 8 -3,-0.8 4,-3.1 -4,-0.3 5,-0.2 0.903 109.3 53.8 -71.1 -43.2 -16.8 -12.5 -4.8 29 31 A I H X S+ 0 0 87 -4,-1.6 4,-1.2 1,-0.2 -2,-0.2 0.914 111.0 45.8 -52.1 -47.2 -16.9 -13.8 -1.2 30 32 A R H X S+ 0 0 144 -4,-1.5 4,-3.4 2,-0.2 -1,-0.2 0.900 111.4 50.9 -69.5 -42.6 -15.4 -17.1 -2.3 31 33 A Q H X S+ 0 0 29 -4,-2.1 4,-0.7 2,-0.2 -2,-0.2 0.986 110.6 49.3 -52.7 -56.7 -12.7 -15.4 -4.5 32 34 A L H < S+ 0 0 66 -4,-3.1 -1,-0.2 1,-0.3 -2,-0.2 0.726 114.5 46.9 -60.6 -23.4 -11.8 -13.2 -1.5 33 35 A R H < S+ 0 0 204 -4,-1.2 -1,-0.3 -5,-0.2 -2,-0.2 0.841 123.9 31.7 -81.0 -38.1 -11.7 -16.4 0.6 34 36 A E H < S+ 0 0 157 -4,-3.4 2,-0.6 1,-0.3 -3,-0.2 0.942 132.6 26.3 -80.9 -80.2 -9.7 -18.4 -2.0 35 37 A G S < S- 0 0 28 -4,-0.7 -1,-0.3 -5,-0.1 -33,-0.1 -0.745 84.8-159.7 -76.6 121.4 -7.5 -15.7 -3.6 36 38 A G - 0 0 38 -2,-0.6 2,-0.5 -3,-0.2 -3,-0.1 0.162 31.0 -86.1 -78.0-159.2 -7.1 -12.9 -1.0 37 39 A I - 0 0 69 -5,-0.1 2,-0.5 18,-0.1 18,-0.2 -0.990 43.1-154.6-110.9 128.4 -6.1 -9.3 -1.9 38 40 A R E -B 54 0A 124 16,-2.6 16,-2.6 -2,-0.5 2,-0.4 -0.897 9.9-171.5-106.8 124.2 -2.4 -8.9 -2.1 39 41 A I E +B 53 0A 105 -2,-0.5 2,-0.4 14,-0.2 14,-0.2 -0.968 11.4 179.5-115.9 134.7 -0.7 -5.5 -1.5 40 42 A L E -B 52 0A 89 12,-2.5 12,-3.3 -2,-0.4 2,-0.8 -0.990 30.7-144.0-138.8 134.3 3.0 -5.1 -2.2 41 43 A V E +B 51 0A 88 -2,-0.4 10,-0.2 10,-0.2 3,-0.1 -0.887 27.5 174.8 -94.1 106.4 5.5 -2.4 -2.0 42 44 A T E - 0 0 53 8,-1.6 2,-0.3 -2,-0.8 -1,-0.2 0.911 60.1 -2.2 -80.7 -47.4 7.7 -3.2 -5.0 43 45 A D E -B 50 0A 89 7,-0.8 7,-2.3 2,-0.0 2,-0.5 -0.982 52.9-148.7-143.0 150.4 10.1 -0.2 -5.1 44 46 A I E +B 49 0A 133 -2,-0.3 2,-0.5 5,-0.2 5,-0.2 -0.981 21.3 177.2-118.5 115.0 10.7 2.9 -3.1 45 47 A I E > -B 48 0A 84 3,-2.5 3,-2.5 -2,-0.5 2,-0.1 -0.928 53.9 -67.8-120.9 107.5 12.1 5.7 -5.3 46 48 A G T 3 S- 0 0 71 -2,-0.5 -1,-0.0 1,-0.3 0, 0.0 -0.314 117.2 -9.2 56.8-123.6 12.6 9.0 -3.6 47 49 A N T 3 S+ 0 0 125 -2,-0.1 2,-0.5 -3,-0.1 -36,-0.4 0.367 123.8 87.7 -84.2 1.6 9.3 10.7 -2.6 48 50 A Q E < - B 0 45A 52 -3,-2.5 -3,-2.5 -38,-0.1 2,-0.5 -0.900 56.4-167.2-111.6 127.1 7.5 8.0 -4.7 49 51 A A E -AB 9 44A 31 -40,-3.1 -40,-3.6 -2,-0.5 2,-0.6 -0.956 15.1-144.5-108.3 132.9 6.3 4.6 -3.4 50 52 A R E -AB 8 43A 95 -7,-2.3 -8,-1.6 -2,-0.5 -7,-0.8 -0.874 17.8-164.1-100.9 119.5 5.2 2.1 -6.0 51 53 A V E -AB 7 41A 22 -44,-3.2 -44,-2.1 -2,-0.6 2,-0.4 -0.901 5.6-156.3-113.4 117.9 2.4 -0.1 -4.8 52 54 A G E -AB 6 40A 5 -12,-3.3 -12,-2.5 -2,-0.5 2,-0.4 -0.742 7.7-168.9 -88.1 142.2 1.3 -3.3 -6.4 53 55 A I E -AB 5 39A 4 -48,-2.8 -48,-1.5 -2,-0.4 2,-0.5 -0.989 5.0-173.2-133.0 123.0 -2.3 -4.6 -5.9 54 56 A E E +AB 4 38A 74 -16,-2.6 -16,-2.6 -2,-0.4 -50,-0.2 -0.968 24.6 149.0-115.7 114.5 -3.3 -8.1 -6.9 55 57 A A E -A 3 0A 2 -52,-1.0 -52,-1.7 -2,-0.5 -53,-0.4 -0.990 48.6 -89.1-145.9 155.1 -7.1 -8.8 -6.6 56 58 A P > - 0 0 2 0, 0.0 3,-1.9 0, 0.0 -28,-0.0 -0.143 47.2-104.9 -58.0 159.2 -9.9 -10.8 -8.2 57 59 A R T 3 S+ 0 0 159 1,-0.3 -34,-0.1 3,-0.0 -29,-0.0 0.728 115.9 68.2 -60.7 -25.1 -11.8 -9.2 -11.1 58 60 A G T 3 S+ 0 0 0 -31,-0.1 -38,-2.6 -39,-0.1 2,-0.5 0.557 84.7 87.2 -73.5 -6.8 -14.8 -8.4 -9.0 59 61 A V E < -C 19 0B 14 -3,-1.9 2,-0.5 -40,-0.2 -40,-0.2 -0.821 69.6-146.9 -99.4 129.9 -12.8 -5.9 -7.0 60 62 A L E -C 18 0B 77 -42,-3.1 -42,-2.3 -2,-0.5 2,-0.5 -0.850 8.2-158.3 -96.8 126.2 -12.6 -2.3 -8.3 61 63 A I E +C 17 0B 43 -2,-0.5 2,-0.4 -44,-0.2 -44,-0.2 -0.935 16.5 179.2-108.9 122.8 -9.3 -0.5 -7.6 62 64 A V E -C 16 0B 44 -46,-2.3 -46,-2.9 -2,-0.5 2,-0.2 -0.980 27.4-130.7-134.4 122.8 -9.6 3.3 -7.7 63 65 A R E > -C 15 0B 127 -2,-0.4 3,-1.8 -48,-0.2 -48,-0.2 -0.528 27.2-124.5 -70.5 140.6 -7.1 6.1 -7.1 64 66 A D T 3 S+ 0 0 81 -50,-2.0 -1,-0.1 1,-0.3 -49,-0.1 0.657 99.9 82.7 -65.3 -17.0 -8.4 8.6 -4.6 65 67 A E T 3 0 0 99 -51,-0.3 -1,-0.3 1,-0.1 -50,-0.1 0.765 360.0 360.0 -55.1 -25.5 -7.8 11.5 -7.1 66 68 A L < 0 0 150 -3,-1.8 -1,-0.1 0, 0.0 -4,-0.0 -0.850 360.0 360.0-107.2 360.0 -11.2 10.5 -8.7