==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER APOPTOSIS 07-JUL-08 2K6B . COMPND 2 MOLECULE: PROGRAMMED CELL DEATH PROTEIN 5; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR Y.FENG,H.YAO,D.LIU,J.WANG . 113 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 9259.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 83 73.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 1.8 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 6.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 5.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 67 59.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 0 A G 0 0 116 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 155.6 32.3 -11.9 -3.1 2 1 A S > + 0 0 91 1,-0.1 4,-2.9 3,-0.1 5,-0.2 0.614 360.0 130.1 59.7 20.9 30.5 -8.6 -2.4 3 2 A A H > S+ 0 0 64 2,-0.2 4,-1.8 1,-0.2 5,-0.1 0.903 71.0 46.7 -72.4 -38.8 33.9 -6.9 -2.4 4 3 A D H > S+ 0 0 134 2,-0.2 4,-2.4 1,-0.2 -1,-0.2 0.864 114.0 50.2 -69.8 -35.0 32.8 -4.1 -4.8 5 4 A E H > S+ 0 0 102 2,-0.2 4,-2.0 1,-0.2 -2,-0.2 0.942 112.6 44.1 -69.0 -49.4 29.7 -3.7 -2.6 6 5 A E H X S+ 0 0 131 -4,-2.9 4,-0.9 2,-0.2 -2,-0.2 0.779 113.5 53.0 -67.9 -28.0 31.7 -3.4 0.6 7 6 A L H >X S+ 0 0 120 -4,-1.8 4,-0.8 -5,-0.2 3,-0.8 0.942 111.3 44.4 -68.3 -48.1 34.1 -1.2 -1.1 8 7 A E H 3X S+ 0 0 71 -4,-2.4 4,-3.0 1,-0.2 3,-0.3 0.813 103.8 68.3 -65.9 -30.3 31.4 1.1 -2.2 9 8 A A H 3X S+ 0 0 23 -4,-2.0 4,-2.4 1,-0.2 -1,-0.2 0.842 93.3 57.0 -57.5 -36.4 29.9 0.8 1.3 10 9 A L H S+ 0 0 12 3,-0.1 3,-2.9 4,-0.0 2,-0.5 -0.527 81.8 33.7-136.2-161.2 8.3 20.8 8.9 27 26 A D T 3> S+ 0 0 129 1,-0.3 4,-1.8 2,-0.2 3,-0.5 -0.196 127.1 26.5 48.8 -90.9 7.0 21.9 5.6 28 27 A A H 3> S+ 0 0 52 -2,-0.5 4,-2.5 1,-0.2 -1,-0.3 0.846 122.8 56.2 -67.4 -31.0 8.6 19.4 3.2 29 28 A A H <> S+ 0 0 20 -3,-2.9 4,-2.6 2,-0.2 -1,-0.2 0.799 104.6 52.8 -71.6 -28.2 8.8 16.9 6.1 30 29 A Q H > S+ 0 0 127 -3,-0.5 4,-2.3 2,-0.2 -2,-0.2 0.918 112.7 42.7 -73.4 -43.9 5.1 17.2 6.6 31 30 A Q H X S+ 0 0 131 -4,-1.8 4,-2.5 2,-0.2 -2,-0.2 0.881 114.1 53.5 -67.8 -38.5 4.4 16.4 3.0 32 31 A E H X S+ 0 0 113 -4,-2.5 4,-2.7 2,-0.2 -2,-0.2 0.948 108.6 48.7 -58.7 -50.8 7.0 13.7 3.1 33 32 A A H X S+ 0 0 51 -4,-2.6 4,-1.6 1,-0.2 -2,-0.2 0.914 113.3 46.6 -56.5 -46.2 5.3 12.1 6.1 34 33 A K H X S+ 0 0 116 -4,-2.3 4,-1.8 1,-0.2 -1,-0.2 0.859 110.8 53.2 -66.0 -37.7 2.0 12.2 4.4 35 34 A H H X S+ 0 0 108 -4,-2.5 4,-3.2 1,-0.2 -2,-0.2 0.904 106.9 51.8 -63.5 -40.8 3.6 10.8 1.3 36 35 A R H X S+ 0 0 181 -4,-2.7 4,-2.2 1,-0.2 -2,-0.2 0.844 105.5 56.9 -66.4 -31.0 5.0 7.9 3.3 37 36 A E H X S+ 0 0 72 -4,-1.6 4,-1.1 2,-0.2 -1,-0.2 0.930 115.1 36.5 -62.5 -46.0 1.5 7.3 4.7 38 37 A A H X S+ 0 0 53 -4,-1.8 4,-3.7 2,-0.2 5,-0.2 0.905 112.1 61.0 -72.2 -40.8 0.2 6.9 1.2 39 38 A E H X S+ 0 0 81 -4,-3.2 4,-3.1 1,-0.2 5,-0.2 0.878 103.6 48.9 -56.3 -45.3 3.4 5.2 -0.0 40 39 A M H X S+ 0 0 97 -4,-2.2 4,-1.4 2,-0.2 -1,-0.2 0.892 117.9 40.6 -65.3 -37.9 3.0 2.3 2.4 41 40 A R H X S+ 0 0 72 -4,-1.1 4,-2.0 -5,-0.2 -2,-0.2 0.912 117.4 48.7 -74.7 -42.4 -0.6 1.7 1.4 42 41 A N H X S+ 0 0 99 -4,-3.7 4,-2.7 2,-0.2 -2,-0.2 0.905 109.0 52.6 -64.8 -44.4 0.1 2.3 -2.3 43 42 A S H X S+ 0 0 43 -4,-3.1 4,-1.4 -5,-0.2 5,-0.2 0.930 111.0 45.1 -61.9 -47.1 3.0 -0.0 -2.4 44 43 A I H X S+ 0 0 34 -4,-1.4 4,-2.3 -5,-0.2 3,-0.3 0.933 116.0 47.5 -64.7 -40.1 1.2 -3.0 -0.9 45 44 A L H X S+ 0 0 19 -4,-2.0 4,-2.6 1,-0.2 -2,-0.2 0.882 111.2 50.8 -67.1 -36.7 -1.8 -2.3 -3.2 46 45 A A H < S+ 0 0 31 -4,-2.7 -1,-0.2 1,-0.2 -2,-0.2 0.722 116.3 41.3 -74.3 -21.9 0.4 -2.0 -6.2 47 46 A Q H < S+ 0 0 140 -4,-1.4 -2,-0.2 -3,-0.3 -1,-0.2 0.750 121.6 40.2 -94.0 -30.0 2.1 -5.3 -5.5 48 47 A V H < S+ 0 0 10 -4,-2.3 40,-3.5 -5,-0.2 2,-0.5 0.892 115.9 50.3 -85.3 -46.0 -1.0 -7.2 -4.4 49 48 A L B < S-a 88 0A 2 -4,-2.6 40,-0.1 -5,-0.3 -1,-0.1 -0.791 86.0-141.1 -92.4 129.1 -3.3 -5.8 -7.0 50 49 A D > - 0 0 48 38,-1.4 4,-2.3 -2,-0.5 3,-0.3 -0.272 35.5 -85.8 -80.5-178.1 -1.9 -6.1 -10.4 51 50 A Q H > S+ 0 0 144 1,-0.2 4,-2.5 2,-0.2 5,-0.2 0.860 128.5 53.1 -56.3 -39.2 -2.3 -3.4 -13.1 52 51 A S H > S+ 0 0 41 1,-0.2 4,-2.1 2,-0.2 -1,-0.2 0.898 108.5 48.8 -65.4 -42.7 -5.6 -4.8 -14.2 53 52 A A H > S+ 0 0 0 35,-0.3 4,-2.5 -3,-0.3 -1,-0.2 0.880 110.4 51.3 -68.7 -38.3 -7.0 -4.7 -10.7 54 53 A R H X S+ 0 0 77 -4,-2.3 4,-2.6 2,-0.2 -2,-0.2 0.928 109.5 50.3 -63.6 -43.0 -5.8 -1.1 -10.2 55 54 A A H X S+ 0 0 51 -4,-2.5 4,-2.0 1,-0.2 -2,-0.2 0.893 113.2 45.7 -61.3 -39.3 -7.5 -0.1 -13.4 56 55 A R H X S+ 0 0 97 -4,-2.1 4,-1.9 2,-0.2 -1,-0.2 0.886 111.4 52.5 -70.8 -37.6 -10.7 -1.8 -12.3 57 56 A L H X S+ 0 0 16 -4,-2.5 4,-2.4 2,-0.2 -2,-0.2 0.884 107.4 52.9 -63.7 -40.4 -10.3 -0.2 -8.9 58 57 A S H X S+ 0 0 79 -4,-2.6 4,-1.4 2,-0.2 -2,-0.2 0.935 110.9 45.3 -60.8 -47.5 -10.0 3.2 -10.5 59 58 A N H X S+ 0 0 77 -4,-2.0 4,-1.9 1,-0.2 -1,-0.2 0.830 111.1 54.9 -66.8 -29.3 -13.2 2.7 -12.5 60 59 A L H X S+ 0 0 31 -4,-1.9 4,-2.8 2,-0.2 -2,-0.2 0.908 106.6 50.0 -69.9 -39.9 -14.8 1.5 -9.3 61 60 A A H < S+ 0 0 38 -4,-2.4 -1,-0.2 1,-0.2 -2,-0.2 0.788 108.2 55.7 -66.1 -28.8 -13.8 4.7 -7.6 62 61 A L H < S+ 0 0 133 -4,-1.4 -2,-0.2 2,-0.2 -1,-0.2 0.902 114.2 37.2 -69.9 -43.6 -15.3 6.5 -10.5 63 62 A V H < S- 0 0 93 -4,-1.9 -2,-0.2 1,-0.2 -3,-0.2 0.964 142.1 -11.5 -77.1 -51.9 -18.7 4.8 -10.0 64 63 A K >X - 0 0 91 -4,-2.8 3,-1.1 -5,-0.1 4,-1.0 -0.690 53.8-171.8-155.4 94.3 -18.9 4.7 -6.2 65 64 A P H 3> S+ 0 0 62 0, 0.0 4,-2.6 0, 0.0 5,-0.2 0.664 78.6 79.4 -62.1 -17.2 -15.8 5.5 -4.1 66 65 A E H 3> S+ 0 0 100 1,-0.2 4,-1.0 2,-0.2 -5,-0.1 0.936 100.9 36.7 -54.3 -49.4 -17.7 4.3 -0.9 67 66 A K H <> S+ 0 0 35 -3,-1.1 4,-2.8 2,-0.2 -1,-0.2 0.793 109.6 62.8 -78.6 -28.8 -17.1 0.7 -1.8 68 67 A T H X S+ 0 0 3 -4,-1.0 4,-3.4 1,-0.2 5,-0.3 0.945 101.9 53.1 -56.2 -46.4 -13.6 1.5 -3.1 69 68 A K H X S+ 0 0 144 -4,-2.6 4,-1.9 1,-0.2 -1,-0.2 0.847 110.4 47.4 -57.1 -39.6 -12.7 2.7 0.4 70 69 A A H X S+ 0 0 16 -4,-1.0 4,-2.5 2,-0.2 -1,-0.2 0.934 115.8 42.3 -70.9 -45.6 -13.9 -0.6 1.8 71 70 A V H X S+ 0 0 2 -4,-2.8 4,-2.9 2,-0.2 -2,-0.2 0.875 112.6 53.3 -72.2 -35.3 -12.1 -2.8 -0.7 72 71 A E H X S+ 0 0 74 -4,-3.4 4,-1.9 2,-0.2 -1,-0.2 0.954 113.8 44.3 -59.5 -47.5 -8.9 -0.6 -0.5 73 72 A N H X S+ 0 0 19 -4,-1.9 4,-1.8 -5,-0.3 -2,-0.2 0.899 112.4 52.6 -60.7 -43.9 -9.0 -1.1 3.3 74 73 A Y H X S+ 0 0 57 -4,-2.5 4,-2.7 1,-0.2 -2,-0.2 0.908 108.0 49.6 -61.9 -45.4 -9.8 -4.8 2.8 75 74 A L H X S+ 0 0 1 -4,-2.9 4,-3.0 1,-0.2 -1,-0.2 0.871 106.3 56.6 -62.7 -37.4 -6.8 -5.4 0.5 76 75 A I H X S+ 0 0 17 -4,-1.9 4,-1.6 2,-0.2 -1,-0.2 0.907 110.2 46.1 -58.1 -40.3 -4.6 -3.6 3.0 77 76 A Q H X S+ 0 0 30 -4,-1.8 4,-0.8 2,-0.2 3,-0.2 0.957 113.4 47.4 -66.0 -50.0 -5.8 -6.2 5.6 78 77 A M H ><>S+ 0 0 38 -4,-2.7 5,-1.0 1,-0.3 3,-0.7 0.869 111.8 51.0 -61.3 -38.1 -5.3 -9.1 3.2 79 78 A A H ><5S+ 0 0 19 -4,-3.0 3,-1.2 1,-0.2 -1,-0.3 0.834 102.8 60.1 -67.3 -32.0 -1.8 -7.7 2.3 80 79 A R H 3<5S+ 0 0 179 -4,-1.6 -1,-0.2 1,-0.3 -2,-0.2 0.690 96.7 61.2 -71.0 -19.0 -1.0 -7.5 6.1 81 80 A Y T <<5S- 0 0 176 -4,-0.8 -1,-0.3 -3,-0.7 -2,-0.2 0.669 103.0-136.5 -77.7 -17.8 -1.6 -11.3 6.2 82 81 A G T < 5 + 0 0 61 -3,-1.2 -3,-0.2 -4,-0.4 -2,-0.1 0.754 64.0 131.2 68.8 25.6 1.3 -11.7 3.7 83 82 A Q < + 0 0 106 -5,-1.0 2,-1.4 1,-0.1 3,-0.4 0.375 32.2 106.9 -92.4 4.4 -0.8 -14.2 1.8 84 83 A L + 0 0 43 1,-0.2 -1,-0.1 -5,-0.2 3,-0.1 -0.680 19.8 140.1 -94.7 91.0 -0.2 -12.6 -1.6 85 84 A S S S+ 0 0 110 -2,-1.4 2,-0.2 2,-0.1 -1,-0.2 0.814 76.2 38.8 -86.4 -42.7 2.1 -14.7 -3.4 86 85 A E S S- 0 0 157 -3,-0.4 2,-0.2 1,-0.1 -1,-0.0 -0.604 99.0 -94.0-102.8 165.0 0.1 -14.1 -6.5 87 86 A K - 0 0 109 -2,-0.2 2,-0.7 -3,-0.1 -38,-0.2 -0.482 35.3-114.6 -76.2 143.8 -1.5 -11.0 -7.8 88 87 A V B -a 49 0A 13 -40,-3.5 -38,-1.4 -2,-0.2 -35,-0.3 -0.757 40.3-148.0 -79.1 116.6 -5.1 -10.4 -7.0 89 88 A S > - 0 0 49 -2,-0.7 4,-2.7 -40,-0.1 5,-0.2 -0.229 26.0 -97.7 -80.6 174.1 -6.7 -10.5 -10.3 90 89 A E H > S+ 0 0 68 1,-0.2 4,-2.6 2,-0.2 5,-0.2 0.933 126.0 51.1 -59.4 -46.1 -9.7 -8.5 -11.5 91 90 A Q H > S+ 0 0 144 1,-0.2 4,-2.2 2,-0.2 -1,-0.2 0.861 110.5 50.4 -60.6 -35.4 -12.0 -11.4 -10.8 92 91 A G H > S+ 0 0 20 2,-0.2 4,-2.4 1,-0.2 -1,-0.2 0.931 110.1 48.0 -68.7 -45.5 -10.6 -11.7 -7.3 93 92 A L H X S+ 0 0 9 -4,-2.7 4,-3.1 1,-0.2 -2,-0.2 0.891 112.4 50.5 -60.6 -39.9 -11.1 -8.0 -6.6 94 93 A I H X S+ 0 0 69 -4,-2.6 4,-2.2 2,-0.2 -2,-0.2 0.881 107.4 53.1 -67.7 -37.4 -14.6 -8.4 -7.9 95 94 A E H X S+ 0 0 107 -4,-2.2 4,-1.4 2,-0.2 -2,-0.2 0.930 113.4 43.9 -62.3 -44.1 -15.2 -11.5 -5.7 96 95 A I H >X S+ 0 0 17 -4,-2.4 4,-1.9 1,-0.2 3,-0.6 0.962 110.7 54.6 -61.6 -51.1 -14.1 -9.4 -2.7 97 96 A L H 3X S+ 0 0 40 -4,-3.1 4,-1.2 1,-0.3 -2,-0.2 0.826 103.5 58.5 -51.9 -39.1 -16.2 -6.4 -3.9 98 97 A K H 3< S+ 0 0 118 -4,-2.2 3,-0.4 1,-0.2 4,-0.3 0.916 109.2 41.5 -58.8 -48.3 -19.2 -8.7 -4.0 99 98 A K H << S+ 0 0 82 -4,-1.4 4,-0.4 -3,-0.6 3,-0.3 0.796 118.2 46.1 -74.9 -23.6 -19.0 -9.5 -0.3 100 99 A V H < S+ 0 0 1 -4,-1.9 -1,-0.2 1,-0.2 -2,-0.2 0.581 82.6 103.0 -93.8 -7.7 -18.2 -6.0 0.7 101 100 A S S < S+ 0 0 75 -4,-1.2 -1,-0.2 -3,-0.4 -2,-0.1 0.794 102.8 11.3 -47.1 -45.1 -21.0 -4.4 -1.5 102 101 A Q S S- 0 0 160 -4,-0.3 2,-0.2 -3,-0.3 -2,-0.1 0.825 136.5 -56.8 -92.8 -71.8 -23.2 -3.8 1.5 103 102 A Q S S+ 0 0 133 -4,-0.4 -3,-0.2 -33,-0.0 -2,-0.1 -0.608 71.9 138.3-177.2 104.7 -20.9 -4.5 4.4 104 103 A T + 0 0 88 -2,-0.2 -3,-0.1 -4,-0.1 3,-0.1 -0.581 56.5 74.0-151.9 79.6 -18.9 -7.6 5.0 105 104 A E + 0 0 44 -2,-0.1 2,-1.6 -5,-0.1 -5,-0.1 0.225 57.1 110.3-160.8 -10.0 -15.5 -6.8 6.2 106 105 A K + 0 0 152 2,-0.1 2,-0.2 4,-0.0 4,-0.1 -0.616 49.2 178.8 -80.7 88.9 -16.0 -5.7 9.7 107 106 A T - 0 0 78 -2,-1.6 2,-2.2 2,-0.2 4,-0.2 -0.602 44.3 -97.1 -88.8 157.2 -14.5 -8.6 11.5 108 107 A T S S+ 0 0 133 -2,-0.2 2,-0.3 2,-0.1 -2,-0.1 -0.557 96.1 86.2 -79.3 76.4 -14.3 -8.7 15.3 109 108 A T S S- 0 0 96 -2,-2.2 2,-1.3 2,-0.0 -2,-0.2 -0.883 88.8-103.9-164.9 146.0 -10.7 -7.4 15.4 110 109 A V - 0 0 133 -2,-0.3 2,-0.3 -4,-0.1 -2,-0.1 -0.712 46.2-172.5 -82.9 96.4 -9.4 -3.9 15.5 111 110 A K - 0 0 51 -2,-1.3 2,-0.1 -4,-0.2 -2,-0.0 -0.718 16.7-124.6 -92.9 144.2 -8.1 -3.5 12.0 112 111 A F 0 0 173 -2,-0.3 -35,-0.1 -39,-0.1 -1,-0.1 -0.308 360.0 360.0 -83.0 168.3 -6.2 -0.5 10.9 113 112 A N 0 0 128 -2,-0.1 -40,-0.1 -37,-0.1 -1,-0.0 -0.986 360.0 360.0-124.2 360.0 -6.9 1.9 8.1