==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN TRANSPORT 18-JUL-08 2K6S . COMPND 2 MOLECULE: RAB11FIP2 PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR J.WEI,Y.LIU,J.D.BALEJA . 82 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8406.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 74 90.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 3.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 14 17.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 56 68.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 104 0, 0.0 3,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-115.5 131.3 -18.2 -18.7 2 2 A S > + 0 0 89 1,-0.1 2,-3.0 4,-0.1 5,-0.5 0.752 360.0 87.2 -95.0 -29.2 130.7 -15.8 -15.8 3 3 A L T 5S+ 0 0 141 4,-0.1 2,-0.2 3,-0.1 -1,-0.1 -0.399 83.1 76.6 -71.4 69.8 134.3 -15.2 -14.9 4 4 A T T >>5S- 0 0 57 -2,-3.0 3,-2.0 -3,-0.0 4,-2.0 -0.690 105.0 -31.9-152.2-157.9 134.5 -12.4 -17.5 5 5 A Y H 3>5S+ 0 0 96 1,-0.3 4,-1.7 2,-0.2 -3,-0.1 0.877 133.6 51.8 -36.8 -58.8 133.5 -8.7 -18.1 6 6 A E H 3>5S+ 0 0 147 1,-0.2 4,-1.1 2,-0.2 -1,-0.3 0.786 112.3 49.1 -52.9 -30.0 130.3 -9.1 -16.0 7 7 A E H <>X S+ 0 0 192 -4,-1.1 4,-2.0 -5,-0.2 3,-0.7 0.968 111.6 44.2 -76.3 -57.8 133.8 3.1 2.2 21 21 A R H 3X S+ 0 0 148 -4,-2.8 4,-2.2 1,-0.2 5,-0.2 0.905 105.8 63.7 -52.2 -47.9 132.7 0.9 5.1 22 22 A K H 3X S+ 0 0 119 -4,-1.6 4,-1.4 -5,-0.3 -1,-0.2 0.866 109.3 39.6 -45.3 -44.9 136.4 0.6 6.3 23 23 A D H X S+ 0 0 56 -4,-2.6 3,-1.3 1,-0.2 4,-0.8 0.898 114.1 53.4 -70.8 -41.6 131.6 5.1 14.0 29 29 A L H 3X S+ 0 0 79 -4,-3.2 4,-1.8 1,-0.3 -1,-0.2 0.766 97.1 68.1 -64.5 -25.5 133.8 3.4 16.5 30 30 A E H 3X S+ 0 0 101 -4,-0.5 4,-1.2 -5,-0.3 -1,-0.3 0.770 94.3 57.9 -65.5 -25.0 135.3 6.8 17.3 31 31 A D H <> S+ 0 0 104 -3,-1.3 4,-0.6 -4,-0.4 -1,-0.2 0.910 106.6 46.1 -70.8 -43.1 131.9 7.8 18.8 32 32 A Y H >< S+ 0 0 156 -4,-0.8 3,-0.7 1,-0.2 4,-0.3 0.853 110.9 53.8 -67.1 -35.6 132.0 4.9 21.3 33 33 A I H >X S+ 0 0 72 -4,-1.8 3,-1.3 1,-0.2 4,-0.5 0.803 95.0 69.3 -68.6 -30.8 135.6 5.7 22.2 34 34 A D H >< S+ 0 0 47 -4,-1.2 3,-0.8 1,-0.2 -1,-0.2 0.807 75.0 85.8 -57.8 -32.2 134.7 9.4 23.0 35 35 A N G X< S+ 0 0 79 -3,-0.7 3,-1.0 -4,-0.6 -1,-0.2 0.827 88.2 52.5 -37.1 -44.4 132.8 8.2 26.1 36 36 A L G <4 S+ 0 0 153 -3,-1.3 -1,-0.3 1,-0.3 2,-0.2 0.944 126.7 22.5 -59.7 -49.3 136.1 8.4 28.0 37 37 A L G << S+ 0 0 130 -3,-0.8 -1,-0.3 -4,-0.5 2,-0.3 -0.525 120.4 64.4-117.7 61.2 136.6 12.0 26.8 38 38 A V S < S- 0 0 70 -3,-1.0 2,-0.0 -2,-0.2 -7,-0.0 -0.969 96.6 -57.9-170.5 162.7 133.0 13.0 26.0 39 39 A R - 0 0 234 -2,-0.3 2,-0.3 1,-0.1 -2,-0.1 -0.276 55.8-158.5 -53.3 123.9 129.6 13.7 27.6 40 40 A V 0 0 98 1,-0.1 -1,-0.1 -4,-0.1 -4,-0.0 -0.801 360.0 360.0-109.2 150.7 128.4 10.5 29.3 41 41 A M 0 0 237 -2,-0.3 -1,-0.1 0, 0.0 -2,-0.0 0.571 360.0 360.0-128.4 360.0 124.9 9.4 30.2 42 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 43 1 B G 0 0 121 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -82.4 136.5 4.1 -27.8 44 2 B S + 0 0 75 2,-0.1 2,-2.6 4,-0.0 5,-0.4 0.213 360.0 122.7-119.2 12.8 138.0 1.7 -25.2 45 3 B L + 0 0 145 4,-0.1 2,-0.2 3,-0.1 -1,-0.0 -0.451 62.2 78.4 -75.9 71.1 135.6 2.5 -22.3 46 4 B T S >> S- 0 0 75 -2,-2.6 4,-2.1 -41,-0.0 3,-1.8 -0.684 103.2 -33.3-151.3-158.0 134.6 -1.1 -22.0 47 5 B Y H 3> S+ 0 0 93 1,-0.3 4,-1.7 2,-0.2 -3,-0.0 0.882 133.0 51.5 -37.9 -59.1 135.8 -4.5 -20.7 48 6 B E H 3> S+ 0 0 143 1,-0.2 4,-1.1 2,-0.2 -1,-0.3 0.786 112.5 49.2 -53.0 -29.8 139.5 -3.7 -21.4 49 7 B E H <> S+ 0 0 73 -3,-1.8 4,-1.4 -5,-0.4 -2,-0.2 0.952 104.7 53.5 -76.1 -53.8 138.9 -0.4 -19.4 50 8 B V H X S+ 0 0 8 -4,-2.1 4,-1.6 1,-0.2 -2,-0.2 0.806 105.1 59.9 -52.4 -30.4 137.2 -1.8 -16.3 51 9 B L H X S+ 0 0 80 -4,-1.7 4,-1.4 -5,-0.3 3,-0.5 0.977 98.9 53.8 -61.4 -57.7 140.2 -4.2 -16.0 52 10 B Q H X S+ 0 0 136 -4,-1.1 4,-2.0 1,-0.3 -1,-0.2 0.832 106.1 55.5 -45.4 -39.8 142.8 -1.4 -15.7 53 11 B E H X S+ 0 0 55 -4,-1.4 4,-2.8 2,-0.2 5,-0.4 0.943 99.9 58.6 -60.6 -50.0 140.7 0.0 -12.8 54 12 B L H X S+ 0 0 16 -4,-1.6 4,-2.0 -3,-0.5 -1,-0.2 0.890 112.1 40.0 -46.3 -48.8 140.8 -3.3 -10.9 55 13 B V H X S+ 0 0 69 -4,-1.4 4,-2.9 2,-0.2 5,-0.3 0.838 112.2 58.5 -71.8 -32.6 144.7 -3.1 -10.8 56 14 B K H X S+ 0 0 128 -4,-2.0 4,-2.5 -5,-0.3 -2,-0.2 0.981 112.7 37.0 -58.7 -59.3 144.5 0.7 -10.2 57 15 B H H X S+ 0 0 55 -4,-2.8 4,-2.1 2,-0.2 5,-0.2 0.887 115.5 58.0 -59.2 -41.7 142.5 0.3 -7.0 58 16 B K H X S+ 0 0 107 -4,-2.0 4,-1.1 -5,-0.4 3,-0.5 0.966 113.5 35.2 -53.5 -61.5 144.5 -2.8 -6.1 59 17 B E H X S+ 0 0 85 -4,-2.9 4,-2.8 1,-0.2 5,-0.3 0.840 113.8 60.6 -63.8 -34.1 147.9 -1.2 -6.2 60 18 B L H X S+ 0 0 70 -4,-2.5 4,-1.6 -5,-0.3 -1,-0.2 0.847 105.8 47.1 -62.6 -34.0 146.4 2.0 -4.7 61 19 B L H X S+ 0 0 57 -4,-2.1 4,-0.8 -3,-0.5 -1,-0.2 0.745 113.3 50.1 -78.6 -24.0 145.3 0.1 -1.6 62 20 B R H >X S+ 0 0 186 -4,-1.1 4,-2.0 -5,-0.2 3,-0.7 0.967 111.6 44.2 -76.3 -57.8 148.8 -1.5 -1.4 63 21 B R H 3X S+ 0 0 150 -4,-2.8 4,-2.2 1,-0.2 5,-0.2 0.905 105.8 63.7 -52.2 -48.0 150.9 1.7 -1.6 64 22 B K H 3X S+ 0 0 121 -4,-1.6 4,-1.4 -5,-0.3 -1,-0.2 0.866 109.3 39.6 -45.3 -44.7 148.5 3.5 0.8 65 23 B D H X S+ 0 0 57 -4,-2.6 3,-1.2 1,-0.2 4,-0.8 0.897 114.1 53.4 -70.9 -41.4 157.4 3.4 5.5 71 29 B L H 3X S+ 0 0 78 -4,-3.2 4,-1.8 1,-0.3 -1,-0.2 0.766 97.1 68.1 -64.9 -25.0 156.7 6.8 7.2 72 30 B E H 3X S+ 0 0 101 -4,-0.6 4,-1.2 -5,-0.3 -1,-0.3 0.769 94.3 57.9 -65.7 -25.1 156.6 5.0 10.6 73 31 B D H <> S+ 0 0 100 -3,-1.2 4,-0.6 -4,-0.4 -1,-0.2 0.910 106.6 46.1 -70.7 -43.1 160.3 4.4 10.3 74 32 B Y H >< S+ 0 0 158 -4,-0.8 3,-0.7 1,-0.2 4,-0.3 0.853 110.9 53.8 -67.1 -35.6 161.1 8.1 10.0 75 33 B I H >X S+ 0 0 67 -4,-1.8 3,-1.3 1,-0.2 4,-0.5 0.803 95.0 69.3 -68.7 -30.7 158.8 8.8 12.9 76 34 B D H >< S+ 0 0 28 -4,-1.2 3,-0.7 1,-0.2 -1,-0.2 0.805 75.0 85.7 -57.9 -32.1 160.6 6.3 15.1 77 35 B N G X< S+ 0 0 116 -3,-0.7 3,-0.9 -4,-0.6 -1,-0.2 0.828 88.1 52.6 -37.4 -44.3 163.7 8.6 15.2 78 36 B L G <4 S+ 0 0 156 -3,-1.3 2,-0.3 1,-0.3 -1,-0.3 0.944 126.9 22.1 -59.6 -49.4 162.1 10.4 18.1 79 37 B L G << S- 0 0 111 -3,-0.7 -1,-0.3 -4,-0.5 -2,-0.2 -0.552 89.9-157.1-118.0 62.9 161.6 7.0 20.0 80 38 B V < - 0 0 92 -3,-0.9 2,-1.0 -2,-0.3 -3,-0.1 -0.187 36.7 -99.1 -47.8 115.9 164.3 4.9 18.3 81 39 B R S S+ 0 0 176 1,-0.1 -1,-0.2 2,-0.0 -4,-0.0 -0.169 79.0 130.7 -45.7 85.3 163.1 1.3 18.8 82 40 B V 0 0 123 -2,-1.0 -1,-0.1 -3,-0.1 -2,-0.1 -0.468 360.0 360.0-139.2 59.9 165.4 0.5 21.8 83 41 B M 0 0 237 0, 0.0 -2,-0.0 0, 0.0 0, 0.0 -0.990 360.0 360.0-138.7 360.0 163.1 -1.1 24.4