==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=11-MAR-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CELL ADHESION 08-OCT-09 3K6D . COMPND 2 MOLECULE: T-CADHERIN; . SOURCE 2 ORGANISM_SCIENTIFIC: XENOPUS LAEVIS; . AUTHOR L.SHAPIRO,C.CIATTO . 99 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5901.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 55 55.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 7 7.1 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 29 29.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 5.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 6.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 1 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A S 0 0 104 0, 0.0 2,-0.5 0, 0.0 27,-0.2 0.000 360.0 360.0 360.0-179.3 8.5 1.0 8.9 2 2 A I - 0 0 21 75,-0.1 2,-0.6 25,-0.1 24,-0.2 -0.920 360.0-161.7-109.3 130.2 6.4 3.3 11.1 3 3 A V B +A 25 0A 79 22,-3.1 22,-2.4 -2,-0.5 24,-0.0 -0.937 16.0 168.3-106.7 117.1 2.9 2.4 12.4 4 4 A A - 0 0 19 -2,-0.6 90,-0.5 20,-0.2 20,-0.1 -0.588 17.1-163.5-129.1 71.2 0.9 5.5 13.5 5 5 A P - 0 0 78 0, 0.0 2,-0.1 0, 0.0 -2,-0.0 -0.054 30.4 -96.1 -55.9 152.2 -2.8 4.5 14.1 6 6 A S - 0 0 86 87,-0.1 2,-0.4 89,-0.1 89,-0.2 -0.434 37.3-147.4 -78.6 146.2 -5.4 7.2 14.3 7 7 A I E -b 95 0B 15 87,-2.3 89,-2.8 -2,-0.1 2,-0.5 -0.870 7.8-160.3-114.4 139.0 -6.4 8.4 17.8 8 8 A S E -b 96 0B 67 -2,-0.4 89,-0.2 87,-0.2 64,-0.0 -0.993 10.6-174.5-118.6 132.8 -9.8 9.7 18.9 9 9 A I E -b 97 0B 1 87,-2.6 89,-1.7 -2,-0.5 2,-0.1 -0.995 23.0-128.7-123.5 123.6 -9.9 11.7 22.1 10 10 A P E > -b 98 0B 54 0, 0.0 3,-0.5 0, 0.0 55,-0.4 -0.448 30.6-110.8 -67.2 143.5 -13.2 12.8 23.5 11 11 A E T 3 S+ 0 0 31 87,-2.4 55,-0.2 1,-0.2 53,-0.1 -0.285 96.2 32.4 -64.2 158.9 -13.5 16.5 24.3 12 12 A N T 3 S+ 0 0 107 53,-2.3 -1,-0.2 1,-0.1 52,-0.1 0.798 76.0 177.1 67.4 30.5 -13.6 17.7 28.0 13 13 A Q < - 0 0 46 -3,-0.5 2,-0.2 52,-0.2 -1,-0.1 -0.319 24.7-125.5 -60.6 153.6 -11.4 14.9 29.4 14 14 A R - 0 0 187 1,-0.2 -1,-0.1 49,-0.1 49,-0.0 -0.621 40.4 -55.5 -94.5 159.9 -10.8 15.3 33.1 15 15 A I S S+ 0 0 120 -2,-0.2 -1,-0.2 2,-0.1 2,-0.1 -0.136 82.2 86.0 -53.9 161.1 -7.4 15.4 34.9 16 16 A P - 0 0 96 0, 0.0 47,-0.1 0, 0.0 -2,-0.1 0.427 69.3-143.1 -92.9 156.5 -5.0 14.1 35.3 17 17 A F S S+ 0 0 54 -2,-0.1 45,-0.2 45,-0.1 2,-0.1 -0.921 70.7 53.4-118.1 149.8 -2.9 15.3 32.4 18 18 A P S S- 0 0 76 0, 0.0 2,-0.4 0, 0.0 44,-0.2 0.529 70.3-177.7 -75.6 157.6 -0.8 14.2 30.6 19 19 A K E -E 61 0C 50 42,-2.1 42,-2.3 -2,-0.1 2,-0.2 -0.995 28.4-124.7-121.6 133.6 -2.6 11.1 29.4 20 20 A I E +E 60 0C 100 -2,-0.4 40,-0.3 40,-0.2 3,-0.1 -0.563 32.1 172.4 -68.7 137.5 -1.2 8.5 27.1 21 21 A V E - 0 0 37 38,-3.3 2,-0.3 1,-0.5 -13,-0.2 0.326 58.7 -27.2-130.6 -1.3 -3.7 8.3 24.1 22 22 A G E -E 59 0C 22 37,-1.1 37,-3.7 -15,-0.1 -1,-0.5 -0.936 55.2-118.7 173.5 176.4 -1.7 6.0 21.8 23 23 A R E -E 58 0C 150 35,-0.3 2,-0.4 -2,-0.3 35,-0.3 -1.000 11.8-137.2-138.0 144.2 1.6 4.7 20.6 24 24 A V - 0 0 3 33,-3.5 2,-0.4 -2,-0.4 -20,-0.2 -0.774 27.6-160.5 -85.4 136.7 3.6 4.8 17.5 25 25 A V B +A 3 0A 47 -22,-2.4 -22,-3.1 -2,-0.4 32,-0.1 -0.967 31.3 160.2-122.8 139.7 5.2 1.4 16.8 26 26 A V + 0 0 11 -2,-0.4 2,-1.9 -24,-0.2 -1,-0.1 0.629 17.2 175.8-111.0 -51.8 8.2 0.6 14.5 27 27 A S S S+ 0 0 107 1,-0.1 2,-1.2 3,-0.0 -25,-0.1 -0.364 74.8 61.9 77.2 -57.6 9.2 -2.7 16.1 28 28 A D S S+ 0 0 114 -2,-1.9 2,-0.3 -27,-0.2 -1,-0.1 -0.471 90.6 150.7 -88.7 62.6 11.9 -3.5 13.6 29 29 A R - 0 0 74 -2,-1.2 -27,-0.0 1,-0.1 -3,-0.0 -0.688 46.4-108.6-108.2 147.6 13.4 -0.3 15.0 30 30 A I > - 0 0 76 -2,-0.3 3,-3.8 4,-0.1 2,-0.4 -0.492 40.7 -87.7 -83.6 139.1 17.0 0.8 15.3 31 31 A P T 3 S- 0 0 123 0, 0.0 51,-0.1 0, 0.0 3,-0.1 -0.695 108.4 -7.8 -74.5 124.8 19.1 1.2 18.5 32 32 A G T 3 S+ 0 0 66 -2,-0.4 2,-0.2 1,-0.2 -2,-0.1 -0.088 93.7 139.7-114.2 81.1 18.8 3.8 19.7 33 33 A S < - 0 0 5 -3,-3.8 2,-0.3 48,-0.1 48,-0.2 -0.504 40.5-137.7 -74.8 152.4 16.8 5.7 17.1 34 34 A K E -C 80 0B 37 46,-2.1 46,-2.9 -2,-0.2 2,-0.5 -0.778 6.0-125.3-116.6 157.9 14.1 7.9 18.4 35 35 A I E -C 79 0B 2 19,-2.2 2,-0.4 -2,-0.3 44,-0.2 -0.897 29.0-162.2-104.5 131.2 10.5 8.6 17.3 36 36 A K E -C 78 0B 80 42,-3.1 42,-2.1 -2,-0.5 2,-0.4 -0.914 7.2-159.8-118.5 139.6 9.8 12.2 16.7 37 37 A L E +C 77 0B 17 -2,-0.4 2,-0.3 40,-0.2 40,-0.2 -0.961 18.6 166.9-121.6 139.0 6.4 14.0 16.5 38 38 A Y E +C 76 0B 82 38,-2.1 38,-2.1 -2,-0.4 2,-0.2 -0.929 21.1 71.4-143.7 159.0 5.8 17.4 14.7 39 39 A G S >>>S- 0 0 8 -2,-0.3 3,-2.4 36,-0.2 5,-1.8 -0.655 83.7 -21.9 127.1-175.7 3.0 19.6 13.5 40 40 A K B 345S+g 44 0D 112 34,-0.5 34,-0.3 1,-0.3 5,-0.2 -0.528 129.6 34.7 -65.7 118.7 0.2 21.9 14.6 41 41 A G T 345S+ 0 0 0 3,-2.6 9,-2.3 -2,-0.4 8,-1.0 0.170 124.8 44.2 114.6 -13.5 -0.6 20.8 18.1 42 42 A V T <45S- 0 0 26 -3,-2.4 6,-2.4 2,-0.4 -2,-0.2 0.633 132.6 -8.5-122.3 -83.3 3.1 20.1 18.9 43 43 A D T <5S+ 0 0 65 -4,-0.9 2,-0.3 4,-0.2 -3,-0.2 0.372 127.1 59.4-103.7 3.2 5.7 22.5 17.8 44 44 A Q B S- 0 0 39 0, 0.0 3,-0.7 0, 0.0 -2,-0.2 0.258 98.5-157.7 -79.2 125.3 -1.2 25.5 19.3 47 47 A K T 3 + 0 0 128 1,-0.2 -4,-0.2 -4,-0.2 -5,-0.2 -0.385 59.6 9.7 -74.1 138.8 2.1 24.4 20.8 48 48 A G T 3 S+ 0 0 39 -6,-2.4 -1,-0.2 2,-0.2 -6,-0.2 0.582 78.1 122.5 79.6 10.3 2.5 21.6 23.3 49 49 A I S < S+ 0 0 6 -8,-1.0 13,-2.6 -3,-0.7 14,-0.4 0.863 80.6 28.7 -69.0 -37.2 -1.0 20.0 23.2 50 50 A F E +F 61 0C 2 -9,-2.3 2,-0.3 11,-0.2 11,-0.2 -0.915 68.5 175.7-122.5 150.2 0.6 16.6 22.2 51 51 A K E -F 60 0C 92 9,-2.3 9,-2.5 -2,-0.3 2,-0.4 -0.954 16.1-140.9-143.8 168.6 3.9 15.0 22.9 52 52 A I E -F 59 0C 32 -2,-0.3 2,-0.7 7,-0.2 7,-0.2 -0.978 20.2-123.6-133.1 143.6 5.6 11.8 22.3 53 53 A N > - 0 0 65 5,-2.7 4,-1.9 -2,-0.4 5,-0.1 -0.793 26.7-147.2 -79.2 119.6 7.9 9.6 24.4 54 54 A E T 4 S+ 0 0 93 -2,-0.7 -19,-2.2 1,-0.2 -1,-0.1 0.637 91.5 39.9 -71.8 -12.0 10.8 9.4 22.0 55 55 A N T 4 S+ 0 0 101 -21,-0.2 -1,-0.2 3,-0.1 -22,-0.1 0.869 124.8 29.0 -97.5 -56.3 11.7 5.9 23.1 56 56 A S T 4 S- 0 0 44 2,-0.1 -2,-0.2 -21,-0.1 3,-0.1 0.674 95.0-131.9 -79.1 -19.3 8.4 4.0 23.6 57 57 A G < + 0 0 0 -4,-1.9 -33,-3.5 1,-0.3 2,-0.4 0.648 51.0 154.7 69.6 16.4 6.5 6.1 21.0 58 58 A E E -E 23 0C 63 -35,-0.3 -5,-2.7 -5,-0.1 2,-0.4 -0.636 33.9-145.9 -73.7 133.3 3.6 6.6 23.4 59 59 A V E -EF 22 52C 1 -37,-3.7 -38,-3.3 -2,-0.4 -37,-1.1 -0.820 16.0-167.4-104.1 138.9 1.7 9.8 22.5 60 60 A S E -EF 20 51C 8 -9,-2.5 -9,-2.3 -2,-0.4 2,-0.4 -0.950 17.1-140.6-129.3 142.3 0.2 11.9 25.2 61 61 A V E -EF 19 50C 0 -42,-2.3 -42,-2.1 -2,-0.4 -11,-0.2 -0.830 11.0-156.5 -96.3 146.1 -2.3 14.8 25.3 62 62 A T + 0 0 46 -13,-2.6 2,-0.3 -2,-0.4 -45,-0.1 0.554 64.6 8.7-106.0 -6.8 -1.5 17.5 27.8 63 63 A K S S- 0 0 113 -14,-0.4 2,-0.1 -44,-0.1 -50,-0.1 -0.942 88.6 -70.6-162.2 171.4 -4.8 19.2 28.5 64 64 A A - 0 0 43 -2,-0.3 2,-0.3 -51,-0.1 -53,-0.1 -0.467 50.4-141.1 -72.1 140.4 -8.6 18.9 27.9 65 65 A L - 0 0 9 -55,-0.4 -53,-2.3 -2,-0.1 2,-0.5 -0.719 4.9-143.5-107.0 158.9 -9.7 19.6 24.3 66 66 A D >> - 0 0 71 -2,-0.3 4,-1.7 -55,-0.2 3,-0.8 -0.980 4.3-156.0-123.3 115.7 -12.7 21.5 23.0 67 67 A R T 34 S+ 0 0 104 -2,-0.5 -1,-0.1 1,-0.3 30,-0.1 0.861 94.3 57.2 -60.6 -32.9 -14.1 20.0 19.7 68 68 A E T 34 S+ 0 0 173 1,-0.1 -1,-0.3 2,-0.1 31,-0.0 0.769 108.2 47.2 -70.3 -31.9 -15.7 23.3 18.8 69 69 A A T <4 S- 0 0 73 -3,-0.8 -2,-0.2 1,-0.3 -1,-0.1 0.979 137.2 -5.9 -70.2 -65.2 -12.3 25.0 18.9 70 70 A I < - 0 0 50 -4,-1.7 -1,-0.3 1,-0.1 -4,-0.1 -0.985 61.0-170.3-133.8 117.9 -10.2 22.4 16.9 71 71 A P + 0 0 67 0, 0.0 26,-2.4 0, 0.0 2,-0.3 0.585 69.6 8.3 -90.2 -4.8 -12.0 19.2 15.8 72 72 A S E - D 0 96B 65 24,-0.2 2,-0.3 -5,-0.1 24,-0.2 -0.985 55.8-151.4-166.9 160.1 -8.9 17.4 14.6 73 73 A Y E - D 0 95B 13 22,-2.8 22,-3.0 -2,-0.3 2,-0.5 -0.968 5.1-158.9-133.0 147.6 -5.1 17.5 14.4 74 74 A Q E + D 0 94B 89 -2,-0.3 -34,-0.5 -34,-0.3 20,-0.2 -0.931 20.9 178.1-133.8 110.5 -2.8 16.0 11.8 75 75 A L E - D 0 93B 4 18,-2.5 18,-2.7 -2,-0.5 2,-0.4 -0.580 24.3-125.5-109.2 167.4 0.7 15.5 12.9 76 76 A Q E -CD 38 92B 59 -38,-2.1 -38,-2.1 16,-0.2 2,-0.4 -0.936 22.2-167.7-114.0 136.1 3.8 14.0 11.3 77 77 A V E +CD 37 91B 0 14,-2.3 14,-1.5 -2,-0.4 2,-0.3 -0.965 13.8 158.8-124.3 139.6 5.9 11.1 12.9 78 78 A E E -C 36 0B 19 -42,-2.1 -42,-3.1 -2,-0.4 2,-0.4 -0.945 35.3-118.3-147.4 172.1 9.3 9.9 12.0 79 79 A T E -CD 35 88B 0 9,-2.9 8,-2.7 -2,-0.3 9,-0.8 -0.929 31.7-171.6-109.7 141.7 12.2 8.0 13.4 80 80 A T E -CD 34 86B 0 -46,-2.9 -46,-2.1 -2,-0.4 6,-0.2 -0.861 22.1-115.7-125.1 164.1 15.6 9.6 13.7 81 81 A D > - 0 0 58 4,-2.0 3,-3.0 -2,-0.3 -48,-0.1 -0.377 56.1 -79.0 -81.9 175.8 19.1 8.5 14.6 82 82 A E T 3 S+ 0 0 143 1,-0.3 -1,-0.1 2,-0.1 -49,-0.1 0.695 134.6 56.9 -48.4 -20.0 20.8 9.8 17.7 83 83 A N T 3 S- 0 0 138 2,-0.2 -1,-0.3 1,-0.0 3,-0.1 0.209 115.6-113.2-102.6 16.7 21.5 13.0 15.7 84 84 A G < + 0 0 30 -3,-3.0 2,-0.3 1,-0.2 -2,-0.1 0.540 68.8 146.7 65.7 2.7 17.9 13.7 14.9 85 85 A K - 0 0 139 1,-0.1 -4,-2.0 -4,-0.1 -1,-0.2 -0.574 56.7-102.3 -70.4 135.0 18.6 12.9 11.3 86 86 A T E + D 0 80B 60 -2,-0.3 -6,-0.2 -6,-0.2 3,-0.1 -0.309 48.1 160.2 -64.5 131.6 15.6 11.3 9.6 87 87 A I E S+ 0 0 71 -8,-2.7 2,-0.3 1,-0.5 -7,-0.2 0.771 73.5 12.8-106.1 -63.6 15.6 7.5 8.9 88 88 A E E S- D 0 79B 30 -9,-0.8 -9,-2.9 -87,-0.1 -1,-0.5 -0.911 94.0-124.3-119.3 141.1 12.0 6.6 8.4 89 89 A G E - 0 0 40 -2,-0.3 -11,-0.2 1,-0.3 2,-0.1 -0.465 17.6 -42.1 124.0 157.9 9.3 9.2 7.9 90 90 A P E + 0 0 81 0, 0.0 2,-0.3 0, 0.0 -1,-0.3 0.498 46.8 156.9 -98.7 170.5 7.2 11.0 7.7 91 91 A V E - D 0 77B 48 -14,-1.5 -14,-2.3 -3,-0.1 2,-0.1 -0.989 42.2-104.4-140.5 145.7 3.8 9.4 8.2 92 92 A D E - D 0 76B 91 -2,-0.3 2,-0.5 -16,-0.2 -16,-0.2 -0.372 21.4-164.5 -68.7 142.6 0.6 11.0 9.3 93 93 A L E - D 0 75B 2 -18,-2.7 -18,-2.5 -2,-0.1 2,-0.4 -0.958 15.7-159.1-118.7 110.4 -0.8 10.7 12.8 94 94 A E E - D 0 74B 85 -2,-0.5 -87,-2.3 -90,-0.5 2,-0.5 -0.766 7.1-168.5 -96.5 136.7 -4.4 11.8 12.7 95 95 A I E -bD 7 73B 2 -22,-3.0 -22,-2.8 -2,-0.4 2,-0.5 -0.987 3.0-165.0-123.5 120.5 -6.1 12.8 16.0 96 96 A L E -bD 8 72B 84 -89,-2.8 -87,-2.6 -2,-0.5 2,-0.7 -0.900 12.1-146.6-107.4 126.7 -9.8 13.3 16.0 97 97 A V E -b 9 0B 0 -26,-2.4 2,-0.2 -2,-0.5 -89,-0.1 -0.866 25.5-153.8 -93.3 115.3 -11.5 15.1 18.9 98 98 A I E b 10 0B 64 -89,-1.7 -87,-2.4 -2,-0.7 -31,-0.2 -0.530 360.0 360.0 -98.5 156.1 -14.8 13.5 19.2 99 99 A D 0 0 148 -2,-0.2 -1,-0.1 -89,-0.2 -33,-0.0 -0.332 360.0 360.0 -61.3 360.0 -18.0 15.0 20.7