==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=6-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSLATION 22-OCT-01 1K81 . COMPND 2 MOLECULE: PROBABLE TRANSLATION INITIATION FACTOR 2 BETA . SOURCE 2 ORGANISM_SCIENTIFIC: METHANOCALDOCOCCUS JANNASCHII; . AUTHOR S.CHO,D.W.HOFFMAN . 36 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3804.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 17 47.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 14 38.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 2.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 2.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 8.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 2.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 2.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 108 A V 0 0 174 0, 0.0 3,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -54.5 -4.3 -0.8 -4.0 2 109 A I + 0 0 141 1,-0.3 2,-0.4 2,-0.1 0, 0.0 0.943 360.0 16.3 -65.4 -49.5 -1.0 -0.1 -2.2 3 110 A C + 0 0 49 1,-0.1 3,-0.4 4,-0.1 4,-0.3 -0.888 64.8 157.0-131.3 99.5 0.8 0.8 -5.3 4 111 A R S S+ 0 0 220 -2,-0.4 3,-0.4 -3,-0.3 -1,-0.1 0.793 80.0 49.6 -90.7 -33.8 -1.3 1.6 -8.4 5 112 A E S S+ 0 0 197 1,-0.2 -1,-0.2 2,-0.0 -2,-0.0 -0.098 98.9 72.6 -96.5 34.4 1.3 3.7 -10.2 6 113 A C S S- 0 0 25 -3,-0.4 2,-0.6 1,-0.2 -1,-0.2 0.634 72.3-169.4-116.4 -29.3 3.9 1.0 -9.8 7 114 A G - 0 0 62 -3,-0.4 -1,-0.2 -4,-0.3 -4,-0.1 -0.626 67.3 -4.7 77.6-114.9 2.8 -1.6 -12.2 8 115 A K S S+ 0 0 208 -2,-0.6 -1,-0.1 18,-0.0 2,-0.0 -0.740 90.8 136.0-119.1 81.3 4.8 -4.8 -11.7 9 116 A P - 0 0 47 0, 0.0 2,-0.3 0, 0.0 17,-0.2 0.061 51.5 -88.1-101.1-148.2 7.5 -4.1 -9.1 10 117 A D E -A 25 0A 108 15,-1.8 15,-1.9 -2,-0.0 2,-0.4 -0.946 26.1-147.3-131.4 152.6 8.7 -6.0 -6.0 11 118 A T E +A 24 0A 107 -2,-0.3 2,-0.4 13,-0.2 13,-0.2 -0.978 15.7 175.6-126.7 132.2 7.6 -6.1 -2.4 12 119 A K E -A 23 0A 135 11,-2.2 11,-2.3 -2,-0.4 2,-0.4 -0.995 7.0-168.3-132.8 137.4 9.8 -6.7 0.7 13 120 A I E -A 22 0A 122 -2,-0.4 2,-0.4 9,-0.2 9,-0.2 -0.982 3.2-175.5-128.5 136.2 8.8 -6.6 4.4 14 121 A I E -A 21 0A 80 7,-1.9 7,-2.0 -2,-0.4 2,-0.4 -0.988 2.2-170.5-130.2 136.9 11.0 -6.5 7.4 15 122 A K E -A 20 0A 130 -2,-0.4 2,-0.4 5,-0.2 5,-0.2 -0.981 2.8-177.2-128.3 136.5 10.1 -6.6 11.1 16 123 A E E > -A 19 0A 133 3,-1.7 3,-1.7 -2,-0.4 2,-1.1 -0.991 63.5 -34.5-130.4 136.8 12.3 -6.1 14.2 17 124 A G T 3 S- 0 0 68 -2,-0.4 -2,-0.0 1,-0.2 3,-0.0 -0.387 127.0 -27.7 58.7 -95.9 11.2 -6.4 17.8 18 125 A R T 3 S+ 0 0 184 -2,-1.1 2,-0.4 18,-0.1 -1,-0.2 -0.060 115.2 93.8-145.4 35.6 7.6 -5.1 17.6 19 126 A V E < -A 16 0A 85 -3,-1.7 -3,-1.7 15,-0.1 2,-0.4 -0.998 55.9-150.1-133.9 136.8 7.6 -2.8 14.6 20 127 A H E -AB 15 33A 36 13,-1.7 13,-2.1 -2,-0.4 2,-0.4 -0.886 11.2-172.7-109.6 137.5 6.7 -3.5 11.0 21 128 A L E -AB 14 32A 64 -7,-2.0 -7,-1.9 -2,-0.4 2,-0.4 -0.987 7.0-157.2-129.5 137.2 8.2 -1.7 8.0 22 129 A L E -AB 13 31A 37 9,-2.1 9,-2.0 -2,-0.4 2,-0.4 -0.934 9.0-174.8-116.6 136.4 7.2 -2.0 4.4 23 130 A K E -AB 12 30A 111 -11,-2.3 -11,-2.2 -2,-0.4 2,-0.4 -0.989 6.8-162.2-130.2 137.7 9.3 -1.2 1.5 24 131 A C E > -AB 11 29A 20 5,-2.0 5,-1.5 -2,-0.4 2,-0.5 -0.959 10.5-146.8-119.8 136.0 8.4 -1.2 -2.2 25 132 A M E 5S+A 10 0A 116 -15,-1.9 -15,-1.8 -2,-0.4 -2,-0.0 -0.889 77.6 42.7-109.3 130.7 11.0 -1.3 -4.9 26 133 A A T 5S+ 0 0 71 -2,-0.5 -1,-0.2 -17,-0.2 -18,-0.0 -0.286 123.9 35.7 133.6 -38.3 10.4 0.4 -8.2 27 134 A C T 5S- 0 0 63 -3,-0.1 -2,-0.2 2,-0.1 -21,-0.0 0.448 103.3-127.8-114.1 -11.4 9.0 3.6 -6.8 28 135 A G T 5 + 0 0 49 -4,-0.4 2,-0.4 1,-0.2 -3,-0.2 0.993 47.8 162.6 59.2 66.9 11.2 3.7 -3.7 29 136 A A E < -B 24 0A 43 -5,-1.5 -5,-2.0 2,-0.0 2,-0.4 -0.969 23.0-166.9-123.3 137.4 8.4 4.0 -1.1 30 137 A I E -B 23 0A 112 -2,-0.4 -7,-0.2 -7,-0.2 -9,-0.0 -0.964 4.8-175.3-123.2 135.9 8.6 3.4 2.7 31 138 A R E -B 22 0A 157 -9,-2.0 -9,-2.1 -2,-0.4 2,-0.4 -0.988 17.6-137.3-130.3 137.1 5.6 3.1 5.0 32 139 A P E +B 21 0A 91 0, 0.0 2,-0.3 0, 0.0 -11,-0.2 -0.731 29.3 167.9 -93.7 134.8 5.5 2.7 8.8 33 140 A I E +B 20 0A 68 -13,-2.1 -13,-1.7 -2,-0.4 2,-0.3 -0.975 12.2 175.4-144.3 156.8 3.1 0.3 10.5 34 141 A R + 0 0 191 -2,-0.3 -15,-0.1 -15,-0.2 -16,-0.0 -0.858 14.4 166.5-165.8 126.5 2.5 -1.3 13.9 35 142 A M 0 0 142 -2,-0.3 -1,-0.1 -17,-0.1 -16,-0.1 0.721 360.0 360.0-109.4 -36.9 -0.2 -3.6 15.3 36 143 A I 0 0 158 -18,-0.2 -18,-0.1 0, 0.0 -2,-0.0 0.494 360.0 360.0 -90.2 360.0 1.4 -4.8 18.5