==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN 02-SEP-08 2K84 . COMPND 2 MOLECULE: P9; . SOURCE 2 SYNTHETIC: YES; . AUTHOR A.SHARMA,K.BRUNS,R.ROEDER,P.HENKLEIN,J.VOTTELER,V.WRAY, . 30 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3283.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 11 36.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 13.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 6 20.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 3.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 22 A L 0 0 191 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-178.2 -17.9 -8.7 -0.5 2 23 A Y - 0 0 208 2,-0.1 0, 0.0 3,-0.0 0, 0.0 0.203 360.0 -46.0 54.7 174.7 -18.8 -5.1 0.3 3 24 A P - 0 0 93 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.039 62.0 -96.5 -61.6-178.2 -16.1 -2.3 0.2 4 25 A D - 0 0 102 1,-0.1 -2,-0.1 0, 0.0 0, 0.0 0.613 46.0-140.1 -73.9 -11.6 -12.8 -2.7 1.8 5 26 A L S S+ 0 0 154 1,-0.2 -1,-0.1 2,-0.1 -3,-0.0 0.544 93.3 64.6 61.5 6.4 -14.6 -0.8 4.6 6 27 A S + 0 0 26 3,-0.1 -1,-0.2 1,-0.0 6,-0.0 0.711 47.6 142.2-115.8 -63.8 -11.2 0.9 4.8 7 28 A E S S+ 0 0 109 1,-0.2 -2,-0.1 2,-0.1 -1,-0.0 0.603 87.6 44.3 20.5 29.2 -10.6 2.8 1.5 8 29 A I S S+ 0 0 132 0, 0.0 -1,-0.2 0, 0.0 0, 0.0 -0.118 121.9 34.7 171.1 54.1 -9.0 5.5 3.8 9 30 A K S > S+ 0 0 121 0, 0.0 4,-0.5 0, 0.0 -2,-0.1 -0.175 118.1 52.8 176.6 -42.3 -7.1 3.2 6.0 10 31 A K H > S+ 0 0 71 2,-0.3 4,-1.3 3,-0.2 5,-0.2 0.954 113.2 43.0 -70.7 -55.8 -6.3 0.8 3.1 11 32 A E H > S+ 0 0 113 1,-0.3 4,-2.2 2,-0.3 -1,-0.2 0.785 118.4 47.4 -61.2 -25.9 -5.0 3.6 1.0 12 33 A Y H 4 S+ 0 0 131 2,-0.2 4,-0.4 1,-0.2 -1,-0.3 0.720 112.9 48.3 -83.6 -25.7 -3.4 4.6 4.2 13 34 A N H < S+ 0 0 103 -4,-0.5 -2,-0.3 2,-0.1 -1,-0.2 0.546 118.7 39.9 -87.9 -13.7 -2.3 1.1 4.6 14 35 A V H >X S+ 0 0 32 -4,-1.3 4,-6.0 2,-0.1 3,-1.0 0.742 101.7 65.7-105.3 -34.5 -1.0 1.1 1.1 15 36 A K T 3< S+ 0 0 109 -4,-2.2 -3,-0.1 1,-0.3 -2,-0.1 0.795 103.9 51.5 -58.1 -28.1 0.6 4.5 0.8 16 37 A E T 34 S+ 0 0 97 -4,-0.4 -1,-0.3 2,-0.2 -2,-0.1 0.710 119.6 35.2 -79.8 -23.2 3.0 3.2 3.4 17 38 A K T X> S+ 0 0 106 -3,-1.0 4,-2.1 2,-0.2 3,-1.6 0.736 108.8 62.6 -99.0 -32.5 3.6 0.2 1.2 18 39 A D T 3< S+ 0 0 104 -4,-6.0 -3,-0.2 1,-0.3 -2,-0.2 0.330 108.9 48.2 -74.7 9.4 3.2 2.0 -2.0 19 40 A Q T 34 S+ 0 0 101 -5,-0.3 -1,-0.3 3,-0.0 -2,-0.2 0.319 117.7 34.9-128.2 -0.9 6.3 3.8 -0.7 20 41 A V T X4 S+ 0 0 70 -3,-1.6 3,-1.4 2,-0.1 5,-0.3 0.683 94.6 74.0-122.6 -44.9 8.4 0.9 0.4 21 42 A E G >X S+ 0 0 72 -4,-2.1 4,-3.0 1,-0.3 3,-1.4 0.827 97.2 61.1 -41.7 -32.9 7.9 -2.0 -2.1 22 43 A D G 34>S+ 0 0 81 -5,-0.3 5,-2.0 1,-0.3 6,-0.4 0.938 95.5 56.3 -59.2 -50.7 10.0 0.2 -4.3 23 44 A L G <45S+ 0 0 116 -3,-1.4 -1,-0.3 3,-0.3 -2,-0.2 0.250 118.6 35.5 -71.1 19.0 12.9 0.1 -2.0 24 45 A N T <45S+ 0 0 105 -3,-1.4 -2,-0.2 -4,-0.2 -1,-0.2 0.463 131.2 28.7-136.7 -33.3 12.7 -3.7 -2.4 25 46 A L T <5S+ 0 0 143 -4,-3.0 -2,-0.2 -5,-0.3 -3,-0.1 -0.320 141.4 19.1-126.9 45.1 11.7 -4.0 -6.0 26 47 A D T 5S+ 0 0 41 -4,-0.3 -3,-0.3 -5,-0.0 4,-0.2 0.167 113.3 65.8 178.4 -25.6 13.3 -0.8 -7.2 27 48 A S S