==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-JAN-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN 12-SEP-08 2K8J . COMPND 2 MOLECULE: P7TM2; . SOURCE 2 SYNTHETIC: YES; . AUTHOR R.MONTSERRET,F.PENIN . 29 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3199.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 16 55.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 6.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 10.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 11 37.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 X R 0 0 278 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 39.1 21.1 -6.4 -6.1 2 2 X L - 0 0 171 1,-0.1 0, 0.0 5,-0.0 0, 0.0 0.981 360.0-136.5 56.8 84.0 18.3 -8.6 -4.5 3 3 X V - 0 0 59 1,-0.1 2,-0.8 4,-0.1 -1,-0.1 -0.323 12.0-120.4 -68.3 153.8 17.4 -6.8 -1.2 4 4 X P S S- 0 0 126 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 -0.265 74.5 -65.7 -88.9 47.4 17.0 -8.9 2.0 5 5 X G S >>>S+ 0 0 36 -2,-0.8 3,-1.9 4,-0.0 4,-1.6 0.056 116.7 104.9 94.8 -28.2 13.3 -7.7 2.5 6 6 X A H 3>5S+ 0 0 70 1,-0.3 4,-0.7 2,-0.2 5,-0.1 0.942 93.4 28.7 -51.3 -53.1 14.3 -4.0 3.1 7 7 X A H 345S+ 0 0 31 3,-0.1 -1,-0.3 2,-0.1 -4,-0.1 -0.010 117.0 66.4 -98.2 30.5 13.1 -2.9 -0.3 8 8 X Y H <>5S+ 0 0 159 -3,-1.9 4,-2.4 3,-0.1 -2,-0.2 0.753 104.3 33.2-112.6 -59.4 10.4 -5.7 -0.5 9 9 X A H X5S+ 0 0 70 -4,-1.6 4,-1.0 1,-0.2 5,-0.2 0.931 118.7 55.1 -65.2 -43.4 7.8 -4.9 2.2 10 10 X L H X S+ 0 0 57 0, 0.0 4,-2.7 0, 0.0 -1,-0.2 0.787 109.7 56.4 -65.8 -25.9 0.0 -0.0 -3.1 16 16 X L H > S+ 0 0 91 2,-0.2 4,-2.9 -4,-0.2 -2,-0.2 0.956 111.1 41.6 -70.5 -47.4 -1.8 -1.5 -0.1 17 17 X L H X S+ 0 0 102 -4,-2.2 4,-2.9 2,-0.2 5,-0.2 0.912 115.1 52.4 -64.6 -38.9 -2.2 1.9 1.6 18 18 X L H X S+ 0 0 71 -4,-2.5 4,-1.7 -5,-0.3 -2,-0.2 0.942 111.2 46.4 -61.2 -45.1 -3.0 3.3 -1.8 19 19 X L H < S+ 0 0 111 -4,-2.7 -2,-0.2 1,-0.2 -1,-0.2 0.915 113.9 48.7 -63.1 -41.6 -5.7 0.6 -2.1 20 20 X L H >< S+ 0 0 99 -4,-2.9 3,-1.2 1,-0.2 -2,-0.2 0.872 106.1 57.2 -67.1 -36.9 -6.9 1.4 1.4 21 21 X L H 3< S+ 0 0 138 -4,-2.9 -1,-0.2 1,-0.3 -2,-0.2 0.897 121.6 27.4 -62.4 -39.2 -7.0 5.2 0.6 22 22 X A T 3< S+ 0 0 80 -4,-1.7 -1,-0.3 -5,-0.2 -2,-0.2 -0.238 90.9 144.5-115.7 43.2 -9.4 4.5 -2.3 23 23 X L < - 0 0 95 -3,-1.2 -3,-0.1 1,-0.0 -4,-0.0 -0.704 40.7-138.8 -87.6 132.6 -11.1 1.3 -0.9 24 24 X P - 0 0 93 0, 0.0 5,-0.1 0, 0.0 -2,-0.0 -0.512 23.0-102.7 -87.1 156.1 -14.8 0.8 -1.6 25 25 X P > - 0 0 73 0, 0.0 3,-1.8 0, 0.0 0, 0.0 -0.236 35.1-103.2 -72.7 164.9 -17.3 -0.5 0.9 26 26 X R T 3 S+ 0 0 257 1,-0.3 3,-0.0 2,-0.1 0, 0.0 0.829 125.6 43.7 -60.1 -30.7 -18.6 -4.2 0.8 27 27 X A T 3 S- 0 0 71 1,-0.1 2,-2.7 0, 0.0 -1,-0.3 0.272 105.2-130.4 -98.3 12.3 -21.9 -3.0 -0.8 28 28 X Y < 0 0 179 -3,-1.8 -1,-0.1 1,-0.1 -2,-0.1 -0.214 360.0 360.0 70.6 -50.9 -20.1 -0.5 -3.2 29 29 X A 0 0 112 -2,-2.7 -1,-0.1 -5,-0.1 -3,-0.0 -0.446 360.0 360.0 70.5 360.0 -22.5 2.4 -2.1