==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=10-MAR-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 23-OCT-08 2K9S . COMPND 2 MOLECULE: ARABINOSE OPERON REGULATORY PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR M.E.RODGERS,R.F.SCHLEIF . 107 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7590.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 82 76.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 4.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 13 12.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 61 57.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 2.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 2 0 0 0 0 3 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 96 0, 0.0 2,-0.2 0, 0.0 40,-0.1 0.000 360.0 360.0 360.0 116.2 2.1 -0.0 -1.2 2 2 A D > - 0 0 61 38,-0.1 4,-2.8 1,-0.1 5,-0.2 -0.486 360.0-121.6 -79.1 148.5 0.4 -1.2 -4.4 3 3 A N H > S+ 0 0 121 1,-0.2 4,-1.8 2,-0.2 5,-0.1 0.907 114.8 51.8 -53.8 -45.4 2.0 -3.8 -6.6 4 4 A R H > S+ 0 0 128 1,-0.2 4,-0.8 2,-0.2 -1,-0.2 0.900 112.3 45.6 -59.3 -42.6 2.0 -1.4 -9.6 5 5 A V H >> S+ 0 0 4 1,-0.2 4,-0.8 2,-0.2 3,-0.5 0.876 108.4 56.3 -68.8 -38.6 3.7 1.3 -7.5 6 6 A R H >X S+ 0 0 133 -4,-2.8 4,-0.7 1,-0.2 3,-0.7 0.847 100.0 60.2 -62.0 -34.6 6.2 -1.2 -6.1 7 7 A E H >X S+ 0 0 103 -4,-1.8 4,-1.0 1,-0.2 3,-0.9 0.847 94.9 63.2 -62.1 -34.7 7.3 -2.0 -9.6 8 8 A A H < S+ 0 0 71 -4,-2.7 3,-1.2 1,-0.2 -1,-0.2 0.905 104.9 46.5 -57.3 -44.1 16.5 1.6 -8.3 14 14 A D H 3< S+ 0 0 135 -4,-1.2 3,-0.5 -3,-0.3 -1,-0.2 0.845 116.9 43.9 -67.5 -34.5 18.5 1.0 -11.5 15 15 A H T 3< S+ 0 0 57 -4,-1.5 -1,-0.3 1,-0.2 -2,-0.2 0.151 80.0 110.5 -95.7 17.9 18.6 4.7 -12.2 16 16 A L S < S+ 0 0 40 -3,-1.2 -1,-0.2 1,-0.2 -2,-0.1 0.778 85.4 41.2 -62.2 -26.4 19.4 5.5 -8.6 17 17 A A S S+ 0 0 60 -3,-0.5 -1,-0.2 -4,-0.2 -2,-0.1 0.666 94.4 104.2 -93.5 -21.0 22.9 6.6 -9.8 18 18 A D - 0 0 71 -4,-0.1 3,-0.1 1,-0.1 -3,-0.0 -0.277 58.3-154.8 -62.0 146.7 21.6 8.4 -12.8 19 19 A S S S+ 0 0 88 1,-0.2 2,-1.0 62,-0.0 -1,-0.1 0.901 79.6 63.6 -88.8 -50.4 21.5 12.2 -12.7 20 20 A N S S- 0 0 140 2,-0.0 2,-0.5 1,-0.0 -1,-0.2 -0.676 70.7-174.1 -81.8 103.7 18.8 13.0 -15.2 21 21 A F - 0 0 50 -2,-1.0 2,-0.6 -3,-0.1 3,-0.1 -0.873 8.2-165.5-103.9 127.4 15.6 11.5 -13.8 22 22 A D >> - 0 0 90 -2,-0.5 3,-1.2 1,-0.1 4,-0.9 -0.928 13.3-160.5-116.0 110.7 12.4 11.5 -15.9 23 23 A I H 3> S+ 0 0 76 -2,-0.6 4,-1.7 1,-0.3 5,-0.2 0.756 90.1 71.5 -57.2 -24.2 9.2 10.8 -14.1 24 24 A A H 3> S+ 0 0 44 1,-0.2 4,-2.2 2,-0.2 -1,-0.3 0.912 94.6 50.3 -58.7 -44.9 7.7 10.0 -17.5 25 25 A S H <> S+ 0 0 38 -3,-1.2 4,-1.9 1,-0.2 -1,-0.2 0.806 105.5 59.4 -64.2 -29.5 9.8 6.8 -17.7 26 26 A V H X S+ 0 0 2 -4,-0.9 4,-0.9 2,-0.2 -1,-0.2 0.935 108.8 41.2 -64.9 -48.0 8.5 5.8 -14.3 27 27 A A H ><>S+ 0 0 2 -4,-1.7 5,-2.9 1,-0.2 3,-0.5 0.886 113.5 53.9 -67.6 -39.9 4.8 5.9 -15.4 28 28 A Q H ><5S+ 0 0 152 -4,-2.2 3,-2.1 1,-0.2 -1,-0.2 0.866 100.1 61.7 -62.8 -37.2 5.6 4.2 -18.7 29 29 A H H 3<5S+ 0 0 75 -4,-1.9 -1,-0.2 1,-0.3 -2,-0.2 0.846 108.4 43.0 -58.0 -34.9 7.3 1.4 -16.9 30 30 A V T <<5S- 0 0 19 -4,-0.9 -1,-0.3 -3,-0.5 -2,-0.2 0.172 116.0-116.2 -96.6 16.4 4.0 0.6 -15.2 31 31 A C T < 5S+ 0 0 122 -3,-2.1 2,-0.3 1,-0.2 -3,-0.2 0.852 82.3 108.8 51.5 37.0 2.1 1.0 -18.4 32 32 A L S - 0 0 75 -2,-0.3 4,-2.1 -3,-0.1 5,-0.2 -0.298 30.2-122.5 -74.0 159.9 0.2 7.7 -17.0 34 34 A P H > S+ 0 0 57 0, 0.0 4,-2.8 0, 0.0 5,-0.2 0.876 111.0 48.4 -69.7 -39.4 2.4 10.0 -14.8 35 35 A S H > S+ 0 0 92 2,-0.2 4,-2.1 1,-0.2 5,-0.1 0.930 115.1 43.7 -67.6 -46.9 -0.5 11.9 -13.3 36 36 A R H > S+ 0 0 171 2,-0.2 4,-1.6 1,-0.2 -1,-0.2 0.907 119.2 43.6 -65.2 -43.1 -2.5 8.7 -12.4 37 37 A L H X S+ 0 0 5 -4,-2.1 4,-2.6 2,-0.2 -2,-0.2 0.915 112.6 51.9 -68.8 -44.3 0.6 7.0 -11.1 38 38 A S H X S+ 0 0 43 -4,-2.8 4,-2.3 1,-0.2 5,-0.2 0.884 106.9 54.9 -59.9 -39.9 1.9 10.0 -9.2 39 39 A H H X S+ 0 0 118 -4,-2.1 4,-1.0 1,-0.2 -1,-0.2 0.936 114.4 38.4 -59.5 -48.9 -1.6 10.3 -7.5 40 40 A L H X S+ 0 0 52 -4,-1.6 4,-3.1 2,-0.2 5,-0.3 0.819 111.0 62.0 -71.9 -31.5 -1.5 6.8 -6.2 41 41 A F H X S+ 0 0 4 -4,-2.6 4,-3.2 1,-0.2 6,-0.4 0.942 107.1 42.0 -59.3 -50.2 2.3 7.1 -5.5 42 42 A R H X S+ 0 0 158 -4,-2.3 4,-0.6 3,-0.2 -1,-0.2 0.769 116.4 51.5 -68.5 -25.8 1.7 9.9 -2.9 43 43 A Q H < S+ 0 0 145 -4,-1.0 -2,-0.2 -5,-0.2 -1,-0.2 0.878 118.6 34.5 -78.1 -40.4 -1.3 8.0 -1.6 44 44 A Q H < S+ 0 0 81 -4,-3.1 -2,-0.2 1,-0.1 -3,-0.2 0.864 130.3 34.6 -81.5 -39.5 0.5 4.7 -1.1 45 45 A L H < S- 0 0 32 -4,-3.2 -3,-0.2 -5,-0.3 -2,-0.2 0.639 96.3-140.0 -88.5 -16.9 3.9 6.2 -0.2 46 46 A G S < S+ 0 0 53 -4,-0.6 2,-0.3 -5,-0.4 -4,-0.2 0.591 75.7 67.4 67.8 8.5 2.2 9.1 1.6 47 47 A I S S- 0 0 51 -6,-0.4 -2,-0.2 0, 0.0 -1,-0.2 -0.925 93.4 -78.4-149.4 172.3 4.9 11.4 0.2 48 48 A S >> - 0 0 67 -2,-0.3 4,-2.6 1,-0.1 3,-0.5 -0.477 36.6-122.4 -77.4 146.6 6.2 12.8 -3.1 49 49 A V H 3> S+ 0 0 17 1,-0.3 4,-2.2 2,-0.2 5,-0.2 0.875 114.5 55.2 -54.0 -40.1 8.3 10.6 -5.4 50 50 A L H 3> S+ 0 0 123 1,-0.2 4,-1.4 2,-0.2 -1,-0.3 0.868 110.4 45.4 -62.1 -37.4 11.1 13.2 -5.2 51 51 A S H <> S+ 0 0 55 -3,-0.5 4,-3.0 2,-0.2 -2,-0.2 0.905 110.0 53.3 -72.8 -43.2 11.0 12.9 -1.4 52 52 A W H X S+ 0 0 25 -4,-2.6 4,-2.4 1,-0.2 5,-0.2 0.898 107.4 52.4 -58.7 -42.5 10.9 9.1 -1.4 53 53 A R H X S+ 0 0 35 -4,-2.2 4,-1.8 -5,-0.2 -1,-0.2 0.927 113.2 43.1 -60.2 -47.1 14.0 9.0 -3.7 54 54 A E H X S+ 0 0 89 -4,-1.4 4,-2.2 2,-0.2 5,-0.2 0.910 111.2 55.3 -65.9 -43.5 16.0 11.2 -1.4 55 55 A D H X S+ 0 0 88 -4,-3.0 4,-2.3 1,-0.2 -2,-0.2 0.928 111.5 43.4 -55.2 -49.0 14.8 9.5 1.8 56 56 A Q H X S+ 0 0 92 -4,-2.4 4,-2.6 1,-0.2 5,-0.2 0.849 108.6 60.2 -66.2 -34.9 16.0 6.1 0.5 57 57 A R H X S+ 0 0 23 -4,-1.8 4,-1.7 -5,-0.2 -1,-0.2 0.917 110.9 39.4 -59.2 -45.6 19.2 7.6 -0.7 58 58 A I H X S+ 0 0 5 -4,-2.2 4,-2.6 2,-0.2 5,-0.3 0.919 115.0 51.8 -70.9 -45.3 20.1 8.7 2.8 59 59 A S H X S+ 0 0 50 -4,-2.3 4,-1.8 -5,-0.2 -2,-0.2 0.872 112.4 47.1 -59.4 -38.4 18.8 5.6 4.5 60 60 A Q H X S+ 0 0 91 -4,-2.6 4,-2.9 2,-0.2 5,-0.3 0.873 110.5 52.2 -71.4 -38.4 20.9 3.5 2.0 61 61 A A H X S+ 0 0 0 -4,-1.7 4,-2.2 -5,-0.2 -2,-0.2 0.924 114.7 40.9 -63.7 -46.2 24.0 5.6 2.6 62 62 A K H X S+ 0 0 78 -4,-2.6 4,-0.9 2,-0.2 -1,-0.2 0.835 115.9 52.0 -71.2 -33.4 23.8 5.3 6.4 63 63 A L H X S+ 0 0 99 -4,-1.8 4,-0.8 -5,-0.3 3,-0.4 0.947 116.3 37.4 -67.9 -50.1 22.9 1.6 6.1 64 64 A L H >X S+ 0 0 19 -4,-2.9 3,-0.6 1,-0.2 4,-0.6 0.870 109.1 63.6 -69.7 -37.7 25.8 0.7 3.8 65 65 A L H 3< S+ 0 0 21 -4,-2.2 3,-0.3 -5,-0.3 -1,-0.2 0.800 100.8 54.2 -56.7 -29.0 28.2 3.1 5.6 66 66 A S H 3< S+ 0 0 101 -4,-0.9 -1,-0.3 -3,-0.4 -2,-0.2 0.839 114.9 37.7 -74.5 -34.4 27.7 0.9 8.7 67 67 A T H << S+ 0 0 111 -4,-0.8 2,-0.3 -3,-0.6 -1,-0.2 0.282 118.3 61.7 -98.7 8.5 28.7 -2.3 6.8 68 68 A T < - 0 0 40 -4,-0.6 7,-0.0 -3,-0.3 0, 0.0 -0.918 58.0-158.5-133.3 159.4 31.4 -0.5 4.9 69 69 A R + 0 0 212 -2,-0.3 -4,-0.1 2,-0.0 -3,-0.1 0.108 50.9 130.0-122.1 18.3 34.6 1.4 5.6 70 70 A M - 0 0 60 1,-0.1 -2,-0.1 2,-0.1 0, 0.0 -0.345 62.6 -98.2 -73.7 155.4 34.8 3.5 2.4 71 71 A P > - 0 0 73 0, 0.0 4,-2.8 0, 0.0 3,-0.3 -0.214 33.0-104.8 -69.8 162.4 35.3 7.3 2.5 72 72 A I H > S+ 0 0 44 1,-0.2 4,-1.9 2,-0.2 5,-0.1 0.814 121.5 58.7 -57.3 -30.8 32.5 9.8 2.2 73 73 A A H > S+ 0 0 42 2,-0.2 4,-1.0 1,-0.2 -1,-0.2 0.931 111.2 38.4 -65.0 -47.2 33.7 10.4 -1.4 74 74 A T H >> S+ 0 0 50 -3,-0.3 4,-1.0 1,-0.2 3,-0.5 0.916 113.7 55.2 -70.4 -44.6 33.2 6.8 -2.4 75 75 A V H >X S+ 0 0 0 -4,-2.8 4,-0.8 1,-0.2 3,-0.7 0.881 101.8 59.3 -56.1 -40.6 30.0 6.3 -0.4 76 76 A G H ><>S+ 0 0 0 -4,-1.9 5,-2.9 1,-0.3 3,-1.1 0.883 97.4 59.1 -56.7 -40.8 28.5 9.3 -2.2 77 77 A R H X<5S+ 0 0 175 -4,-1.0 3,-1.7 -3,-0.5 -1,-0.3 0.841 97.4 61.5 -57.7 -34.4 28.9 7.6 -5.6 78 78 A N H <<5S+ 0 0 81 -4,-1.0 -1,-0.3 -3,-0.7 -2,-0.2 0.825 107.9 43.3 -62.1 -31.8 26.7 4.8 -4.3 79 79 A V T <<5S- 0 0 3 -3,-1.1 -1,-0.3 -4,-0.8 -2,-0.2 0.143 124.4-103.2 -99.5 18.0 23.9 7.2 -3.9 80 80 A G T < 5S+ 0 0 15 -3,-1.7 2,-0.6 1,-0.3 -3,-0.2 0.542 77.5 143.8 73.3 5.2 24.6 8.9 -7.2 81 81 A F < + 0 0 5 -5,-2.9 -1,-0.3 -6,-0.2 -2,-0.2 -0.697 27.6 178.8 -83.2 116.9 26.2 11.7 -5.3 82 82 A D + 0 0 132 -2,-0.6 2,-0.6 -3,-0.1 -1,-0.2 0.790 67.3 69.4 -85.3 -31.5 29.2 13.1 -7.2 83 83 A D > - 0 0 108 1,-0.2 4,-1.5 -7,-0.1 -1,-0.1 -0.808 65.5-160.1 -94.2 119.2 30.0 15.8 -4.6 84 84 A Q H > S+ 0 0 107 -2,-0.6 4,-1.6 1,-0.2 -1,-0.2 0.890 96.3 48.3 -62.2 -40.8 31.3 14.5 -1.3 85 85 A L H > S+ 0 0 106 1,-0.2 4,-2.8 2,-0.2 -1,-0.2 0.834 103.9 61.8 -68.9 -33.0 30.3 17.7 0.5 86 86 A Y H > S+ 0 0 100 1,-0.2 4,-2.2 2,-0.2 5,-0.2 0.895 105.2 46.8 -60.0 -41.7 26.8 17.6 -1.1 87 87 A F H X S+ 0 0 0 -4,-1.5 4,-3.1 2,-0.2 5,-0.3 0.924 114.5 45.7 -66.8 -45.7 26.1 14.3 0.6 88 88 A S H X S+ 0 0 23 -4,-1.6 4,-2.2 2,-0.2 -2,-0.2 0.873 112.1 52.8 -65.5 -38.0 27.4 15.5 4.0 89 89 A R H X S+ 0 0 173 -4,-2.8 4,-1.2 2,-0.2 -2,-0.2 0.947 117.7 35.3 -63.0 -50.5 25.5 18.8 3.6 90 90 A V H X S+ 0 0 30 -4,-2.2 4,-1.8 2,-0.2 3,-0.2 0.927 119.5 49.4 -69.9 -46.5 22.1 17.1 2.9 91 91 A F H X S+ 0 0 2 -4,-3.1 4,-1.8 -5,-0.2 5,-0.4 0.849 104.0 62.4 -61.4 -34.9 22.7 14.2 5.3 92 92 A K H X S+ 0 0 100 -4,-2.2 4,-1.6 -5,-0.3 -1,-0.2 0.930 110.9 36.6 -56.5 -48.7 23.7 16.7 8.0 93 93 A K H < S+ 0 0 153 -4,-1.2 -1,-0.2 -3,-0.2 -2,-0.2 0.759 106.8 70.8 -75.8 -25.6 20.3 18.2 8.0 94 94 A C H < S+ 0 0 70 -4,-1.8 -2,-0.2 1,-0.2 -1,-0.2 0.933 124.0 8.5 -55.8 -49.9 18.6 14.9 7.4 95 95 A T H < S- 0 0 80 -4,-1.8 -1,-0.2 2,-0.4 -2,-0.2 0.501 107.6-110.8-108.7 -10.5 19.5 13.7 10.9 96 96 A G S < S+ 0 0 60 -4,-1.6 2,-0.3 -5,-0.4 -3,-0.2 0.341 92.1 77.6 95.9 -6.1 20.7 17.0 12.2 97 97 A A S S- 0 0 31 -6,-0.4 -2,-0.4 -5,-0.1 -1,-0.2 -0.981 83.6-103.7-137.6 149.0 24.3 15.8 12.5 98 98 A S > - 0 0 29 -2,-0.3 4,-1.9 1,-0.1 5,-0.2 -0.160 30.3-116.7 -65.3 162.3 27.1 15.3 10.0 99 99 A P H > S+ 0 0 10 0, 0.0 4,-2.4 0, 0.0 5,-0.2 0.826 113.8 57.3 -69.8 -33.0 28.1 11.8 8.8 100 100 A S H > S+ 0 0 85 2,-0.2 4,-1.4 1,-0.2 5,-0.1 0.842 109.2 46.0 -67.4 -34.0 31.6 12.1 10.3 101 101 A E H >>S+ 0 0 88 2,-0.2 4,-1.5 3,-0.1 5,-1.2 0.928 113.9 46.4 -74.3 -47.5 30.1 12.7 13.7 102 102 A F H <5S+ 0 0 127 -4,-1.9 3,-0.3 1,-0.2 -2,-0.2 0.927 114.7 47.2 -60.7 -47.1 27.5 9.9 13.6 103 103 A R H <5S+ 0 0 149 -4,-2.4 -1,-0.2 1,-0.2 -2,-0.2 0.870 111.3 51.9 -63.0 -37.7 30.1 7.4 12.3 104 104 A A H <5S- 0 0 77 -4,-1.4 -1,-0.2 -5,-0.2 -2,-0.2 0.773 103.9-134.4 -70.2 -26.4 32.5 8.5 15.0 105 105 A G T <5 + 0 0 61 -4,-1.5 2,-0.3 1,-0.3 -3,-0.2 0.610 48.8 155.7 81.3 11.9 29.9 8.0 17.7 106 106 A C < 0 0 85 -5,-1.2 -1,-0.3 1,-0.1 -2,-0.1 -0.539 360.0 360.0 -75.7 135.2 30.7 11.4 19.3 107 107 A E 0 0 226 -2,-0.3 -1,-0.1 -3,-0.1 -2,-0.1 0.989 360.0 360.0 -71.8 360.0 27.9 13.0 21.3