==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER IMMUNE SYSTEM 04-NOV-08 2KAC . COMPND 2 MOLECULE: PROTEIN L; . SOURCE 2 ORGANISM_SCIENTIFIC: PEPTOSTREPTOCOCCUS MAGNUS; . AUTHOR B.LOPEZ-MENDEZ,X.TADEO,M.PONS,O.MILLET . 64 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4792.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 46 71.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 6 9.4 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 17 26.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 7.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 9.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 12 18.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 251 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 18.6 -21.6 2.8 -2.6 2 2 A E - 0 0 169 1,-0.1 22,-0.0 23,-0.0 0, 0.0 -0.237 360.0-107.0 -62.8 148.1 -20.5 1.9 1.0 3 3 A E - 0 0 135 22,-0.1 2,-0.2 1,-0.1 22,-0.2 -0.174 34.8-152.4 -69.6 168.3 -16.9 2.5 2.1 4 4 A V E -A 24 0A 35 20,-2.7 20,-1.8 2,-0.0 2,-0.4 -0.817 12.5-121.4-137.0 174.6 -14.3 -0.3 2.5 5 5 A T E -A 23 0A 87 -2,-0.2 2,-0.4 18,-0.2 18,-0.2 -0.986 23.9-165.5-123.2 131.8 -11.1 -1.2 4.5 6 6 A I E -A 22 0A 0 16,-2.3 16,-1.9 -2,-0.4 2,-0.6 -0.968 13.1-141.1-126.1 131.8 -7.8 -2.1 2.6 7 7 A K E -Ab 21 57A 73 49,-2.9 51,-2.9 -2,-0.4 2,-0.6 -0.868 13.8-165.8 -92.5 120.5 -4.8 -3.7 4.2 8 8 A A E -Ab 20 58A 1 12,-2.8 12,-2.6 -2,-0.6 2,-0.4 -0.955 3.5-164.9-112.1 110.3 -1.5 -2.3 2.9 9 9 A N E -Ab 19 59A 42 49,-2.8 51,-2.9 -2,-0.6 2,-0.4 -0.857 7.5-165.2 -94.5 132.2 1.5 -4.5 3.9 10 10 A L E +Ab 18 60A 1 8,-2.5 8,-2.9 -2,-0.4 2,-0.4 -0.987 10.6 177.2-127.1 126.6 4.9 -2.8 3.5 11 11 A I E -Ab 17 61A 61 49,-1.4 51,-2.4 -2,-0.4 2,-0.3 -0.999 8.3-164.9-129.9 131.7 8.3 -4.6 3.5 12 12 A F E >> -A 16 0A 24 4,-2.0 3,-1.0 -2,-0.4 4,-0.9 -0.879 30.9-125.8-111.9 149.5 11.8 -2.9 2.9 13 13 A A T 34 S+ 0 0 78 -2,-0.3 -1,-0.1 1,-0.3 4,-0.1 0.676 98.5 90.0 -67.4 -12.9 15.0 -4.9 2.1 14 14 A N T 34 S- 0 0 128 2,-0.2 -1,-0.3 1,-0.1 3,-0.1 0.331 113.6-102.0 -64.8 3.2 16.4 -3.0 5.1 15 15 A G T <4 S+ 0 0 76 -3,-1.0 2,-0.3 1,-0.3 -2,-0.2 0.910 90.0 105.9 75.3 36.0 15.2 -5.9 7.4 16 16 A S E < -A 12 0A 73 -4,-0.9 -4,-2.0 2,-0.0 2,-0.3 -0.980 51.6-155.5-149.3 142.7 12.1 -4.0 8.7 17 17 A T E -A 11 0A 104 -2,-0.3 2,-0.3 -6,-0.2 -6,-0.2 -0.814 10.6-178.8-116.9 158.3 8.4 -4.4 8.0 18 18 A Q E -A 10 0A 62 -8,-2.9 -8,-2.5 -2,-0.3 2,-0.3 -0.923 8.9-154.5-149.6 162.9 5.6 -1.8 8.3 19 19 A T E -A 9 0A 83 -2,-0.3 2,-0.3 -10,-0.2 -10,-0.2 -0.989 4.1-167.4-146.2 151.8 1.8 -1.9 7.8 20 20 A A E -A 8 0A 19 -12,-2.6 -12,-2.8 -2,-0.3 2,-0.4 -0.966 6.9-157.1-138.6 148.5 -0.9 0.7 7.0 21 21 A E E -A 7 0A 132 -2,-0.3 2,-0.3 -14,-0.2 -14,-0.2 -0.985 14.0-168.0-133.4 114.1 -4.7 0.4 7.1 22 22 A F E -A 6 0A 43 -16,-1.9 -16,-2.3 -2,-0.4 2,-0.4 -0.843 5.9-162.5-107.4 149.1 -6.7 2.8 4.9 23 23 A E E +A 5 0A 164 -2,-0.3 2,-0.3 -18,-0.2 -18,-0.2 -0.987 45.8 71.2-131.0 133.5 -10.5 3.5 5.1 24 24 A G E S-A 4 0A 12 -20,-1.8 -20,-2.7 -2,-0.4 -2,-0.0 -0.983 83.2 -19.3 155.6-157.9 -12.5 5.1 2.2 25 25 A T S > S- 0 0 70 -2,-0.3 4,-2.3 -22,-0.2 5,-0.2 -0.265 70.8 -97.2 -71.9 170.5 -13.8 4.4 -1.3 26 26 A F T 4 S+ 0 0 131 1,-0.2 -1,-0.1 2,-0.2 -23,-0.0 0.673 128.9 33.1 -62.1 -17.3 -12.2 1.6 -3.5 27 27 A E T > S+ 0 0 148 3,-0.1 4,-2.9 2,-0.1 5,-0.3 0.719 114.4 55.6-111.8 -27.2 -10.1 4.3 -5.1 28 28 A E H > S+ 0 0 122 1,-0.2 4,-0.7 2,-0.2 -2,-0.2 0.797 112.1 44.9 -79.9 -21.8 -9.6 6.7 -2.2 29 29 A A H < S+ 0 0 0 -4,-2.3 4,-0.3 2,-0.1 -1,-0.2 0.572 118.6 44.8 -94.2 -8.4 -8.1 3.9 -0.1 30 30 A T H > S+ 0 0 31 -3,-0.3 4,-2.3 -5,-0.2 -2,-0.2 0.836 112.2 45.5-102.1 -42.6 -6.0 2.7 -3.0 31 31 A S H X S+ 0 0 82 -4,-2.9 4,-2.0 2,-0.2 -3,-0.2 0.857 113.5 51.7 -75.6 -24.5 -4.5 6.0 -4.4 32 32 A E H X S+ 0 0 116 -4,-0.7 4,-2.0 -5,-0.3 -1,-0.2 0.917 111.2 48.4 -73.2 -40.2 -3.6 7.2 -0.9 33 33 A A H > S+ 0 0 2 -4,-0.3 4,-1.5 2,-0.2 -2,-0.2 0.897 112.6 46.7 -66.4 -42.0 -1.8 3.9 -0.3 34 34 A Y H X S+ 0 0 62 -4,-2.3 4,-2.0 1,-0.2 -1,-0.2 0.872 111.8 51.7 -72.2 -29.6 0.1 4.1 -3.6 35 35 A A H X S+ 0 0 49 -4,-2.0 4,-2.2 2,-0.2 -2,-0.2 0.870 104.7 56.8 -72.3 -32.5 1.0 7.7 -2.8 36 36 A Y H < S+ 0 0 91 -4,-2.0 -1,-0.2 1,-0.2 -2,-0.2 0.898 111.1 43.3 -63.5 -38.4 2.3 6.6 0.6 37 37 A A H >X S+ 0 0 0 -4,-1.5 4,-1.7 1,-0.2 3,-1.6 0.860 109.1 58.1 -73.1 -35.0 4.6 4.2 -1.2 38 38 A D H 3X S+ 0 0 108 -4,-2.0 4,-0.9 1,-0.3 -2,-0.2 0.902 103.5 52.5 -62.0 -37.0 5.5 6.9 -3.8 39 39 A T H 3< S+ 0 0 100 -4,-2.2 -1,-0.3 1,-0.2 -2,-0.2 0.265 112.4 47.4 -83.5 11.1 6.7 9.2 -0.9 40 40 A L H X4 S+ 0 0 30 -3,-1.6 3,-1.4 -5,-0.1 -2,-0.2 0.599 95.5 69.1-120.8 -28.0 9.0 6.3 0.3 41 41 A E H >< S+ 0 0 67 -4,-1.7 3,-1.8 1,-0.3 -2,-0.2 0.895 93.2 60.7 -59.5 -40.9 10.6 5.3 -3.1 42 42 A E T 3< S+ 0 0 165 -4,-0.9 -1,-0.3 1,-0.3 -3,-0.1 0.646 113.6 36.8 -61.9 -16.1 12.5 8.6 -3.1 43 43 A D T < S+ 0 0 140 -3,-1.4 -1,-0.3 2,-0.1 -2,-0.2 0.200 134.7 19.1-119.2 7.3 14.2 7.4 0.2 44 44 A N S < S- 0 0 52 -3,-1.8 2,-0.3 -4,-0.2 -3,-0.2 0.383 99.3 -96.8-136.4 -83.9 14.4 3.6 -0.7 45 45 A G - 0 0 11 -5,-0.1 -2,-0.1 19,-0.0 -1,-0.1 -0.918 59.0 -32.3 169.7-175.4 14.3 2.4 -4.4 46 46 A E - 0 0 138 -2,-0.3 17,-2.8 16,-0.1 18,-0.8 -0.077 59.9-157.9 -58.0 161.9 11.7 1.0 -6.8 47 47 A W E -C 62 0A 75 15,-0.3 2,-0.3 16,-0.1 15,-0.2 -0.943 12.1-147.8-142.9 165.4 8.9 -1.2 -5.6 48 48 A T E -C 61 0A 88 13,-2.6 13,-2.4 -2,-0.3 2,-0.4 -0.861 11.3-150.8-130.3 157.7 6.4 -3.9 -6.6 49 49 A V E -C 60 0A 44 -2,-0.3 2,-0.6 11,-0.2 11,-0.2 -0.997 5.1-158.4-140.9 136.6 2.8 -4.7 -5.5 50 50 A D E -C 59 0A 118 9,-2.7 9,-2.6 -2,-0.4 2,-0.3 -0.959 17.4-146.4-115.0 110.9 0.8 -7.9 -5.3 51 51 A V E +C 58 0A 93 -2,-0.6 2,-0.3 7,-0.2 7,-0.2 -0.671 30.9 162.3 -80.3 132.8 -3.0 -7.4 -5.2 52 52 A A E > > +C 57 0A 32 5,-2.8 3,-1.8 -2,-0.3 5,-1.7 -0.837 41.5 36.1-142.2 176.2 -4.8 -10.0 -3.1 53 53 A D G > 5S- 0 0 114 1,-0.3 3,-2.2 -2,-0.3 -1,-0.2 0.858 129.0 -51.0 36.3 68.3 -8.2 -10.7 -1.4 54 54 A E G 3 5S- 0 0 171 1,-0.3 -1,-0.3 2,-0.1 -3,-0.0 0.626 107.0 -56.1 50.9 24.6 -10.5 -8.9 -3.9 55 55 A G G < 5S+ 0 0 13 -3,-1.8 -1,-0.3 2,-0.3 -2,-0.2 0.143 120.6 106.3 97.5 -15.8 -8.3 -5.8 -3.8 56 56 A Y T < 5S+ 0 0 102 -3,-2.2 -49,-2.9 -50,-0.1 2,-0.4 0.440 75.6 57.2 -73.7 -4.4 -8.7 -5.4 0.0 57 57 A T E < -bC 7 52A 25 -5,-1.7 -5,-2.8 -51,-0.2 2,-0.5 -0.992 62.9-176.8-132.8 121.9 -5.0 -6.6 0.5 58 58 A L E -bC 8 51A 4 -51,-2.9 -49,-2.8 -2,-0.4 2,-0.8 -0.981 9.1-162.4-121.6 110.4 -2.1 -4.8 -1.1 59 59 A N E -bC 9 50A 55 -9,-2.6 -9,-2.7 -2,-0.5 2,-0.5 -0.893 12.1-170.8 -97.3 106.2 1.2 -6.5 -0.5 60 60 A I E -bC 10 49A 2 -51,-2.9 -49,-1.4 -2,-0.8 2,-0.4 -0.899 6.2-178.9-103.7 130.9 3.9 -3.9 -1.3 61 61 A E E -bC 11 48A 125 -13,-2.4 -13,-2.6 -2,-0.5 2,-0.3 -0.997 19.0-140.4-133.0 120.9 7.6 -5.0 -1.5 62 62 A F E - C 0 47A 8 -51,-2.4 -15,-0.3 -2,-0.4 -16,-0.1 -0.671 2.0-151.0 -81.5 140.6 10.5 -2.6 -2.2 63 63 A A 0 0 73 -17,-2.8 -16,-0.1 -2,-0.3 -1,-0.1 0.940 360.0 360.0 -74.0 -48.7 13.3 -3.9 -4.4 64 64 A G 0 0 82 -18,-0.8 -17,-0.1 -23,-0.0 -2,-0.0 0.526 360.0 360.0 87.7 360.0 16.0 -1.7 -2.8