==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER METAL BINDING PROTEIN 28-NOV-08 2KBI . COMPND 2 MOLECULE: SODIUM CHANNEL PROTEIN TYPE 5 SUBUNIT ALPHA; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR B.CHAGOT,F.POTET,J.R.BALSER,W.J.CHAZIN . 97 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7174.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 53 54.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 4 4.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 4.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 9.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 32 33.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -4 A G 0 0 126 0, 0.0 2,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 160.7 33.4 21.5 -5.9 2 -3 A P - 0 0 91 0, 0.0 3,-0.3 0, 0.0 2,-0.1 -0.214 360.0-117.9 -72.6 166.0 33.9 23.5 -9.1 3 -2 A G S S+ 0 0 54 1,-0.2 4,-0.3 4,-0.1 0, 0.0 -0.255 84.2 50.2 -90.9-178.2 33.7 27.4 -9.6 4 -1 A S S > S- 0 0 116 1,-0.1 2,-1.9 2,-0.1 3,-0.8 0.705 95.9-114.9 57.4 28.3 31.4 29.6 -11.7 5 1773 A E T 3 S+ 0 0 196 1,-0.3 -1,-0.1 -3,-0.3 3,-0.0 -0.229 112.6 44.7 47.0 -65.8 28.2 27.8 -10.4 6 1774 A N T 3 S- 0 0 120 -2,-1.9 2,-1.7 1,-0.1 -1,-0.3 0.795 82.3-177.4 -65.7 -31.7 27.0 26.2 -13.8 7 1775 A F < + 0 0 145 -3,-0.8 -1,-0.1 -4,-0.3 -4,-0.1 0.022 44.2 98.2 50.5 -19.9 30.7 25.2 -14.5 8 1776 A S - 0 0 67 -2,-1.7 -1,-0.1 2,-0.1 -2,-0.1 -0.193 58.6-155.2 -82.5 176.6 30.0 23.6 -18.0 9 1777 A V S S+ 0 0 152 -3,-0.1 2,-0.2 -2,-0.0 -1,-0.1 0.351 75.7 23.9-128.8 -6.9 30.4 25.1 -21.5 10 1778 A A - 0 0 82 0, 0.0 2,-0.2 0, 0.0 -2,-0.1 -0.738 65.8-128.2-144.3-175.3 27.7 22.9 -23.4 11 1779 A T - 0 0 125 -2,-0.2 -2,-0.0 -3,-0.1 0, 0.0 -0.870 6.1-150.0-137.7 175.0 24.5 20.8 -23.0 12 1780 A E + 0 0 192 -2,-0.2 2,-0.6 2,-0.1 -1,-0.0 0.382 56.7 118.6-127.4 -6.0 23.3 17.3 -24.0 13 1781 A E - 0 0 158 1,-0.1 -2,-0.0 2,-0.0 0, 0.0 -0.578 58.8-137.2 -71.6 110.0 19.5 17.9 -24.5 14 1782 A S - 0 0 87 -2,-0.6 2,-0.4 1,-0.0 -2,-0.1 -0.205 7.1-147.4 -65.5 159.3 18.5 17.1 -28.2 15 1783 A T + 0 0 140 0, 0.0 -1,-0.0 0, 0.0 -2,-0.0 -0.886 38.3 132.6-136.6 98.1 16.2 19.2 -30.4 16 1784 A E - 0 0 120 -2,-0.4 78,-0.0 2,-0.2 -2,-0.0 -0.963 57.6-121.6-142.0 158.6 14.1 17.3 -33.1 17 1785 A P S S+ 0 0 85 0, 0.0 2,-0.1 0, 0.0 77,-0.0 0.709 89.1 72.2 -78.4 -20.0 10.3 17.4 -34.2 18 1786 A L - 0 0 15 38,-0.0 2,-0.3 3,-0.0 -2,-0.2 -0.432 60.9-164.9 -88.9 166.5 9.7 13.6 -33.4 19 1787 A S >> - 0 0 63 -2,-0.1 4,-1.1 1,-0.0 3,-1.0 -0.889 41.2 -92.6-139.4 173.9 9.4 11.7 -30.1 20 1788 A E H 3> S+ 0 0 156 -2,-0.3 4,-2.4 1,-0.2 5,-0.2 0.834 120.6 63.8 -56.0 -34.7 9.5 8.0 -28.9 21 1789 A D H 3> S+ 0 0 112 1,-0.2 4,-2.3 2,-0.2 -1,-0.2 0.825 97.6 55.5 -62.7 -32.5 5.6 7.9 -29.2 22 1790 A D H <> S+ 0 0 19 -3,-1.0 4,-2.4 2,-0.2 -1,-0.2 0.936 111.2 42.7 -65.8 -47.3 5.9 8.4 -33.1 23 1791 A F H X S+ 0 0 55 -4,-1.1 4,-2.6 2,-0.2 5,-0.2 0.905 113.5 52.3 -66.2 -42.1 8.2 5.3 -33.5 24 1792 A D H X S+ 0 0 96 -4,-2.4 4,-2.2 2,-0.2 -2,-0.2 0.938 111.3 47.5 -57.6 -47.6 6.1 3.2 -31.0 25 1793 A M H X S+ 0 0 19 -4,-2.3 4,-2.3 2,-0.2 5,-0.3 0.922 110.6 52.8 -58.2 -46.1 3.0 4.1 -33.1 26 1794 A F H X S+ 0 0 0 -4,-2.4 4,-2.4 1,-0.2 -2,-0.2 0.945 112.7 42.8 -55.6 -52.8 4.9 3.2 -36.4 27 1795 A Y H X S+ 0 0 121 -4,-2.6 4,-1.4 2,-0.2 -1,-0.2 0.833 111.6 55.4 -66.6 -33.4 5.9 -0.3 -35.1 28 1796 A E H < S+ 0 0 126 -4,-2.2 4,-0.3 -5,-0.2 -1,-0.2 0.943 114.9 38.6 -61.2 -49.2 2.3 -0.9 -33.6 29 1797 A I H >< S+ 0 0 20 -4,-2.3 3,-1.5 1,-0.2 4,-0.4 0.858 107.8 65.6 -69.8 -35.1 0.7 -0.2 -37.0 30 1798 A W H >X S+ 0 0 11 -4,-2.4 4,-2.3 1,-0.3 3,-1.9 0.885 91.8 62.5 -54.7 -42.0 3.6 -2.1 -38.9 31 1799 A E T 3< S+ 0 0 138 -4,-1.4 -1,-0.3 1,-0.3 -2,-0.2 0.719 92.1 66.1 -59.8 -21.7 2.6 -5.4 -37.3 32 1800 A K T <4 S+ 0 0 144 -3,-1.5 -1,-0.3 -4,-0.3 -2,-0.2 0.714 115.6 27.1 -72.2 -21.4 -0.9 -5.2 -39.1 33 1801 A F T <4 S+ 0 0 63 -3,-1.9 -2,-0.2 -4,-0.4 -1,-0.2 0.619 132.8 35.7-115.1 -24.5 0.9 -5.6 -42.5 34 1802 A D >< + 0 0 7 -4,-2.3 3,-1.3 1,-0.1 5,-0.2 -0.629 61.5 153.1-127.6 70.4 4.0 -7.6 -41.4 35 1803 A P T 3 S+ 0 0 91 0, 0.0 -1,-0.1 0, 0.0 -4,-0.1 0.721 75.0 63.7 -70.8 -18.9 2.8 -9.9 -38.6 36 1804 A E T 3 S- 0 0 160 -3,-0.1 -5,-0.1 1,-0.0 -2,-0.0 0.510 104.5-133.6 -76.3 -8.0 5.7 -12.3 -39.6 37 1805 A A < + 0 0 63 -3,-1.3 -6,-0.1 -6,-0.1 -3,-0.0 0.707 58.3 143.2 55.1 27.8 8.1 -9.5 -38.5 38 1806 A T - 0 0 74 2,-0.2 -1,-0.1 1,-0.1 3,-0.1 0.635 64.9-123.5 -64.2 -16.2 10.2 -10.0 -41.8 39 1807 A Q S S+ 0 0 77 1,-0.2 43,-2.7 -5,-0.2 2,-0.3 0.532 78.7 97.6 71.4 17.0 10.8 -6.2 -42.0 40 1808 A F E +A 81 0A 82 41,-0.2 2,-0.3 42,-0.1 -1,-0.2 -0.968 44.0 176.7-129.2 150.4 9.2 -6.1 -45.5 41 1809 A I E -A 80 0A 8 39,-1.7 39,-2.4 -2,-0.3 2,-0.2 -0.949 33.9-103.9-137.1 161.7 5.8 -5.2 -47.1 42 1810 A E E >> -A 79 0A 100 -2,-0.3 3,-1.8 37,-0.2 4,-1.3 -0.545 23.3-122.9 -78.6 151.0 4.6 -5.1 -50.8 43 1811 A Y H 3> S+ 0 0 65 35,-2.5 4,-0.7 1,-0.3 36,-0.1 0.814 111.9 69.4 -60.7 -27.1 4.1 -1.7 -52.7 44 1812 A S H 34 S+ 0 0 92 34,-0.4 -1,-0.3 1,-0.2 4,-0.1 0.608 111.9 28.8 -65.0 -16.6 0.5 -3.0 -53.2 45 1813 A V H <> S+ 0 0 46 -3,-1.8 4,-2.6 2,-0.1 3,-0.2 0.432 95.6 90.1-123.0 -6.9 -0.1 -2.6 -49.4 46 1814 A L H X S+ 0 0 0 -4,-1.3 4,-2.7 1,-0.2 -2,-0.1 0.824 88.3 53.8 -56.3 -34.4 2.3 0.4 -48.7 47 1815 A S H X S+ 0 0 31 -4,-0.7 4,-1.2 2,-0.2 -1,-0.2 0.855 109.2 46.5 -72.7 -35.4 -0.6 2.8 -49.5 48 1816 A D H > S+ 0 0 67 -3,-0.2 4,-0.6 2,-0.2 -2,-0.2 0.918 114.2 48.5 -69.5 -43.3 -2.9 1.1 -46.9 49 1817 A F H >X S+ 0 0 0 -4,-2.6 3,-1.4 1,-0.2 4,-0.9 0.945 108.5 53.9 -58.7 -49.5 0.0 1.2 -44.4 50 1818 A A H 3< S+ 0 0 0 -4,-2.7 9,-2.3 1,-0.3 -1,-0.2 0.814 113.4 43.2 -54.2 -34.8 0.7 4.9 -45.2 51 1819 A D H 3< S+ 0 0 42 -4,-1.2 -1,-0.3 7,-0.2 -2,-0.2 0.489 104.8 64.9 -89.0 -6.8 -3.1 5.6 -44.4 52 1820 A A H << S+ 0 0 38 -3,-1.4 -2,-0.2 -4,-0.6 -1,-0.2 0.677 87.2 87.6 -91.2 -18.7 -3.2 3.4 -41.2 53 1821 A L S < S- 0 0 1 -4,-0.9 2,-0.2 -3,-0.2 -27,-0.1 -0.251 78.0-115.2 -72.6 161.5 -0.7 5.5 -39.2 54 1822 A S > - 0 0 72 -32,-0.1 4,-1.3 1,-0.1 3,-0.5 -0.592 56.7 -52.2 -83.8 158.1 -1.4 8.6 -37.0 55 1823 A E T 4 S+ 0 0 168 1,-0.3 -1,-0.1 2,-0.2 4,-0.1 -0.398 116.5 27.8 -61.2 149.4 -0.1 12.0 -37.9 56 1824 A P T 4 S+ 0 0 50 0, 0.0 -1,-0.3 0, 0.0 37,-0.1 -0.996 127.5 44.2 -83.7 -11.8 2.6 13.2 -38.6 57 1825 A L T 4 S+ 0 0 1 -3,-0.5 -2,-0.2 2,-0.1 -4,-0.1 0.744 96.9 102.1 -67.1 -21.4 3.9 9.8 -40.1 58 1826 A R < - 0 0 80 -4,-1.3 2,-0.4 -7,-0.1 -7,-0.2 -0.248 54.6-164.4 -52.3 141.0 0.4 9.4 -41.9 59 1827 A I - 0 0 15 -9,-2.3 4,-0.1 -12,-0.1 -6,-0.1 -0.924 30.7-131.4-124.8 98.7 -0.0 10.1 -45.6 60 1828 A A - 0 0 66 -2,-0.4 -9,-0.1 1,-0.1 -8,-0.0 -0.311 39.4 -73.4 -59.7 128.8 -3.8 10.4 -45.9 61 1829 A K S S+ 0 0 111 1,-0.1 -1,-0.1 2,-0.1 2,-0.1 -0.355 117.4 57.8 -60.1 139.8 -5.4 8.3 -48.7 62 1830 A P S S+ 0 0 117 0, 0.0 4,-0.1 0, 0.0 -1,-0.1 0.340 74.3 137.5 -71.1 129.3 -5.4 8.8 -51.7 63 1831 A N > + 0 0 5 -4,-0.1 4,-2.4 2,-0.1 5,-0.2 0.382 31.0 102.0-125.0 -2.8 -1.6 8.7 -51.2 64 1832 A Q H > S+ 0 0 127 1,-0.2 4,-2.4 2,-0.2 5,-0.2 0.873 84.7 51.7 -56.3 -39.3 -0.3 6.6 -54.3 65 1833 A I H > S+ 0 0 125 2,-0.2 4,-1.8 1,-0.2 -1,-0.2 0.910 109.8 49.8 -64.2 -42.8 0.9 9.9 -56.1 66 1834 A S H > S+ 0 0 47 2,-0.2 4,-1.1 1,-0.2 3,-0.3 0.960 111.8 47.7 -59.3 -51.3 2.8 10.9 -52.9 67 1835 A L H >< S+ 0 0 2 -4,-2.4 3,-0.6 1,-0.2 5,-0.4 0.888 110.4 52.2 -57.4 -42.7 4.5 7.4 -52.7 68 1836 A I H 3< S+ 0 0 112 -4,-2.4 -1,-0.2 1,-0.2 -2,-0.2 0.850 109.1 50.9 -61.9 -36.1 5.4 7.6 -56.5 69 1837 A N H 3< S+ 0 0 136 -4,-1.8 -1,-0.2 -3,-0.3 -2,-0.2 0.634 94.7 91.9 -80.2 -14.9 7.0 11.0 -55.9 70 1838 A M S << S- 0 0 33 -4,-1.1 19,-0.0 -3,-0.6 18,-0.0 -0.432 85.9-120.7 -71.4 156.5 9.2 9.7 -52.9 71 1839 A D + 0 0 102 -2,-0.1 -1,-0.1 17,-0.1 -3,-0.1 0.002 55.7 160.1 -83.4 24.5 12.7 8.3 -53.5 72 1840 A L - 0 0 28 -5,-0.4 13,-0.1 1,-0.1 2,-0.0 -0.261 28.6-144.5 -50.0 129.7 11.6 4.9 -52.0 73 1841 A P - 0 0 56 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 -0.174 4.2-136.3 -77.3-178.1 13.8 1.9 -52.9 74 1842 A M - 0 0 94 6,-0.1 6,-0.2 1,-0.1 0, 0.0 -0.984 8.0-160.1-136.0 149.5 12.7 -1.7 -53.6 75 1843 A V S S+ 0 0 84 4,-2.3 5,-0.1 -2,-0.3 -1,-0.1 0.596 96.0 10.6 -97.0 -15.5 14.4 -4.9 -52.3 76 1844 A S S S- 0 0 58 3,-0.7 4,-0.1 0, 0.0 -1,-0.0 0.367 111.1 -92.3-138.4 -11.0 12.9 -7.3 -55.0 77 1845 A G S S+ 0 0 59 2,-0.4 3,-0.1 0, 0.0 -3,-0.0 0.360 125.2 41.5 88.3 0.5 11.2 -5.0 -57.6 78 1846 A D S S+ 0 0 72 1,-0.2 -35,-2.5 -37,-0.1 -34,-0.4 0.439 104.1 63.0-147.9 -12.2 7.9 -5.3 -55.6 79 1847 A R E -A 42 0A 111 -37,-0.3 -4,-2.3 -36,-0.1 -3,-0.7 -0.806 58.0-153.8-118.6 160.1 8.7 -5.1 -51.8 80 1848 A I E -A 41 0A 0 -39,-2.4 -39,-1.7 -2,-0.3 2,-0.2 -0.965 22.0-111.3-135.5 144.3 10.2 -2.3 -49.5 81 1849 A H E > -A 40 0A 59 -2,-0.3 4,-2.1 -41,-0.2 3,-0.5 -0.571 22.9-123.2 -82.3 140.6 12.2 -2.5 -46.2 82 1850 A C H > S+ 0 0 3 -43,-2.7 4,-2.6 -2,-0.2 5,-0.1 0.859 108.6 45.9 -46.2 -55.9 10.7 -1.2 -42.9 83 1851 A M H > S+ 0 0 104 2,-0.2 4,-2.7 1,-0.2 -1,-0.2 0.835 112.2 51.7 -64.7 -33.5 13.5 1.4 -42.0 84 1852 A D H > S+ 0 0 65 -3,-0.5 4,-2.3 2,-0.2 -2,-0.2 0.879 111.0 47.6 -74.6 -35.6 13.6 2.8 -45.6 85 1853 A I H X S+ 0 0 0 -4,-2.1 4,-2.3 2,-0.2 -2,-0.2 0.957 113.0 49.7 -61.1 -53.1 9.7 3.3 -45.5 86 1854 A L H X S+ 0 0 4 -4,-2.6 4,-2.3 2,-0.2 5,-0.2 0.932 112.0 48.0 -51.5 -53.6 10.2 5.0 -42.0 87 1855 A F H X S+ 0 0 103 -4,-2.7 4,-2.3 1,-0.2 -1,-0.2 0.931 111.9 48.5 -53.4 -53.1 12.9 7.3 -43.3 88 1856 A A H X S+ 0 0 6 -4,-2.3 4,-0.5 1,-0.2 -1,-0.2 0.855 114.2 47.6 -59.0 -35.4 10.9 8.3 -46.5 89 1857 A F H < S+ 0 0 0 -4,-2.3 4,-0.5 1,-0.2 3,-0.3 0.850 115.2 43.4 -75.3 -36.2 7.9 9.1 -44.2 90 1858 A T H X S+ 0 0 10 -4,-2.3 4,-2.6 -5,-0.2 3,-0.4 0.775 94.9 79.7 -80.0 -26.1 9.9 11.1 -41.6 91 1859 A K H X>S+ 0 0 52 -4,-2.3 5,-1.5 1,-0.2 4,-0.7 0.822 92.0 52.7 -48.8 -39.3 11.8 13.1 -44.3 92 1860 A R H ><5S+ 0 0 101 -4,-0.5 3,-0.6 -3,-0.3 -1,-0.2 0.929 111.9 43.9 -57.4 -54.1 8.8 15.3 -44.8 93 1861 A V H 345S+ 0 0 44 -4,-0.5 -2,-0.2 -3,-0.4 -1,-0.2 0.874 113.0 51.6 -63.6 -42.7 8.6 16.1 -41.0 94 1862 A L H 3<5S- 0 0 70 -4,-2.6 -1,-0.2 2,-0.1 -2,-0.2 0.622 106.8-129.7 -70.5 -16.5 12.4 16.7 -40.8 95 1863 A G T <<5 + 0 0 52 -4,-0.7 2,-1.6 -3,-0.6 -3,-0.2 0.642 49.0 158.9 75.5 15.9 12.2 19.1 -43.8 96 1864 A E < 0 0 131 -5,-1.5 -1,-0.2 1,-0.2 -2,-0.1 -0.553 360.0 360.0 -79.5 82.7 15.1 17.3 -45.7 97 1865 A S 0 0 181 -2,-1.6 -1,-0.2 -3,-0.1 -5,-0.0 0.558 360.0 360.0-131.0 360.0 14.4 18.4 -49.3