==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL PROTEIN/CELL ADHESION 05-DEC-08 2KBS . COMPND 2 MOLECULE: HARMONIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR L.PAN,J.YAN,L.WU,M.ZHANG . 100 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6284.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 65 65.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 28 28.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 10.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 5.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 14 14.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 2 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 9 A K 0 0 205 0, 0.0 82,-1.1 0, 0.0 2,-0.4 0.000 360.0 360.0 360.0 102.8 -4.5 -3.4 -14.3 2 10 A E E -A 82 0A 171 80,-0.2 2,-0.3 1,-0.0 80,-0.3 -0.442 360.0-163.9 -62.7 115.2 -1.2 -1.7 -13.7 3 11 A K E -A 81 0A 61 78,-2.4 78,-1.2 -2,-0.4 2,-0.4 -0.783 8.6-140.0-105.2 147.8 -2.1 1.8 -12.4 4 12 A K E +A 80 0A 111 -2,-0.3 2,-0.4 76,-0.2 76,-0.2 -0.879 20.0 177.3-109.4 138.2 0.3 4.8 -12.3 5 13 A V E -A 79 0A 4 74,-1.6 74,-3.0 -2,-0.4 2,-0.6 -0.985 12.6-161.6-143.0 128.9 0.4 7.3 -9.4 6 14 A F E -A 78 0A 118 -2,-0.4 2,-0.5 72,-0.2 72,-0.2 -0.938 7.5-165.4-114.6 116.6 2.8 10.3 -8.9 7 15 A I E +A 77 0A 4 70,-2.0 70,-1.8 -2,-0.6 2,-0.4 -0.881 13.2 169.6-104.3 124.7 3.1 11.7 -5.4 8 16 A S - 0 0 54 -2,-0.5 2,-2.1 68,-0.3 3,-0.2 -0.983 34.7-134.7-138.2 125.0 4.7 15.2 -4.9 9 17 A L + 0 0 42 -2,-0.4 67,-0.1 1,-0.2 66,-0.1 -0.510 38.2 160.2 -77.6 78.1 4.8 17.3 -1.8 10 18 A V S S+ 0 0 131 -2,-2.1 -1,-0.2 3,-0.1 66,-0.0 0.815 72.0 20.4 -69.0 -30.7 3.9 20.6 -3.5 11 19 A G S S- 0 0 32 -3,-0.2 -2,-0.1 2,-0.2 3,-0.0 0.391 109.4 -75.7-105.5-120.9 2.8 22.0 -0.1 12 20 A S S S+ 0 0 112 2,-0.1 2,-0.3 0, 0.0 -3,-0.1 -0.173 91.0 91.4-143.8 43.1 3.7 21.0 3.4 13 21 A R S S- 0 0 161 1,-0.1 -2,-0.2 2,-0.0 26,-0.1 -0.982 71.2-107.5-140.3 151.3 1.7 17.8 4.0 14 22 A G - 0 0 36 -2,-0.3 25,-0.7 87,-0.1 -1,-0.1 0.225 44.8 -91.7 -60.8-168.1 2.2 14.1 3.6 15 23 A L - 0 0 11 2,-0.2 25,-3.9 23,-0.2 24,-0.5 0.889 49.6-126.5 -77.7 -41.0 0.5 12.0 0.9 16 24 A G + 0 0 2 1,-0.4 19,-2.9 23,-0.2 2,-0.3 0.659 68.8 104.9 102.6 20.4 -2.5 11.0 3.1 17 25 A C E -B 34 0A 3 17,-0.3 84,-1.8 23,-0.1 -1,-0.4 -0.927 51.9-146.6-132.6 158.6 -2.4 7.3 2.8 18 26 A S E - C 0 100A 11 15,-0.9 14,-2.7 14,-0.5 2,-0.3 -0.632 11.8-142.6-114.8 173.7 -1.3 4.3 4.9 19 27 A I E -BC 31 99A 1 80,-2.3 80,-2.6 12,-0.3 2,-0.3 -0.999 10.3-169.3-143.5 145.5 0.2 0.9 4.0 20 28 A S E -BC 30 98A 7 10,-0.8 10,-3.4 -2,-0.3 2,-0.3 -0.866 22.2-118.0-129.0 162.5 -0.1 -2.7 5.2 21 29 A S E -B 29 0A 29 76,-1.4 8,-0.2 -2,-0.3 42,-0.0 -0.803 25.8-133.7-104.4 143.8 1.7 -5.9 4.6 22 30 A G - 0 0 12 6,-1.2 75,-0.1 -2,-0.3 6,-0.1 -0.310 25.9 -93.8 -88.7 175.1 0.2 -9.0 3.0 23 31 A P - 0 0 44 0, 0.0 -1,-0.2 0, 0.0 5,-0.1 0.258 47.1 -88.0 -69.5-160.5 0.4 -12.7 4.1 24 32 A I S S+ 0 0 157 1,-0.2 -2,-0.0 2,-0.2 0, 0.0 0.749 122.4 63.0 -85.9 -27.0 2.9 -15.3 2.9 25 33 A Q S S+ 0 0 167 1,-0.3 -1,-0.2 64,-0.0 -3,-0.0 0.833 128.4 7.1 -66.4 -32.6 0.8 -16.4 -0.1 26 34 A K S S- 0 0 91 2,-0.1 -1,-0.3 60,-0.0 2,-0.2 -0.461 81.2-175.6-151.1 70.5 1.2 -12.8 -1.5 27 35 A P + 0 0 71 0, 0.0 2,-0.3 0, 0.0 -3,-0.1 -0.473 31.0 104.0 -72.3 137.5 3.6 -10.7 0.5 28 36 A G S S- 0 0 4 -2,-0.2 -6,-1.2 33,-0.1 2,-0.7 -0.984 71.3 -55.0 174.1-175.4 4.0 -7.0 -0.6 29 37 A I E -BD 21 51A 0 30,-0.9 22,-0.9 22,-0.5 -8,-0.2 -0.796 53.0-175.1 -92.9 116.6 3.1 -3.4 0.1 30 38 A F E -BD 20 50A 3 -10,-3.4 -10,-0.8 -2,-0.7 2,-0.4 -0.567 23.7-111.9-105.1 170.4 -0.6 -2.7 0.4 31 39 A I E -B 19 0A 0 18,-1.9 17,-1.4 -12,-0.3 -12,-0.3 -0.882 30.1-170.2-107.8 134.1 -2.6 0.5 0.7 32 40 A S E - 0 0 9 -14,-2.7 -14,-0.5 -2,-0.4 17,-0.1 -0.320 45.2 -39.5-106.1-169.7 -4.6 1.3 3.9 33 41 A H E - 0 0 143 -16,-0.2 -15,-0.9 13,-0.1 2,-0.3 -0.107 60.7-154.3 -51.6 149.2 -7.1 4.0 4.8 34 42 A V E -B 17 0A 29 -17,-0.2 -17,-0.3 11,-0.1 -18,-0.1 -0.923 10.7-120.1-130.2 155.4 -6.4 7.5 3.4 35 43 A K > - 0 0 98 -19,-2.9 3,-0.7 -2,-0.3 6,-0.6 -0.698 30.4-112.1 -95.9 147.1 -7.3 11.0 4.4 36 44 A P T 3 S+ 0 0 118 0, 0.0 3,-0.1 0, 0.0 -1,-0.1 -0.487 97.2 26.1 -77.5 144.6 -9.3 13.5 2.2 37 45 A G T 3 S+ 0 0 76 1,-0.3 -21,-0.0 -2,-0.2 -2,-0.0 0.086 98.0 110.1 93.4 -24.2 -7.7 16.5 0.7 38 46 A S S <> S- 0 0 19 -3,-0.7 4,-1.3 -22,-0.1 -1,-0.3 -0.060 87.8 -98.7 -74.1-179.1 -4.2 14.9 0.7 39 47 A L H > S+ 0 0 28 -25,-0.7 4,-2.1 -24,-0.5 5,-0.2 0.857 118.9 64.0 -70.5 -35.9 -2.3 13.7 -2.3 40 48 A S H >>S+ 0 0 0 -25,-3.9 5,-2.9 1,-0.2 4,-1.3 0.931 107.7 40.3 -52.8 -51.2 -3.4 10.1 -1.8 41 49 A A H 45S+ 0 0 44 -6,-0.6 -1,-0.2 -26,-0.4 -2,-0.2 0.838 111.7 58.3 -67.7 -33.7 -7.0 11.1 -2.5 42 50 A E H <5S+ 0 0 162 -4,-1.3 -1,-0.2 1,-0.2 -2,-0.2 0.812 110.9 41.9 -66.0 -31.1 -6.0 13.4 -5.3 43 51 A V H <5S- 0 0 45 -4,-2.1 -1,-0.2 -3,-0.3 -2,-0.2 0.681 123.1-103.7 -88.5 -20.8 -4.3 10.5 -7.1 44 52 A G T <5 + 0 0 38 -4,-1.3 -3,-0.2 -5,-0.2 2,-0.2 0.804 62.2 161.3 100.0 39.0 -7.1 8.1 -6.4 45 53 A L < + 0 0 9 -5,-2.9 2,-0.3 -6,-0.1 -1,-0.2 -0.519 2.5 140.7 -90.4 159.3 -5.6 6.0 -3.6 46 54 A E > - 0 0 117 -2,-0.2 3,-1.2 -13,-0.1 -15,-0.1 -0.965 52.6 -52.8 179.5 171.2 -7.6 3.8 -1.2 47 55 A I T 3 S+ 0 0 60 -2,-0.3 -15,-0.2 1,-0.2 3,-0.1 -0.244 113.0 36.9 -60.3 147.7 -7.6 0.5 0.7 48 56 A G T 3 S+ 0 0 3 -17,-1.4 38,-0.9 1,-0.4 39,-0.8 -0.200 86.9 115.1 103.7 -41.9 -7.1 -2.6 -1.4 49 57 A D < - 0 0 6 -3,-1.2 -18,-1.9 37,-0.3 -1,-0.4 0.023 52.6-148.6 -55.1 169.1 -4.6 -1.2 -3.8 50 58 A Q E -D 30 0A 19 32,-0.3 32,-2.3 -20,-0.2 2,-0.4 -0.875 9.4-134.3-150.8 113.0 -1.0 -2.5 -3.9 51 59 A I E +DE 29 81A 3 -22,-0.9 -22,-0.5 -2,-0.3 30,-0.3 -0.512 24.6 173.8 -69.2 122.0 2.1 -0.5 -4.7 52 60 A V E + 0 0 32 28,-3.1 7,-1.0 -2,-0.4 8,-0.4 0.263 65.7 21.5-111.5 8.5 4.3 -2.5 -7.2 53 61 A E E -FE 58 80A 52 27,-0.8 27,-1.5 5,-0.3 2,-0.2 -0.929 51.0-174.0-172.4 147.8 6.8 0.2 -7.8 54 62 A V E > S-FE 57 79A 1 3,-1.8 3,-1.6 -2,-0.3 25,-0.3 -0.757 80.5 -27.9-153.7 100.4 8.3 3.4 -6.3 55 63 A N T 3 S- 0 0 99 23,-3.3 24,-0.1 1,-0.3 3,-0.1 0.813 128.6 -45.8 63.5 30.4 10.8 5.6 -8.1 56 64 A G T 3 S+ 0 0 41 22,-0.3 2,-0.4 1,-0.3 -1,-0.3 -0.011 110.6 124.8 102.8 -29.6 12.0 2.5 -10.0 57 65 A V E < -F 54 0A 60 -3,-1.6 -3,-1.8 1,-0.1 2,-0.3 -0.525 64.3-126.1 -69.4 118.5 12.2 0.3 -6.9 58 66 A D E -F 53 0A 113 -2,-0.4 3,-0.4 -5,-0.2 -5,-0.3 -0.503 20.7-169.1 -68.7 123.3 10.1 -2.8 -7.5 59 67 A F + 0 0 0 -7,-1.0 -30,-0.9 -2,-0.3 -6,-0.2 0.117 57.5 109.5 -98.9 19.8 7.5 -3.3 -4.7 60 68 A S S S- 0 0 81 -8,-0.4 -1,-0.2 1,-0.2 -7,-0.1 0.897 106.3 -1.0 -61.0 -41.1 6.6 -6.8 -5.8 61 69 A N S S+ 0 0 134 -3,-0.4 -1,-0.2 -33,-0.1 2,-0.1 -0.012 95.8 146.5-139.1 28.5 8.4 -8.3 -2.8 62 70 A L - 0 0 20 1,-0.1 -3,-0.1 -35,-0.1 5,-0.0 -0.443 53.0-106.1 -71.3 141.0 9.7 -5.1 -1.1 63 71 A D > - 0 0 114 -2,-0.1 4,-1.9 1,-0.1 5,-0.1 -0.241 23.4-118.4 -64.7 154.7 9.8 -5.2 2.7 64 72 A H H > S+ 0 0 22 1,-0.2 4,-2.0 2,-0.2 3,-0.3 0.958 115.4 45.5 -58.3 -54.6 7.2 -3.2 4.7 65 73 A K H > S+ 0 0 152 1,-0.2 4,-2.9 2,-0.2 -1,-0.2 0.880 109.7 56.7 -57.2 -40.0 9.8 -1.0 6.4 66 74 A E H > S+ 0 0 94 1,-0.2 4,-2.5 2,-0.2 5,-0.3 0.890 105.8 50.9 -59.5 -40.8 11.6 -0.5 3.0 67 75 A A H X S+ 0 0 0 -4,-1.9 4,-1.9 -3,-0.3 -1,-0.2 0.931 114.6 41.9 -63.1 -47.3 8.3 0.8 1.5 68 76 A V H X S+ 0 0 21 -4,-2.0 4,-1.9 2,-0.2 -2,-0.2 0.859 114.2 54.0 -68.7 -36.1 7.8 3.3 4.3 69 77 A N H X S+ 0 0 98 -4,-2.9 4,-2.9 -5,-0.2 3,-0.2 0.978 111.7 40.9 -62.4 -59.0 11.5 4.3 4.4 70 78 A V H X S+ 0 0 34 -4,-2.5 4,-2.1 1,-0.2 -1,-0.2 0.888 116.9 50.6 -57.7 -40.5 11.8 5.1 0.7 71 79 A L H < S+ 0 0 21 -4,-1.9 -1,-0.2 -5,-0.3 -2,-0.2 0.829 114.2 44.8 -67.0 -32.0 8.4 6.9 0.8 72 80 A K H < S+ 0 0 110 -4,-1.9 -2,-0.2 -3,-0.2 -1,-0.2 0.830 110.3 55.2 -79.9 -34.8 9.6 8.8 3.8 73 81 A S H < S+ 0 0 103 -4,-2.9 2,-0.6 1,-0.2 -2,-0.2 0.976 111.1 42.0 -62.2 -58.4 13.0 9.6 2.3 74 82 A S < - 0 0 53 -4,-2.1 -1,-0.2 1,-0.2 3,-0.2 -0.836 64.3-165.5 -97.8 119.3 11.7 11.2 -0.9 75 83 A R S S+ 0 0 167 -2,-0.6 2,-0.6 1,-0.2 -1,-0.2 0.888 85.5 43.2 -67.2 -39.8 8.7 13.6 -0.5 76 84 A S S S+ 0 0 60 -68,-0.2 2,-0.3 -67,-0.1 -68,-0.3 -0.913 78.0 143.7-113.4 107.2 8.0 13.6 -4.2 77 85 A L E -A 7 0A 7 -70,-1.8 -70,-2.0 -2,-0.6 2,-0.5 -0.998 48.3-117.0-144.3 146.3 8.3 10.1 -5.8 78 86 A T E -A 6 0A 46 -2,-0.3 -23,-3.3 -72,-0.2 2,-0.5 -0.713 32.0-168.3 -85.2 123.0 6.5 8.2 -8.6 79 87 A I E -AE 5 54A 3 -74,-3.0 -74,-1.6 -2,-0.5 2,-0.7 -0.955 12.6-148.7-118.3 126.5 4.7 5.1 -7.3 80 88 A S E -AE 4 53A 14 -27,-1.5 -28,-3.1 -2,-0.5 -27,-0.8 -0.821 22.8-179.2 -95.5 112.4 3.3 2.4 -9.6 81 89 A I E -AE 3 51A 1 -78,-1.2 -78,-2.4 -2,-0.7 2,-0.5 -0.840 17.4-148.7-112.7 149.4 0.2 0.8 -8.0 82 90 A V E > -A 2 0A 24 -32,-2.3 3,-1.8 -2,-0.3 -32,-0.3 -0.955 21.5-124.6-122.1 115.5 -2.0 -2.0 -9.4 83 91 A A T 3 S+ 0 0 27 -82,-1.1 -34,-0.1 -2,-0.5 -35,-0.1 -0.253 95.7 15.6 -56.7 137.8 -5.7 -2.2 -8.5 84 92 A A T 3> S+ 0 0 44 1,-0.1 4,-1.7 4,-0.0 -1,-0.3 0.172 91.3 112.0 83.1 -17.5 -6.8 -5.5 -7.0 85 93 A A T <4 S+ 0 0 29 -3,-1.8 -36,-0.1 1,-0.2 -2,-0.1 0.745 97.0 19.7 -57.7 -22.2 -3.1 -6.4 -6.3 86 94 A G T >> S+ 0 0 0 -38,-0.9 4,-2.3 -4,-0.3 3,-0.8 0.651 111.0 72.9-117.1 -30.7 -4.1 -5.9 -2.6 87 95 A R H 3> S+ 0 0 138 -39,-0.8 4,-1.9 1,-0.3 -2,-0.2 0.843 90.9 63.4 -56.2 -34.5 -7.9 -6.2 -2.6 88 96 A E H 3< S+ 0 0 128 -4,-1.7 -1,-0.3 -40,-0.2 -3,-0.1 0.903 108.4 41.0 -56.8 -42.0 -7.5 -10.0 -3.2 89 97 A L H <4 S+ 0 0 17 -3,-0.8 -2,-0.2 -5,-0.2 -1,-0.2 0.933 108.0 59.2 -71.2 -48.6 -5.7 -10.3 0.2 90 98 A F H < S+ 0 0 86 -4,-2.3 2,-2.9 1,-0.2 -1,-0.2 0.824 84.4 87.7 -50.3 -34.1 -8.1 -7.9 2.0 91 99 A M < 0 0 155 -4,-1.9 -1,-0.2 1,-0.2 -4,-0.0 -0.384 360.0 360.0 -69.3 72.5 -10.9 -10.3 1.1 92 100 A T 0 0 169 -2,-2.9 -1,-0.2 0, 0.0 -2,-0.1 0.433 360.0 360.0 -96.8 360.0 -10.4 -12.5 4.1 93 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 94 111 B T 0 0 178 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 149.4 -4.4 -11.8 13.2 95 112 B P - 0 0 125 0, 0.0 2,-0.2 0, 0.0 3,-0.1 -0.122 360.0-108.9 -54.3 151.1 -4.6 -8.4 11.3 96 113 B L - 0 0 77 1,-0.1 -74,-0.1 -75,-0.0 0, 0.0 -0.487 39.3 -90.2 -83.3 154.3 -1.6 -7.4 9.3 97 114 B E - 0 0 154 -2,-0.2 -76,-1.4 -75,-0.1 2,-0.3 -0.251 44.8-161.8 -61.8 149.2 0.8 -4.5 10.3 98 115 B I E -C 20 0A 104 -78,-0.2 2,-0.3 -3,-0.1 -78,-0.2 -0.965 8.0-161.6-136.0 152.1 -0.1 -1.0 9.1 99 116 B T E -C 19 0A 43 -80,-2.6 -80,-2.3 -2,-0.3 2,-0.5 -0.975 16.2-130.7-134.9 148.1 1.7 2.3 8.7 100 117 B E E C 18 0A 132 -2,-0.3 -82,-0.2 -82,-0.2 -66,-0.1 -0.857 360.0 360.0-102.1 127.8 0.7 5.9 8.3 101 118 B L 0 0 20 -84,-1.8 -87,-0.1 -2,-0.5 -85,-0.1 -0.592 360.0 360.0-119.8 360.0 2.2 8.0 5.5