==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN 12-DEC-08 2KBZ . COMPND 2 MOLECULE: 15 PROTEIN (BACTERIOPHAGE SPP1 COMPLETE . SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS PHAGE SPP1; . AUTHOR M.GALLOPIN,B.GILQUIN,S.ZINN-JUSTIN . 99 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7044.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 57 57.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 5.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 9.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 37 37.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 4 4.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 39 A Q 0 0 193 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -8.9 -9.8 -35.6 240.9 2 40 A R > + 0 0 192 1,-0.0 3,-0.7 0, 0.0 4,-0.3 -0.033 360.0 95.6 87.6 -19.7 -11.2 -34.0 237.7 3 41 A V T >> S+ 0 0 98 1,-0.2 3,-1.0 2,-0.2 4,-0.5 0.862 79.6 56.1 -63.1 -39.0 -8.2 -35.5 235.7 4 42 A K H 3> S+ 0 0 126 1,-0.2 4,-3.0 2,-0.2 -1,-0.2 0.681 89.9 75.9 -63.4 -27.5 -10.5 -38.5 234.7 5 43 A R H <4 S+ 0 0 164 -3,-0.7 -1,-0.2 1,-0.2 -2,-0.2 0.692 93.2 52.4 -62.3 -24.4 -13.1 -36.0 233.2 6 44 A L H <4 S+ 0 0 108 -3,-1.0 -1,-0.2 -4,-0.3 -2,-0.2 0.828 122.2 27.6 -77.5 -41.0 -10.8 -35.6 230.1 7 45 A L H <>S+ 0 0 90 -4,-0.5 5,-2.7 -3,-0.2 4,-0.3 0.654 107.7 71.8 -99.2 -18.8 -10.4 -39.3 229.3 8 46 A S T <5S+ 0 0 56 -4,-3.0 -3,-0.1 3,-0.2 -1,-0.1 0.521 108.0 36.7 -71.8 -10.4 -13.8 -40.6 230.8 9 47 A I T >>S+ 0 0 45 -5,-0.2 4,-3.0 -4,-0.1 2,-2.1 0.435 125.6 6.6-105.9-119.8 -15.6 -38.9 227.8 10 48 A T T 45S+ 0 0 3 3,-0.2 9,-0.1 2,-0.2 -2,-0.1 -0.344 132.4 45.7 -78.2 58.1 -14.5 -38.6 224.2 11 49 A N T >5S+ 0 0 46 -2,-2.1 4,-2.2 -4,-0.3 5,-0.2 -0.058 120.0 32.1-156.6 -80.4 -11.4 -40.8 224.7 12 50 A D T 4< + 0 0 80 -5,-1.1 4,-2.3 1,-0.1 5,-0.3 -0.014 66.9 134.3-135.3 38.1 -15.5 -42.0 221.7 15 53 A D H X S+ 0 0 86 -4,-2.2 4,-0.8 1,-0.2 -3,-0.1 0.860 90.8 46.5 -53.5 -36.6 -11.6 -41.6 220.9 16 54 A E H > S+ 0 0 142 -5,-0.2 4,-0.7 3,-0.1 -1,-0.2 0.807 114.4 47.4 -72.5 -35.2 -12.6 -42.9 217.3 17 55 A Y H > S+ 0 0 81 -3,-0.3 4,-0.9 2,-0.1 -2,-0.2 0.955 116.7 36.0 -77.3 -49.2 -15.6 -40.4 217.1 18 56 A L H >X S+ 0 0 0 -4,-2.3 4,-1.0 1,-0.2 3,-0.8 0.985 115.5 53.6 -69.4 -51.3 -14.2 -37.0 218.2 19 57 A T H 3< S+ 0 0 24 -4,-0.8 -1,-0.2 -5,-0.3 -2,-0.1 0.683 104.5 55.3 -49.9 -32.5 -10.7 -37.4 216.6 20 58 A E H 3X S+ 0 0 69 -4,-0.7 4,-1.4 2,-0.2 -1,-0.2 0.826 98.2 62.7 -71.9 -35.5 -12.1 -38.3 213.1 21 59 A M H >S+ 0 0 7 0, 0.0 4,-1.7 0, 0.0 5,-0.6 0.806 105.4 59.1 -55.5 -18.9 -8.9 -34.7 210.1 24 62 A L H X5S+ 0 0 98 -4,-1.4 4,-1.1 3,-0.2 5,-0.3 0.955 116.8 31.5 -63.5 -41.3 -12.0 -33.6 208.1 25 63 A L H X5S+ 0 0 5 -4,-1.2 4,-2.3 -3,-0.4 5,-0.3 0.954 127.5 40.7 -70.9 -53.0 -11.0 -30.0 209.4 26 64 A V H X5S+ 0 0 2 -4,-3.1 4,-1.1 3,-0.2 -2,-0.1 0.861 123.1 39.7 -63.4 -44.3 -7.0 -30.6 209.5 27 65 A E H X5S+ 0 0 35 -4,-1.7 4,-1.1 -5,-0.3 -3,-0.2 0.904 121.8 41.3 -78.7 -41.0 -6.9 -32.6 206.2 28 66 A F H <X>S+ 0 0 0 -4,-1.1 3,-2.2 -5,-0.3 4,-1.0 0.669 88.5 82.7 -75.8 -21.0 -4.6 -28.1 205.2 31 69 A D T 3<5S+ 0 0 98 -4,-1.1 -1,-0.2 1,-0.3 -2,-0.2 0.717 84.7 67.2 -52.9 -22.6 -5.2 -29.5 201.5 32 70 A E T 345S+ 0 0 95 -3,-0.5 -1,-0.3 -4,-0.3 -2,-0.2 0.747 101.4 42.4 -56.6 -46.1 -4.7 -25.7 200.8 33 71 A C T <45S- 0 0 0 -3,-2.2 -2,-0.2 -4,-0.1 -1,-0.2 0.650 99.3-137.1 -85.4 -25.7 -1.0 -25.9 201.8 34 72 A H T <5 + 0 0 127 -4,-1.0 -3,-0.1 1,-0.2 -2,-0.1 0.531 50.1 151.3 74.4 14.0 -0.3 -29.3 200.0 35 73 A N < - 0 0 2 -5,-0.6 2,-2.4 60,-0.1 -1,-0.2 -0.253 60.9 -85.6 -77.9 161.1 1.7 -30.6 203.0 36 74 A P S S+ 0 0 88 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 -0.232 73.2 132.6 -81.8 64.3 2.0 -34.4 204.0 37 75 A F + 0 0 7 -2,-2.4 8,-2.7 -10,-0.1 2,-0.3 0.156 64.2 83.1 -83.2 14.9 -1.2 -34.9 206.2 38 76 A I B S-A 44 0A 91 6,-0.3 6,-0.2 -3,-0.1 2,-0.2 -0.835 74.6-139.8-117.2 151.5 -1.5 -38.0 204.0 39 77 A D > - 0 0 95 4,-2.9 3,-2.6 -2,-0.3 4,-0.3 -0.739 34.0 -89.0-115.0 165.4 0.4 -41.4 204.5 40 78 A K T 3 S+ 0 0 212 1,-0.3 -2,-0.0 -2,-0.2 -1,-0.0 0.504 126.6 49.6 -50.8 -14.3 2.1 -44.0 202.1 41 79 A D T 3 S- 0 0 148 3,-0.1 -1,-0.3 2,-0.0 3,-0.1 0.514 125.1-102.6 -99.5 -11.5 -1.2 -46.0 201.5 42 80 A G S < S+ 0 0 61 -3,-2.6 -2,-0.2 1,-0.3 2,-0.1 0.622 84.2 127.4 89.0 26.5 -3.0 -42.7 200.7 43 81 A N - 0 0 93 -4,-0.3 -4,-2.9 1,-0.1 -1,-0.3 -0.330 65.7 -66.1 -96.5 179.3 -4.7 -42.7 204.1 44 82 A E B -A 38 0A 64 -6,-0.2 2,-0.3 -2,-0.1 -6,-0.3 -0.368 43.5-175.8 -74.1 143.7 -4.7 -39.9 206.8 45 83 A S + 0 0 41 -8,-2.7 -6,-0.0 -2,-0.1 0, 0.0 -0.997 3.5 179.1-141.6 141.5 -1.7 -38.6 208.8 46 84 A I - 0 0 48 -2,-0.3 2,-0.1 -19,-0.0 -9,-0.0 -0.990 19.1-137.4-141.3 134.7 -1.5 -36.0 211.7 47 85 A P > - 0 0 43 0, 0.0 4,-1.2 0, 0.0 47,-0.0 -0.237 36.3 -86.9 -84.3-176.6 1.7 -34.8 213.7 48 86 A S H > S+ 0 0 102 2,-0.2 4,-1.3 3,-0.2 5,-0.1 0.844 121.7 39.0 -59.3 -45.3 2.1 -34.1 217.5 49 87 A G H > S+ 0 0 29 2,-0.2 4,-1.4 1,-0.2 3,-0.2 0.944 118.2 47.4 -76.0 -45.7 0.9 -30.4 217.8 50 88 A V H > S+ 0 0 2 1,-0.2 4,-2.4 2,-0.2 -2,-0.2 0.751 107.8 60.8 -65.2 -23.1 -2.0 -30.8 215.3 51 89 A L H X S+ 0 0 94 -4,-1.2 4,-2.2 2,-0.3 5,-0.3 0.892 99.9 51.9 -67.5 -46.7 -2.8 -34.0 217.3 52 90 A I H X S+ 0 0 76 -4,-1.3 4,-2.5 -3,-0.2 5,-0.2 0.889 112.6 49.0 -60.2 -32.7 -3.4 -31.9 220.6 53 91 A F H X S+ 0 0 0 -4,-1.4 4,-2.9 37,-0.2 5,-0.5 0.957 108.8 50.5 -63.7 -58.1 -5.7 -29.9 218.3 54 92 A V H X S+ 0 0 6 -4,-2.4 4,-1.6 1,-0.2 5,-0.2 0.943 120.0 35.8 -52.0 -52.9 -7.6 -33.0 216.8 55 93 A A H X S+ 0 0 18 -4,-2.2 4,-1.9 2,-0.2 -1,-0.2 0.926 124.0 40.3 -62.2 -51.2 -8.3 -34.4 220.4 56 94 A K H X S+ 0 0 106 -4,-2.5 4,-1.2 -5,-0.3 -3,-0.2 0.854 116.1 50.3 -75.4 -30.3 -8.9 -31.1 222.3 57 95 A A H X S+ 0 0 0 -4,-2.9 4,-2.6 -5,-0.2 -3,-0.2 0.921 118.7 36.9 -64.6 -52.3 -10.9 -29.4 219.4 58 96 A A H X>S+ 0 0 0 -4,-1.6 4,-2.7 -5,-0.5 5,-0.5 0.766 113.5 55.2 -78.3 -28.6 -13.3 -32.3 219.0 59 97 A Q H <5S+ 0 0 36 -4,-1.9 4,-0.4 -5,-0.2 -2,-0.2 0.815 115.0 43.2 -73.5 -25.0 -13.5 -33.2 222.7 60 98 A F H X5S+ 0 0 108 -4,-1.2 4,-0.7 -5,-0.2 5,-0.2 0.937 123.3 36.9 -73.0 -54.7 -14.6 -29.6 223.2 61 99 A Y H X5S+ 0 0 34 -4,-2.6 4,-3.0 3,-0.2 5,-0.2 0.905 120.4 40.8 -68.8 -47.3 -17.0 -29.6 220.1 62 100 A M H X5S+ 0 0 29 -4,-2.7 4,-1.7 3,-0.2 5,-0.3 0.922 116.7 48.6 -71.1 -43.6 -18.6 -33.2 220.2 63 101 A T H 4> + 0 0 41 1,-0.2 3,-2.7 2,-0.1 4,-0.6 0.297 64.9 114.4 -75.8 -5.5 -20.5 -28.5 210.0 79 117 A F T 34 + 0 0 11 1,-0.3 -1,-0.2 2,-0.2 -2,-0.1 0.664 69.4 63.4 -49.1 -28.7 -16.6 -29.0 210.4 80 118 A A T 34 S+ 0 0 68 -3,-0.5 -1,-0.3 1,-0.2 -2,-0.1 0.525 121.3 19.8 -72.1 -19.0 -16.0 -26.5 207.6 81 119 A T T <4 S+ 0 0 112 -3,-2.7 -2,-0.2 0, 0.0 2,-0.2 0.188 126.3 49.7-136.1 7.3 -17.6 -23.7 209.7 82 120 A E < + 0 0 83 -4,-0.6 -21,-0.0 2,-0.1 0, 0.0 -0.693 46.5 98.8-140.2-171.9 -17.3 -25.2 213.2 83 121 A I S S- 0 0 5 -2,-0.2 5,-0.2 -26,-0.1 -25,-0.1 0.637 99.0 -49.7 82.9 122.5 -15.0 -26.9 215.8 84 122 A P >> - 0 0 20 0, 0.0 3,-1.5 0, 0.0 4,-1.1 0.160 49.6-132.8 -56.5 125.4 -13.9 -24.1 218.3 85 123 A S T 34 S+ 0 0 103 1,-0.3 4,-0.2 2,-0.2 -3,-0.0 0.563 101.8 52.5 -30.2 -41.0 -12.4 -20.8 216.7 86 124 A T T >4 S+ 0 0 122 2,-0.2 3,-0.9 1,-0.2 -1,-0.3 0.878 108.3 48.1 -71.2 -45.0 -9.3 -20.6 219.1 87 125 A I G X> S+ 0 0 19 -3,-1.5 3,-2.0 1,-0.2 4,-0.6 0.774 93.8 79.4 -70.2 -27.5 -8.0 -24.2 218.4 88 126 A L G 3< S+ 0 0 64 -4,-1.1 4,-0.3 1,-0.3 -1,-0.2 0.730 87.5 57.0 -50.8 -26.9 -8.5 -23.5 214.6 89 127 A K G <4 S+ 0 0 161 -3,-0.9 3,-0.4 -4,-0.2 -1,-0.3 0.713 99.8 58.6 -78.9 -19.9 -5.1 -21.6 214.7 90 128 A K T <4 S+ 0 0 76 -3,-2.0 -37,-0.2 -4,-0.2 -2,-0.2 0.573 89.0 75.6 -82.2 -13.1 -3.6 -24.9 216.1 91 129 A L S < S+ 0 0 9 -4,-0.6 3,-0.2 -3,-0.2 -1,-0.2 0.819 102.1 41.3 -55.8 -40.1 -4.8 -26.6 212.8 92 130 A N S >S+ 0 0 44 -3,-0.4 5,-0.5 -4,-0.3 3,-0.4 0.612 78.5 92.3 -90.8 -24.8 -1.9 -24.9 211.0 93 131 A P T 5S+ 0 0 62 0, 0.0 -1,-0.1 0, 0.0 3,-0.1 0.554 72.1 74.9 -69.2 -8.8 1.6 -24.8 212.9 94 132 A Y T 5S- 0 0 59 -3,-0.2 2,-0.3 1,-0.2 -2,-0.1 0.934 106.2 -15.4 -68.0 -57.0 3.3 -28.0 211.5 95 133 A R T 5S+ 0 0 123 -3,-0.4 2,-2.8 -60,-0.0 -1,-0.2 -0.959 128.1 6.1-148.5 153.7 4.5 -27.4 207.9 96 134 A K T 5S- 0 0 76 -2,-0.3 2,-1.4 1,-0.2 -4,-0.1 -0.214 72.3-162.3 68.4 -55.7 3.6 -24.6 205.4 97 135 A M < - 0 0 105 -2,-2.8 2,-0.3 -5,-0.5 -1,-0.2 -0.096 66.4 -9.8 68.7 -30.5 1.6 -22.7 208.1 98 136 A A 0 0 61 -2,-1.4 -68,-0.0 -65,-0.1 0, 0.0 -0.895 360.0 360.0-167.3-176.1 -0.3 -20.6 205.4 99 137 A R 0 0 158 -2,-0.3 -66,-0.1 0, 0.0 -67,-0.0 -0.932 360.0 360.0-150.0 360.0 0.0 -20.0 201.6