==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=6-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN BINDING 09-NOV-01 1KCN . COMPND 2 MOLECULE: E109 ZETA PEPTIDE; . SOURCE 2 SYNTHETIC: YES; . AUTHOR G.R.NAKAMURA,M.E.REYNOLDS,Y.M.CHEN,M.A.STAROVASNIK, . 21 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 1802.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 9 42.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 4.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 19.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 3 14.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 4.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 108 0, 0.0 4,-0.1 0, 0.0 18,-0.0 0.000 360.0 360.0 360.0 159.7 -7.7 -3.9 -1.5 2 2 A L + 0 0 178 17,-0.2 3,-0.1 2,-0.1 17,-0.1 0.912 360.0 51.4 -64.5 -45.4 -5.6 -5.9 1.0 3 3 A a S S- 0 0 29 16,-0.2 5,-0.1 1,-0.1 12,-0.1 -0.539 113.2 -77.8 -89.4 158.3 -4.1 -2.6 2.3 4 4 A P > - 0 0 82 0, 0.0 3,-1.5 0, 0.0 4,-0.4 -0.276 36.4-119.7 -68.2 146.4 -6.5 0.3 3.3 5 5 A A G >> S+ 0 0 67 1,-0.3 4,-2.6 2,-0.2 3,-1.7 0.793 105.4 71.8 -51.2 -41.0 -8.1 2.4 0.6 6 6 A V G 34>S+ 0 0 63 1,-0.3 5,-2.4 2,-0.2 -1,-0.3 0.782 90.3 60.6 -48.5 -38.0 -6.5 5.7 1.8 7 7 A b G <45S+ 0 0 2 -3,-1.5 -1,-0.3 3,-0.1 8,-0.2 0.819 117.8 28.6 -60.3 -36.6 -3.0 4.5 0.6 8 8 A Y T <45S+ 0 0 79 -3,-1.7 2,-0.4 -4,-0.4 -2,-0.2 0.910 140.7 5.6 -90.0 -56.9 -4.3 4.3 -3.0 9 9 A V T <5S+ 0 0 117 -4,-2.6 -1,-0.3 1,-0.0 3,-0.1 -0.994 119.9 43.4-136.9 123.3 -7.1 7.0 -3.0 10 10 A G T 5S+ 0 0 76 1,-0.6 -4,-0.1 -2,-0.4 -3,-0.1 -0.515 120.1 23.2 140.4 -64.4 -7.8 9.3 -0.1 11 11 A G S > - 0 0 90 0, 0.0 3,-1.3 0, 0.0 4,-0.5 -0.312 46.1-102.2 -67.5 159.3 4.8 -0.1 1.9 17 17 A D H >> S+ 0 0 110 1,-0.3 4,-2.8 2,-0.2 3,-1.4 0.818 115.6 68.6 -51.3 -41.9 5.7 -0.9 -1.7 18 18 A V H 34 S+ 0 0 116 1,-0.3 -1,-0.3 2,-0.2 0, 0.0 0.801 89.9 63.0 -51.9 -38.8 4.1 -4.4 -1.6 19 19 A a H <4 S+ 0 0 24 -3,-1.3 -1,-0.3 1,-0.2 -16,-0.2 0.850 117.1 28.5 -55.5 -38.7 0.6 -2.9 -1.4 20 20 A Y H << 0 0 94 -3,-1.4 -2,-0.2 -4,-0.5 -1,-0.2 0.908 360.0 360.0 -89.4 -52.6 1.0 -1.3 -4.8 21 21 A V < 0 0 131 -4,-2.8 -1,-0.2 0, 0.0 -2,-0.0 -0.573 360.0 360.0 -83.1 360.0 3.4 -3.8 -6.4