==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=6-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN BINDING 09-NOV-01 1KCO . COMPND 2 MOLECULE: E131 ZETA PEPTIDE; . SOURCE 2 SYNTHETIC: YES; . AUTHOR G.R.NAKAMURA,M.E.REYNOLDS,Y.M.CHEN,M.A.STAROVASNIK, . 21 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 1806.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 10 47.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 14.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 23.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 9.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A V 0 0 136 0, 0.0 2,-2.0 0, 0.0 18,-0.1 0.000 360.0 360.0 360.0 141.9 -3.0 -8.9 0.9 2 2 A Q + 0 0 137 16,-0.1 17,-0.1 2,-0.0 16,-0.1 -0.397 360.0 100.5 -80.1 59.3 -2.4 -8.1 4.6 3 3 A a S S- 0 0 20 -2,-2.0 5,-0.0 16,-0.1 12,-0.0 -0.991 73.1-112.8-150.3 134.4 -2.3 -4.3 3.7 4 4 A P > - 0 0 67 0, 0.0 3,-0.7 0, 0.0 4,-0.3 -0.159 29.7-107.9 -74.1 166.8 -5.0 -1.6 4.0 5 5 A H G > S+ 0 0 132 1,-0.2 3,-2.2 2,-0.2 4,-0.4 0.851 108.0 65.4 -63.0 -45.7 -6.7 0.2 1.1 6 6 A F G >> S+ 0 0 116 1,-0.3 4,-2.8 2,-0.2 3,-1.2 0.764 89.7 68.5 -56.2 -30.7 -5.1 3.7 1.3 7 7 A b G <4 S+ 0 0 2 -3,-0.7 -1,-0.3 1,-0.3 8,-0.2 0.783 103.1 45.3 -54.9 -31.4 -1.7 2.2 0.4 8 8 A Y G <4 S+ 0 0 71 -3,-2.2 3,-0.3 -4,-0.3 -1,-0.3 0.446 111.5 51.0 -98.8 -3.8 -3.1 1.5 -3.1 9 9 A E T <4 S+ 0 0 112 -3,-1.2 2,-1.3 -4,-0.4 -2,-0.2 0.833 116.0 41.4 -89.8 -50.4 -4.7 4.9 -3.5 10 10 A L S < S- 0 0 80 -4,-2.8 4,-0.5 1,-0.2 5,-0.2 -0.667 87.4-177.3 -89.5 71.7 -1.4 6.6 -2.5 11 11 A D + 0 0 106 -2,-1.3 -1,-0.2 -3,-0.3 4,-0.1 0.698 47.6 99.0 -52.3 -32.9 0.4 4.0 -4.8 12 12 A Y S S- 0 0 151 1,-0.1 2,-2.4 -3,-0.1 3,-0.5 -0.243 96.2 -93.1 -56.8 148.9 3.9 5.2 -3.9 13 13 A E S S+ 0 0 108 1,-0.2 -1,-0.1 6,-0.0 4,-0.1 -0.330 80.1 127.5 -77.6 64.7 5.6 3.1 -1.2 14 14 A L S S+ 0 0 86 -2,-2.4 -1,-0.2 -4,-0.5 -3,-0.1 0.710 72.7 62.8 -79.6 -24.9 4.7 5.0 2.0 15 15 A b S S- 0 0 12 -3,-0.5 5,-0.1 -5,-0.2 -12,-0.0 -0.592 112.9 -76.7 -89.9 158.9 3.4 1.6 3.2 16 16 A P > - 0 0 89 0, 0.0 3,-2.1 0, 0.0 4,-0.3 -0.243 44.3-110.0 -61.1 148.1 5.8 -1.4 3.6 17 17 A D G >> S+ 0 0 91 1,-0.3 4,-2.7 2,-0.2 3,-1.3 0.720 109.1 78.1 -52.5 -32.5 6.9 -3.1 0.3 18 18 A V G 34 S+ 0 0 73 1,-0.3 -1,-0.3 2,-0.2 -16,-0.1 0.772 86.6 62.9 -49.0 -33.8 4.9 -6.3 1.2 19 19 A a G <4 S+ 0 0 10 -3,-2.1 -1,-0.3 2,-0.2 -2,-0.2 0.902 121.3 18.2 -54.7 -47.2 1.8 -4.4 0.0 20 20 A Y T <4 0 0 69 -3,-1.3 -2,-0.2 -4,-0.3 -3,-0.1 0.898 360.0 360.0 -99.0 -53.6 3.0 -4.0 -3.6 21 21 A V < 0 0 138 -4,-2.7 -1,-0.2 0, 0.0 -2,-0.2 -0.706 360.0 360.0-114.4 360.0 5.8 -6.7 -3.9