==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 14-JAN-09 2KDP . COMPND 2 MOLECULE: HISTONE DEACETYLASE COMPLEX SUBUNIT SAP30; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR Y.HE,R.IMHOFF,A.SAHU,I.RADHAKRISHNAN . 71 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6097.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 36 50.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 8 11.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 11.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 5.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 14 19.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 61 A S 0 0 145 0, 0.0 3,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -64.7 -16.3 -1.9 11.3 2 62 A N + 0 0 141 1,-0.1 0, 0.0 2,-0.1 0, 0.0 0.022 360.0 35.4-114.2 26.2 -13.5 0.4 10.0 3 63 A A S S+ 0 0 75 19,-0.0 -1,-0.1 16,-0.0 16,-0.0 0.196 93.2 84.3-157.2 14.6 -10.6 -2.0 10.7 4 64 A G S S+ 0 0 64 15,-0.1 2,-0.1 2,-0.1 -2,-0.1 0.146 72.1 94.8-110.0 18.9 -12.0 -5.5 10.0 5 65 A Q S S- 0 0 108 15,-0.2 15,-2.0 16,-0.1 2,-0.3 -0.347 71.1-111.2 -98.7-177.8 -11.4 -5.4 6.3 6 66 A L B -A 19 0A 83 13,-0.3 13,-0.2 -2,-0.1 44,-0.2 -0.753 36.6 -81.7-116.8 164.2 -8.6 -6.8 4.2 7 67 A C - 0 0 6 11,-1.6 44,-0.2 -2,-0.3 10,-0.1 -0.227 27.5-146.4 -60.3 149.0 -5.8 -5.2 2.2 8 68 A C + 0 0 3 42,-0.4 35,-1.3 8,-0.1 2,-0.3 -0.181 67.2 92.9-111.6 38.5 -6.6 -4.1 -1.4 9 69 A L E -B 42 0B 0 33,-0.2 2,-0.6 5,-0.0 33,-0.2 -0.978 61.3-145.0-131.7 145.8 -3.2 -4.9 -2.9 10 70 A R E -B 41 0B 89 31,-1.3 2,-1.3 -2,-0.3 31,-0.7 -0.927 3.9-158.9-116.1 112.2 -1.9 -8.1 -4.7 11 71 A E E > S-BC 40 14B 93 3,-2.3 3,-0.5 -2,-0.6 29,-0.2 -0.711 85.3 -30.2 -89.9 90.7 1.7 -9.0 -4.2 12 72 A D T 3 S- 0 0 114 27,-1.6 -1,-0.2 -2,-1.3 3,-0.1 0.884 129.7 -41.7 68.3 40.1 2.3 -11.3 -7.2 13 73 A G T 3 S+ 0 0 39 -3,-0.3 2,-0.6 1,-0.3 -1,-0.2 0.381 111.8 126.5 89.0 -3.9 -1.3 -12.4 -7.3 14 74 A E B < -C 11 0B 127 -3,-0.5 2,-2.5 1,-0.1 -3,-2.3 -0.790 60.2-140.4 -93.4 122.5 -1.4 -12.7 -3.5 15 75 A R - 0 0 111 -2,-0.6 2,-1.6 -5,-0.2 -5,-0.2 -0.258 37.3-119.9 -77.3 57.9 -4.3 -10.9 -1.8 16 76 A C - 0 0 39 -2,-2.5 -1,-0.2 1,-0.2 3,-0.1 -0.151 23.5-145.8 41.9 -76.4 -2.0 -9.9 1.1 17 77 A G + 0 0 52 -2,-1.6 2,-0.2 1,-0.4 -1,-0.2 -0.091 63.0 110.5 109.4 -34.1 -4.0 -11.6 3.8 18 78 A R S S- 0 0 133 1,-0.1 -11,-1.6 -12,-0.1 -1,-0.4 -0.539 76.1-106.6 -75.4 138.7 -3.2 -9.0 6.5 19 79 A A B -A 6 0A 44 -2,-0.2 34,-0.3 -13,-0.2 -13,-0.3 -0.046 41.7 -87.4 -61.1 167.3 -6.2 -6.8 7.5 20 80 A A - 0 0 10 -15,-2.0 32,-0.3 32,-0.2 -15,-0.2 -0.472 43.6-159.8 -78.6 148.9 -6.5 -3.2 6.4 21 81 A G - 0 0 15 30,-3.6 -1,-0.1 -2,-0.2 31,-0.1 -0.021 39.2 -76.8-107.0-149.0 -5.0 -0.4 8.4 22 82 A N S S+ 0 0 157 28,-0.1 30,-0.1 -2,-0.1 2,-0.1 0.454 96.3 97.0 -95.7 -3.5 -5.4 3.4 8.8 23 83 A A - 0 0 15 28,-0.5 28,-0.5 1,-0.0 2,-0.3 -0.339 61.3-143.6 -83.3 167.7 -3.6 4.3 5.5 24 84 A S - 0 0 67 26,-0.2 2,-0.8 -2,-0.1 26,-0.2 -0.964 20.8-109.5-133.3 149.1 -5.2 5.0 2.2 25 85 A F + 0 0 43 -2,-0.3 2,-0.1 24,-0.3 31,-0.0 -0.686 52.1 164.3 -79.9 112.2 -4.3 4.2 -1.4 26 86 A S > - 0 0 45 -2,-0.8 4,-1.0 1,-0.0 5,-0.0 -0.376 51.3 -97.0-115.2-168.2 -3.3 7.5 -3.0 27 87 A K H > S+ 0 0 165 2,-0.2 4,-3.1 1,-0.1 5,-0.2 0.880 118.3 56.9 -78.9 -44.3 -1.5 8.8 -6.1 28 88 A R H > S+ 0 0 129 1,-0.2 4,-2.8 2,-0.2 -1,-0.1 0.888 107.7 49.3 -54.2 -42.8 1.8 9.3 -4.3 29 89 A I H > S+ 0 0 5 2,-0.2 4,-2.6 1,-0.2 -1,-0.2 0.902 110.5 50.3 -65.2 -41.2 1.8 5.7 -3.3 30 90 A Q H X S+ 0 0 95 -4,-1.0 4,-2.7 2,-0.2 -2,-0.2 0.960 113.4 45.0 -59.5 -51.8 1.0 4.7 -6.9 31 91 A K H X S+ 0 0 138 -4,-3.1 4,-2.3 1,-0.2 -2,-0.2 0.907 110.9 54.5 -57.9 -44.5 3.9 6.8 -8.2 32 92 A S H X S+ 0 0 5 -4,-2.8 4,-2.0 -5,-0.2 -1,-0.2 0.919 109.9 47.2 -56.2 -46.0 6.1 5.4 -5.5 33 93 A I H X S+ 0 0 14 -4,-2.6 4,-3.0 1,-0.2 5,-0.4 0.943 107.7 55.7 -61.0 -49.5 5.3 1.9 -6.6 34 94 A S H < S+ 0 0 61 -4,-2.7 -1,-0.2 1,-0.2 -2,-0.2 0.890 108.0 49.0 -50.7 -45.1 5.9 2.7 -10.2 35 95 A Q H < S+ 0 0 156 -4,-2.3 -1,-0.2 1,-0.2 -2,-0.2 0.937 112.5 46.6 -61.9 -47.4 9.4 4.0 -9.4 36 96 A K H < S- 0 0 59 -4,-2.0 -2,-0.2 -5,-0.2 -1,-0.2 0.861 100.9-147.2 -61.3 -34.8 10.2 0.8 -7.4 37 97 A K < + 0 0 171 -4,-3.0 2,-0.2 -5,-0.2 -3,-0.2 0.999 39.2 149.6 60.8 74.6 8.8 -1.2 -10.3 38 98 A V - 0 0 69 -5,-0.4 2,-1.5 2,-0.2 -1,-0.1 -0.775 61.0 -92.2-129.7 174.2 7.3 -4.1 -8.4 39 99 A K S S+ 0 0 141 -2,-0.2 -27,-1.6 2,-0.0 2,-0.4 -0.446 80.4 118.4 -88.5 63.2 4.4 -6.5 -8.7 40 100 A I E +B 11 0B 22 -2,-1.5 2,-0.3 -29,-0.2 -2,-0.2 -0.934 31.1 157.0-133.4 109.7 1.9 -4.5 -6.7 41 101 A E E -B 10 0B 139 -31,-0.7 -31,-1.3 -2,-0.4 2,-0.1 -0.941 43.5 -97.0-132.0 154.5 -1.3 -3.2 -8.3 42 102 A L E -B 9 0B 54 -2,-0.3 2,-0.5 -33,-0.2 -33,-0.2 -0.405 33.9-126.2 -69.6 143.0 -4.7 -2.1 -7.1 43 103 A D > - 0 0 24 -35,-1.3 3,-0.7 1,-0.1 -1,-0.1 -0.792 15.0-164.2 -91.3 125.6 -7.5 -4.6 -7.1 44 104 A K T 3 S+ 0 0 190 -2,-0.5 -1,-0.1 1,-0.2 -2,-0.0 0.615 81.6 74.1 -85.7 -12.7 -10.6 -3.3 -9.0 45 105 A S T 3 S+ 0 0 96 2,-0.0 -1,-0.2 0, 0.0 2,-0.0 0.528 84.7 91.8 -76.3 -3.7 -12.9 -6.0 -7.5 46 106 A A < - 0 0 38 -3,-0.7 3,-0.1 -38,-0.1 -38,-0.0 -0.237 61.7-156.3 -85.1 175.4 -12.8 -4.1 -4.2 47 107 A R S S+ 0 0 256 -2,-0.0 2,-0.2 1,-0.0 -1,-0.1 0.470 71.6 57.6-126.1 -15.3 -15.1 -1.4 -2.9 48 108 A H - 0 0 38 2,-0.1 2,-0.4 0, 0.0 -2,-0.1 -0.743 67.4-136.3-118.6 166.4 -12.8 0.4 -0.4 49 109 A L + 0 0 89 -2,-0.2 2,-0.4 -3,-0.1 -24,-0.3 -0.707 56.6 121.2-122.9 77.6 -9.5 2.2 -0.5 50 110 A Y - 0 0 107 -2,-0.4 -42,-0.4 -44,-0.2 -26,-0.2 -0.956 37.6-165.9-143.9 120.4 -7.6 1.0 2.6 51 111 A I - 0 0 0 -28,-0.5 -30,-3.6 -2,-0.4 -28,-0.5 -0.507 27.5 -98.2-100.1 171.0 -4.3 -0.8 2.7 52 112 A C > - 0 0 0 -32,-0.3 4,-1.8 -2,-0.2 -32,-0.2 -0.406 29.6-113.2 -84.6 164.1 -2.5 -2.7 5.4 53 113 A D H > S+ 0 0 72 -34,-0.3 4,-2.7 1,-0.2 5,-0.3 0.851 113.6 63.1 -64.1 -34.0 0.2 -1.3 7.7 54 114 A Y H > S+ 0 0 118 1,-0.2 4,-2.5 2,-0.2 -1,-0.2 0.966 108.9 36.2 -54.5 -61.2 2.7 -3.7 6.1 55 115 A H H > S+ 0 0 1 1,-0.2 4,-2.7 2,-0.2 5,-0.3 0.841 114.5 59.1 -64.1 -34.2 2.4 -2.3 2.6 56 116 A K H X S+ 0 0 54 -4,-1.8 4,-2.5 2,-0.2 5,-0.2 0.964 112.4 37.4 -59.0 -53.9 2.1 1.3 3.9 57 117 A N H X S+ 0 0 98 -4,-2.7 4,-2.4 2,-0.2 -2,-0.2 0.921 116.4 53.6 -63.4 -46.3 5.4 1.1 5.7 58 118 A L H < S+ 0 0 56 -4,-2.5 -2,-0.2 -5,-0.3 -1,-0.2 0.902 116.1 38.1 -56.4 -45.3 7.1 -0.9 3.0 59 119 A I H >< S+ 0 0 2 -4,-2.7 3,-0.8 -5,-0.2 4,-0.3 0.867 117.1 49.4 -77.2 -38.6 6.1 1.6 0.3 60 120 A Q H >< S+ 0 0 70 -4,-2.5 3,-1.0 -5,-0.3 -2,-0.2 0.880 103.2 59.8 -70.1 -38.4 6.6 4.8 2.3 61 121 A S T 3< S+ 0 0 52 -4,-2.4 -1,-0.2 1,-0.2 -2,-0.1 0.039 86.3 77.0 -85.1 30.3 10.1 4.0 3.6 62 122 A V T < S+ 0 0 77 -3,-0.8 -1,-0.2 -2,-0.2 3,-0.2 0.634 100.7 37.6-106.7 -22.7 11.7 3.7 0.2 63 123 A R S < S+ 0 0 121 -3,-1.0 -2,-0.1 -4,-0.3 2,-0.1 -0.021 122.8 44.3-114.6 25.9 12.0 7.5 -0.5 64 124 A N S S+ 0 0 128 0, 0.0 -1,-0.2 0, 0.0 3,-0.1 -0.512 77.8 85.9-171.2 92.8 12.8 8.4 3.2 65 125 A R S S+ 0 0 197 1,-0.6 2,-0.3 -3,-0.2 -3,-0.1 0.321 90.2 13.7-159.6 -38.6 15.3 6.3 5.2 66 126 A R - 0 0 191 1,-0.0 -1,-0.6 0, 0.0 3,-0.1 -0.857 41.7-162.9-141.1 175.1 18.8 7.7 4.5 67 127 A K S S+ 0 0 193 1,-0.3 2,-0.3 -2,-0.3 -1,-0.0 0.131 74.4 55.6-149.7 20.0 20.5 10.7 2.9 68 128 A R + 0 0 173 1,-0.1 -1,-0.3 2,-0.0 0, 0.0 -0.925 45.9 115.3-159.3 130.7 24.1 9.6 2.3 69 129 A K S S- 0 0 201 -2,-0.3 -1,-0.1 -3,-0.1 0, 0.0 0.293 98.4 -26.5-163.0 -35.9 25.5 6.6 0.4 70 130 A G 0 0 57 0, 0.0 -2,-0.0 0, 0.0 0, 0.0 0.330 360.0 360.0-162.9 -28.7 27.5 7.9 -2.5 71 131 A S 0 0 157 0, 0.0 -3,-0.0 0, 0.0 0, 0.0 -0.704 360.0 360.0-144.8 360.0 26.2 11.3 -3.5