==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN, MEMBRANE PROTEIN 15-JAN-09 2KDR . COMPND 2 MOLECULE: NON-STRUCTURAL PROTEIN 4B; . SOURCE 2 SYNTHETIC: YES; . AUTHOR R.MONTSERRET,F.PENIN . 28 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3085.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 23 82.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 23 82.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 X S 0 0 156 0, 0.0 4,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 106.2 -22.2 -0.9 -3.2 2 2 X D > + 0 0 99 3,-0.1 4,-3.0 2,-0.1 5,-0.2 0.724 360.0 64.0-108.4 -31.5 -19.5 1.8 -3.3 3 3 X A H > S+ 0 0 64 2,-0.2 4,-1.8 1,-0.2 5,-0.1 0.963 108.2 42.3 -59.3 -50.7 -18.9 2.3 0.5 4 4 X A H > S+ 0 0 66 1,-0.2 4,-1.7 2,-0.2 -1,-0.2 0.919 115.8 50.2 -63.5 -40.2 -17.6 -1.3 1.0 5 5 X A H > S+ 0 0 55 1,-0.2 4,-2.3 -4,-0.2 -2,-0.2 0.911 106.7 54.9 -65.5 -38.7 -15.6 -1.1 -2.2 6 6 X R H X S+ 0 0 163 -4,-3.0 4,-2.4 1,-0.2 -1,-0.2 0.901 104.7 54.3 -62.1 -36.4 -14.1 2.2 -1.1 7 7 X V H X S+ 0 0 95 -4,-1.8 4,-1.5 -5,-0.2 -1,-0.2 0.919 109.2 47.8 -63.7 -39.8 -12.9 0.5 2.1 8 8 X T H X S+ 0 0 100 -4,-1.7 4,-2.1 1,-0.2 -2,-0.2 0.891 109.7 53.4 -68.2 -36.6 -11.2 -2.2 -0.0 9 9 X A H X S+ 0 0 53 -4,-2.3 4,-2.3 2,-0.2 5,-0.2 0.930 103.9 55.0 -65.0 -42.5 -9.6 0.5 -2.2 10 10 X I H X S+ 0 0 110 -4,-2.4 4,-1.6 1,-0.2 -1,-0.2 0.925 109.9 47.6 -57.0 -42.0 -8.1 2.3 0.9 11 11 X L H X S+ 0 0 114 -4,-1.5 4,-2.0 1,-0.2 -1,-0.2 0.905 107.5 56.0 -66.6 -39.7 -6.5 -1.0 1.9 12 12 X S H X S+ 0 0 70 -4,-2.1 4,-1.6 1,-0.2 -2,-0.2 0.933 106.6 49.5 -59.6 -44.4 -5.1 -1.5 -1.7 13 13 X S H X S+ 0 0 70 -4,-2.3 4,-2.1 1,-0.2 -1,-0.2 0.910 107.2 55.6 -62.8 -39.1 -3.3 1.9 -1.6 14 14 X L H X S+ 0 0 102 -4,-1.6 4,-2.1 -5,-0.2 -1,-0.2 0.927 103.2 55.1 -60.2 -42.3 -1.8 0.9 1.8 15 15 X T H X S+ 0 0 62 -4,-2.0 4,-2.1 1,-0.2 -1,-0.2 0.925 107.1 50.5 -57.6 -42.5 -0.3 -2.2 0.2 16 16 X V H X S+ 0 0 84 -4,-1.6 4,-1.9 1,-0.2 -1,-0.2 0.928 107.4 53.2 -62.9 -42.9 1.4 -0.1 -2.5 17 17 X T H X S+ 0 0 79 -4,-2.1 4,-2.0 1,-0.2 -1,-0.2 0.908 108.1 51.4 -60.1 -39.5 2.9 2.3 0.2 18 18 X Q H X S+ 0 0 117 -4,-2.1 4,-2.3 2,-0.2 5,-0.2 0.947 106.2 53.1 -64.1 -46.0 4.4 -0.8 2.0 19 19 X L H X S+ 0 0 120 -4,-2.1 4,-2.0 1,-0.2 -1,-0.2 0.905 108.9 51.2 -56.6 -38.7 6.0 -2.1 -1.2 20 20 X L H X S+ 0 0 104 -4,-1.9 4,-2.4 2,-0.2 -1,-0.2 0.915 106.9 53.2 -66.4 -40.2 7.6 1.4 -1.6 21 21 X R H X S+ 0 0 194 -4,-2.0 4,-2.4 1,-0.2 -2,-0.2 0.923 109.0 49.3 -62.0 -41.2 9.0 1.3 2.0 22 22 X R H X S+ 0 0 190 -4,-2.3 4,-1.8 2,-0.2 -1,-0.2 0.921 109.8 51.6 -64.8 -41.2 10.6 -2.1 1.4 23 23 X L H X S+ 0 0 112 -4,-2.0 4,-1.8 -5,-0.2 -2,-0.2 0.945 112.1 45.6 -61.8 -45.7 12.2 -0.8 -1.9 24 24 X H H X S+ 0 0 121 -4,-2.4 4,-3.6 1,-0.2 -1,-0.2 0.911 107.9 57.9 -65.0 -39.4 13.7 2.3 -0.0 25 25 X Q H < S+ 0 0 126 -4,-2.4 -1,-0.2 -5,-0.2 -2,-0.2 0.891 107.9 47.6 -58.7 -36.6 14.9 0.0 2.8 26 26 X W H < S+ 0 0 220 -4,-1.8 -1,-0.2 -5,-0.2 -2,-0.2 0.887 116.7 42.6 -72.5 -37.6 16.9 -2.0 0.3 27 27 X I H < 0 0 110 -4,-1.8 -2,-0.2 1,-0.3 -3,-0.2 0.922 360.0 360.0 -75.5 -43.9 18.4 1.2 -1.3 28 28 X S < 0 0 129 -4,-3.6 -1,-0.3 -5,-0.2 0, 0.0 -0.978 360.0 360.0-129.5 360.0 19.1 3.1 2.0