==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=27-SEP-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CELL ADHESION 25-APR-13 4KDW . COMPND 2 MOLECULE: ANTIFREEZE PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: MARINOMONAS PRIMORYENSIS; . AUTHOR S.GUO,C.P.GARNHAM,S.P.KARUNAN,R.L.CAMPBELL,J.S.ALLINGHAM,P.L . 102 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5118.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 61 59.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 3 2.9 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 35 34.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 6.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 7.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 6 5.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 2 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 3 A A 0 0 44 0, 0.0 2,-0.5 0, 0.0 89,-0.1 0.000 360.0 360.0 360.0 139.6 -0.6 25.6 5.2 2 4 A T - 0 0 87 89,-0.1 34,-2.7 82,-0.1 35,-0.2 -0.811 360.0-126.5-109.8 130.7 -1.3 29.3 5.9 3 5 A A - 0 0 49 -2,-0.5 32,-0.2 32,-0.2 90,-0.1 -0.430 26.7-167.4 -64.3 143.6 -0.4 32.2 3.6 4 6 A G - 0 0 18 30,-0.2 2,-0.4 31,-0.1 30,-0.3 0.194 33.1 -72.5-102.4-137.2 1.7 35.0 5.2 5 7 A T E -A 33 0A 87 28,-2.8 28,-2.2 29,-0.1 2,-0.4 -0.999 37.1-168.1-131.7 128.7 2.5 38.4 3.9 6 8 A V E -A 32 0A 9 88,-0.4 2,-0.3 -2,-0.4 90,-0.2 -0.981 7.7-176.9-117.7 132.1 4.7 39.3 1.0 7 9 A T E -A 31 0A 55 24,-1.7 24,-1.6 -2,-0.4 2,-0.5 -0.910 16.3-146.5-124.8 151.0 5.8 42.9 0.2 8 10 A V E -A 30 0A 25 88,-0.4 22,-0.3 -2,-0.3 90,-0.1 -0.990 20.7-135.0-114.9 124.8 7.9 44.3 -2.6 9 11 A N - 0 0 74 20,-2.8 20,-0.1 -2,-0.5 4,-0.0 -0.133 45.8 -64.2 -67.5 167.1 10.2 47.3 -1.8 10 12 A A - 0 0 52 1,-0.1 2,-1.2 3,-0.1 19,-0.3 -0.264 54.0-111.1 -51.9 143.2 10.4 50.3 -4.1 11 13 A I S S- 0 0 1 87,-0.3 5,-0.4 -3,-0.1 89,-0.2 -0.697 92.3 -23.4 -84.7 95.8 11.9 49.4 -7.4 12 14 A T S > S- 0 0 28 -2,-1.2 3,-1.8 15,-0.4 5,-0.0 0.120 107.6 -60.3 65.9 172.8 15.2 51.3 -6.8 13 15 A S T 3 S+ 0 0 121 1,-0.3 -1,-0.2 2,-0.1 -3,-0.1 0.809 138.8 34.6 -56.0 -35.5 15.2 54.1 -4.3 14 16 A D T 3 S- 0 0 90 2,-0.3 -1,-0.3 -3,-0.1 -2,-0.1 0.349 106.5-114.8-106.1 10.6 12.5 56.3 -6.1 15 17 A D S < S+ 0 0 57 -3,-1.8 85,-1.8 1,-0.2 2,-0.3 0.785 83.8 110.0 66.4 20.1 10.3 53.5 -7.5 16 18 A V E -c 100 0B 32 -5,-0.4 2,-0.7 83,-0.2 -2,-0.3 -0.995 62.9-141.3-132.4 135.2 11.3 54.6 -11.0 17 19 A I E -c 101 0B 1 83,-2.4 85,-2.6 -2,-0.3 2,-0.1 -0.895 24.8-169.8 -96.3 117.0 13.5 53.0 -13.6 18 20 A N > - 0 0 56 -2,-0.7 4,-2.8 83,-0.2 5,-0.2 -0.389 39.7 -91.8 -95.8 176.9 15.7 55.5 -15.4 19 21 A A H > S+ 0 0 88 1,-0.2 4,-1.0 2,-0.2 53,-0.0 0.886 125.1 50.7 -64.7 -34.7 17.8 54.9 -18.5 20 22 A S H 4 S+ 0 0 99 2,-0.2 4,-0.4 1,-0.2 3,-0.3 0.913 112.4 46.0 -64.4 -43.3 20.9 54.0 -16.6 21 23 A E H >4 S+ 0 0 46 1,-0.2 3,-1.3 2,-0.2 47,-0.2 0.905 109.2 56.5 -66.9 -40.2 19.1 51.5 -14.4 22 24 A A H 3< S+ 0 0 23 -4,-2.8 47,-0.3 1,-0.3 -1,-0.2 0.784 101.7 57.7 -60.4 -27.8 17.4 50.0 -17.5 23 25 A A T 3< S+ 0 0 93 -4,-1.0 -1,-0.3 -3,-0.3 -2,-0.2 0.584 114.6 29.2 -79.1 -18.3 20.7 49.4 -19.0 24 26 A G S < S- 0 0 38 -3,-1.3 44,-2.7 -4,-0.4 45,-0.4 -0.301 98.2 -61.5-122.7-157.6 22.0 47.2 -16.2 25 27 A T E - B 0 67A 97 42,-0.2 2,-0.4 43,-0.1 42,-0.2 -0.787 40.8-159.7 -93.9 144.2 20.8 44.8 -13.4 26 28 A V E - B 0 66A 11 40,-2.9 40,-2.7 -2,-0.3 2,-0.7 -0.987 15.5-131.9-127.5 132.7 18.5 45.9 -10.7 27 29 A A E - B 0 65A 53 -2,-0.4 2,-0.6 38,-0.2 -15,-0.4 -0.743 19.0-161.7 -80.6 113.1 18.0 44.2 -7.3 28 30 A V E + B 0 64A 2 36,-3.0 36,-2.6 -2,-0.7 2,-0.3 -0.881 21.5 174.5 -93.4 127.1 14.3 43.7 -6.6 29 31 A S E + B 0 63A 36 -2,-0.6 -20,-2.8 -19,-0.3 2,-0.3 -0.827 11.1 137.5-130.9 168.9 13.8 43.1 -2.9 30 32 A G E -AB 8 62A 2 32,-2.1 32,-2.0 -22,-0.3 2,-0.3 -0.926 40.0 -78.5-179.9-161.6 11.1 42.6 -0.3 31 33 A T E -AB 7 61A 36 -24,-1.6 -24,-1.7 -2,-0.3 2,-0.3 -0.852 19.7-173.7-124.1 160.1 9.8 40.7 2.7 32 34 A A E +A 6 0A 2 28,-2.7 2,-0.3 -2,-0.3 -26,-0.2 -0.827 29.1 137.8-155.1 104.3 8.1 37.4 3.3 33 35 A T E +A 5 0A 75 -28,-2.2 -28,-2.8 -2,-0.3 3,-0.1 -0.954 30.7 45.4-144.7 164.7 6.9 36.7 6.8 34 36 A G S > S+ 0 0 44 -2,-0.3 3,-2.1 -30,-0.3 -30,-0.2 -0.061 83.3 39.7 87.0 171.0 3.9 35.2 8.7 35 37 A G T 3 S- 0 0 48 1,-0.3 -1,-0.2 -32,-0.2 -32,-0.2 -0.219 127.5 -31.2 53.7-136.4 1.8 32.1 8.2 36 38 A D T 3 S+ 0 0 57 -34,-2.7 48,-0.5 -3,-0.1 -1,-0.3 0.218 94.7 136.5-100.6 16.0 3.9 29.2 7.2 37 39 A I < + 0 0 21 -3,-2.1 2,-0.3 -35,-0.2 -3,-0.2 -0.390 29.9 172.7 -62.0 135.8 6.6 31.2 5.3 38 40 A A > - 0 0 49 -5,-0.1 3,-2.1 -2,-0.1 18,-0.3 -0.982 39.7 -76.1-142.2 158.1 10.1 30.0 6.1 39 41 A E T 3 S+ 0 0 139 -2,-0.3 18,-0.2 1,-0.3 19,-0.1 -0.252 116.0 31.0 -45.9 133.0 13.7 30.5 5.1 40 42 A G T 3 S+ 0 0 44 16,-3.0 -1,-0.3 1,-0.3 17,-0.1 0.211 82.6 138.1 95.9 -14.9 14.4 28.7 1.9 41 43 A D < - 0 0 20 -3,-2.1 15,-2.5 16,-0.1 -1,-0.3 -0.381 59.4-105.9 -63.5 144.8 10.9 29.1 0.4 42 44 A T E -DE 55 82C 57 40,-0.6 40,-1.9 13,-0.2 2,-0.5 -0.435 26.0-157.8 -73.8 144.0 10.9 30.0 -3.2 43 45 A V E -DE 54 81C 0 11,-2.7 11,-2.3 38,-0.2 2,-0.5 -0.993 12.5-166.6-122.1 120.7 10.1 33.5 -4.3 44 46 A T E +DE 53 80C 44 36,-2.9 36,-2.7 -2,-0.5 2,-0.4 -0.948 9.6 180.0-119.1 128.5 8.9 33.8 -8.0 45 47 A L E -DE 52 79C 0 7,-3.1 7,-3.1 -2,-0.5 2,-0.6 -0.992 13.3-158.2-124.8 122.8 8.5 37.1 -10.0 46 48 A E E +D 51 0C 122 32,-0.6 2,-0.4 -2,-0.4 32,-0.3 -0.908 20.7 173.7 -99.8 117.7 7.4 37.1 -13.6 47 49 A I E > -D 50 0C 0 3,-2.6 3,-2.1 -2,-0.6 24,-0.1 -0.991 68.8 -16.8-130.9 117.2 8.6 40.4 -15.1 48 50 A N T 3 S- 0 0 79 -2,-0.4 -1,-0.1 1,-0.3 3,-0.1 0.831 128.5 -55.0 55.8 34.5 8.1 41.0 -18.9 49 51 A G T 3 S+ 0 0 52 1,-0.2 2,-0.4 21,-0.0 -1,-0.3 0.294 114.6 116.0 85.9 -12.6 7.4 37.4 -19.3 50 52 A E E < -D 47 0C 100 -3,-2.1 -3,-2.6 20,-0.0 2,-0.6 -0.818 61.3-135.2 -94.5 132.0 10.7 36.3 -17.7 51 53 A T E -D 46 0C 72 -2,-0.4 2,-0.4 -5,-0.2 -5,-0.2 -0.788 21.2-171.8 -91.7 121.9 10.6 34.2 -14.5 52 54 A Y E -D 45 0C 32 -7,-3.1 -7,-3.1 -2,-0.6 2,-0.4 -0.895 7.5-170.7-112.2 136.6 13.0 35.4 -11.8 53 55 A T E +D 44 0C 80 -2,-0.4 2,-0.2 -9,-0.2 -9,-0.2 -0.987 16.8 151.0-135.7 139.8 13.4 33.3 -8.7 54 56 A T E -D 43 0C 35 -11,-2.3 -11,-2.7 -2,-0.4 2,-0.3 -0.763 35.6-108.8-140.4-166.0 15.1 33.6 -5.3 55 57 A T E -D 42 0C 72 8,-0.3 8,-0.4 -13,-0.3 2,-0.3 -0.946 30.7 -99.9-130.8 154.1 14.6 32.2 -1.9 56 58 A V - 0 0 3 -15,-2.5 -16,-3.0 -2,-0.3 6,-0.2 -0.545 43.7-137.1 -71.6 130.9 13.4 33.7 1.4 57 59 A D > - 0 0 60 4,-3.0 3,-1.3 -2,-0.3 -16,-0.1 -0.137 30.9 -88.0 -83.9-177.7 16.5 34.4 3.7 58 60 A A T 3 S+ 0 0 62 1,-0.2 -19,-0.2 2,-0.1 -1,-0.1 0.694 123.2 50.2 -71.6 -11.4 16.8 33.7 7.3 59 61 A N T 3 S- 0 0 128 2,-0.1 -1,-0.2 -26,-0.0 3,-0.1 0.168 120.8 -94.8-114.2 14.5 15.4 37.1 8.3 60 62 A G S < S+ 0 0 12 -3,-1.3 -28,-2.7 1,-0.3 2,-0.3 0.749 89.2 113.1 81.2 16.7 12.2 37.2 6.3 61 63 A E E -B 31 0A 105 -30,-0.3 -4,-3.0 -6,-0.0 2,-0.3 -0.792 41.5-170.9-120.2 162.9 13.7 39.1 3.4 62 64 A W E -B 30 0A 7 -32,-2.0 -32,-2.1 -2,-0.3 2,-0.3 -0.991 5.2-174.3-149.7 154.9 14.5 38.4 -0.2 63 65 A S E -B 29 0A 56 -8,-0.4 2,-0.4 -2,-0.3 -8,-0.3 -0.969 2.3-175.9-150.6 139.7 16.3 39.9 -3.2 64 66 A V E -B 28 0A 12 -36,-2.6 -36,-3.0 -2,-0.3 2,-0.5 -0.999 26.5-123.3-137.4 140.3 16.6 38.9 -6.8 65 67 A D E -B 27 0A 108 -2,-0.4 2,-0.3 -38,-0.2 -38,-0.2 -0.710 34.5-176.7 -82.5 128.0 18.6 40.4 -9.6 66 68 A V E -B 26 0A 1 -40,-2.7 -40,-2.9 -2,-0.5 2,-0.3 -0.914 34.9-100.2-124.8 145.0 16.5 41.4 -12.6 67 69 A A E >> -B 25 0A 33 -2,-0.3 4,-1.4 -42,-0.2 3,-0.9 -0.496 26.8-139.9 -61.0 128.4 17.3 42.8 -16.0 68 70 A G H 3> S+ 0 0 0 -44,-2.7 4,-2.0 -2,-0.3 -45,-0.2 0.842 103.1 60.8 -59.0 -30.7 16.7 46.6 -15.8 69 71 A S H 3> S+ 0 0 74 -45,-0.4 4,-1.3 -47,-0.3 -1,-0.3 0.848 100.4 52.3 -69.6 -32.3 15.2 46.2 -19.4 70 72 A D H <> S+ 0 0 26 -3,-0.9 4,-1.5 2,-0.2 -1,-0.2 0.900 111.1 47.8 -65.4 -41.7 12.6 43.8 -18.1 71 73 A L H < S+ 0 0 0 -4,-1.4 -2,-0.2 1,-0.2 -1,-0.2 0.813 108.8 54.1 -69.3 -31.5 11.6 46.4 -15.5 72 74 A A H < S+ 0 0 33 -4,-2.0 -1,-0.2 -5,-0.2 -2,-0.2 0.797 114.1 42.4 -71.0 -27.0 11.6 49.1 -18.1 73 75 A A H < S+ 0 0 62 -4,-1.3 2,-0.4 1,-0.2 -2,-0.2 0.746 117.2 45.0 -87.4 -25.0 9.1 47.0 -20.2 74 76 A D < - 0 0 42 -4,-1.5 -1,-0.2 -5,-0.1 3,-0.0 -0.975 55.5-179.5-135.1 109.5 6.8 45.7 -17.3 75 77 A T + 0 0 65 -2,-0.4 24,-1.9 -3,-0.1 2,-0.3 0.335 69.3 46.4 -95.3 6.1 5.6 48.2 -14.7 76 78 A A E + F 0 98C 49 22,-0.2 2,-0.3 2,-0.0 22,-0.2 -0.988 61.8 147.6-151.4 134.1 3.5 45.7 -12.6 77 79 A F E - F 0 97C 12 20,-2.1 20,-2.2 -2,-0.3 2,-0.3 -0.981 34.1-121.5-157.3 162.6 4.3 42.3 -11.3 78 80 A D E - F 0 96C 75 -32,-0.3 -32,-0.6 -2,-0.3 2,-0.5 -0.836 10.9-145.5-104.2 147.8 3.6 39.9 -8.4 79 81 A A E -EF 45 95C 0 16,-3.1 16,-2.4 -2,-0.3 2,-0.5 -0.979 22.1-165.5-106.3 123.8 6.1 38.2 -6.0 80 82 A V E -EF 44 94C 30 -36,-2.7 -36,-2.9 -2,-0.5 2,-0.5 -0.950 6.2-162.6-117.1 121.9 4.8 34.8 -5.2 81 83 A V E -EF 43 93C 0 12,-2.9 12,-2.6 -2,-0.5 2,-0.5 -0.899 7.7-151.7-105.4 130.3 6.2 32.8 -2.2 82 84 A T E +EF 42 92C 48 -40,-1.9 -40,-0.6 -2,-0.5 2,-0.3 -0.908 23.1 176.1-103.4 125.1 5.6 29.0 -2.1 83 85 A S E - F 0 91C 2 8,-3.0 8,-2.1 -2,-0.5 2,-0.3 -0.825 16.9-152.3-128.0 163.0 5.5 27.6 1.4 84 86 A S E - F 0 90C 59 -48,-0.5 6,-0.2 -2,-0.3 2,-0.1 -0.971 9.7-139.1-132.6 149.1 4.8 24.3 3.1 85 87 A D > - 0 0 36 4,-2.2 3,-1.7 -2,-0.3 6,-0.0 -0.335 45.0 -86.0 -93.8-177.0 3.6 23.3 6.5 86 88 A A T 3 S+ 0 0 116 1,-0.3 -1,-0.0 2,-0.1 -2,-0.0 0.686 129.8 51.8 -69.5 -18.7 5.0 20.4 8.6 87 89 A A T 3 S- 0 0 84 2,-0.1 -1,-0.3 0, 0.0 0, 0.0 0.335 121.6-106.0 -92.5 -5.1 2.7 17.9 6.9 88 90 A G < + 0 0 51 -3,-1.7 2,-0.2 1,-0.3 -2,-0.1 0.545 68.7 149.4 90.0 3.8 3.9 19.1 3.4 89 91 A N - 0 0 90 1,-0.0 -4,-2.2 -5,-0.0 -1,-0.3 -0.524 36.4-144.4 -59.9 143.0 0.7 21.0 2.6 90 92 A T E +F 84 0C 103 -6,-0.2 2,-0.3 -2,-0.2 -6,-0.2 -0.755 21.8 177.4-117.6 157.2 1.6 23.9 0.3 91 93 A V E -F 83 0C 31 -8,-2.1 -8,-3.0 -2,-0.3 2,-0.4 -0.987 20.9-135.0-153.7 147.0 0.4 27.5 -0.1 92 94 A D E -F 82 0C 93 -2,-0.3 2,-0.5 -10,-0.2 -10,-0.2 -0.919 12.3-162.3-105.5 137.8 1.2 30.5 -2.2 93 95 A T E -F 81 0C 5 -12,-2.6 -12,-2.9 -2,-0.4 2,-0.4 -0.976 13.6-159.1-114.9 129.5 1.5 34.0 -0.7 94 96 A T E -F 80 0C 74 -2,-0.5 -88,-0.4 -14,-0.2 2,-0.4 -0.907 14.6-178.8-116.5 137.6 1.3 36.9 -3.2 95 97 A G E -F 79 0C 8 -16,-2.4 -16,-3.1 -2,-0.4 2,-0.2 -0.991 20.1-139.4-126.9 143.7 2.5 40.5 -3.0 96 98 A S E -F 78 0C 90 -2,-0.4 -88,-0.4 -90,-0.2 2,-0.4 -0.631 14.8-169.1-104.3 152.8 2.0 43.0 -5.7 97 99 A S E -F 77 0C 13 -20,-2.2 -20,-2.1 -2,-0.2 2,-0.3 -1.000 7.0-178.4-140.7 144.0 4.3 45.7 -7.1 98 100 A T E +F 76 0C 96 -2,-0.4 -87,-0.3 -22,-0.2 2,-0.3 -0.953 10.3 163.7-131.9 155.9 4.0 48.6 -9.4 99 101 A H - 0 0 6 -24,-1.9 2,-0.3 -2,-0.3 -83,-0.2 -0.915 26.6-120.8-150.7 177.0 6.7 51.1 -10.6 100 102 A T E -c 16 0B 84 -85,-1.8 -83,-2.4 -2,-0.3 2,-0.4 -0.848 13.0-135.9-123.6 171.7 7.2 53.7 -13.3 101 103 A V E c 17 0B 58 -2,-0.3 -83,-0.2 -85,-0.2 -85,-0.0 -0.990 360.0 360.0-129.3 128.2 9.7 54.1 -16.0 102 104 A D 0 0 162 -85,-2.6 -84,-0.2 -2,-0.4 -1,-0.2 0.986 360.0 360.0 -66.3 360.0 11.3 57.5 -16.8