==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIBIOTIC, HORMONE 29-JAN-09 2KEF . COMPND 2 MOLECULE: HEPCIDIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR J.B.JORDAN,L.POPPE,M.HAINU,T.ARVEDSON,R.SYED,V.LI,H.KOHNO, . 25 1 4 4 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2499.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 9 36.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 5 20.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 4.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 4.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 8.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A D 0 0 212 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-174.0 2.1 -0.0 -1.2 2 2 A T - 0 0 78 4,-0.0 4,-0.1 1,-0.0 2,-0.0 -0.963 360.0-117.9-133.5 150.1 5.5 1.4 -2.1 3 3 A H - 0 0 166 -2,-0.3 -1,-0.0 2,-0.1 0, 0.0 -0.224 44.6 -79.6 -78.1 172.0 6.8 4.5 -3.8 4 4 A F S S+ 0 0 141 2,-0.0 2,-0.2 19,-0.0 19,-0.0 -0.975 89.9 29.9-147.7 159.4 8.9 4.6 -7.0 5 5 A P S S+ 0 0 78 0, 0.0 2,-0.3 0, 0.0 -2,-0.1 0.593 78.0 169.7 -69.8 173.4 11.3 4.4 -8.5 6 6 A I - 0 0 65 -2,-0.2 18,-2.0 -4,-0.1 2,-0.6 -0.993 33.1-125.6-151.2 153.4 12.8 1.8 -6.1 7 7 A a E +A 23 0A 53 -2,-0.3 2,-0.3 16,-0.3 16,-0.3 -0.900 48.4 128.8-106.4 121.4 15.8 -0.5 -6.0 8 8 A I E -A 22 0A 102 14,-2.2 14,-2.3 -2,-0.6 2,-0.2 -0.915 54.6 -78.4-155.3 179.4 15.2 -4.2 -5.3 9 9 A F E +A 21 0A 139 -2,-0.3 2,-0.3 12,-0.3 12,-0.3 -0.537 44.7 166.8 -88.3 155.2 15.9 -7.8 -6.5 10 10 A b E > -A 20 0A 45 10,-2.1 10,-2.4 -2,-0.2 2,-1.2 -0.938 38.1-124.1-167.4 143.5 14.2 -9.4 -9.4 11 11 A c T 3 S+ 0 0 95 -2,-0.3 8,-0.2 8,-0.3 6,-0.2 -0.713 101.3 15.0 -95.1 87.2 14.5 -12.5 -11.6 12 12 A G T 3 S+ 0 0 52 4,-1.7 2,-0.3 -2,-1.2 5,-0.2 0.727 95.3 118.0 117.4 48.4 14.6 -11.1 -15.2 13 13 A b < + 0 0 31 3,-0.8 -1,-0.3 -3,-0.5 -3,-0.1 -0.913 67.1 12.0-138.1 164.3 15.2 -7.3 -14.9 14 14 A d S S- 0 0 62 -2,-0.3 -1,-0.1 1,-0.2 7,-0.1 0.830 137.3 -48.7 34.5 45.6 17.8 -4.8 -16.0 15 15 A H S S+ 0 0 180 -3,-0.1 -1,-0.2 1,-0.1 2,-0.1 0.988 110.2 124.2 61.8 62.7 19.3 -7.5 -18.2 16 16 A R + 0 0 137 1,-0.1 -4,-1.7 2,-0.1 -3,-0.8 -0.525 27.9 172.2-153.5 78.1 19.4 -10.3 -15.5 17 17 A S S S+ 0 0 114 -5,-0.2 -1,-0.1 -6,-0.2 3,-0.1 0.942 83.0 47.2 -52.0 -54.2 17.5 -13.5 -16.4 18 18 A K S S- 0 0 188 1,-0.1 2,-0.2 -7,-0.1 -1,-0.1 0.972 126.7 -67.3 -51.2 -81.9 18.8 -15.3 -13.4 19 19 A c + 0 0 50 -8,-0.2 2,-0.3 -6,-0.1 -8,-0.3 -0.611 61.2 158.7 178.0 116.9 18.2 -12.7 -10.6 20 20 A G E -A 10 0A 5 -10,-2.4 -10,-2.1 -4,-0.4 2,-0.5 -0.878 36.0-109.3-140.1 172.2 19.7 -9.3 -9.9 21 21 A M E +A 9 0A 108 -2,-0.3 2,-0.3 -12,-0.3 -12,-0.3 -0.913 44.9 147.7-110.0 129.0 19.1 -6.1 -8.1 22 22 A d E -A 8 0A 41 -14,-2.3 -14,-2.2 -2,-0.5 2,-0.3 -0.940 41.6-104.7-150.0 169.6 18.3 -2.8 -9.9 23 23 A a E -A 7 0A 74 -2,-0.3 -16,-0.3 -16,-0.3 -9,-0.1 -0.777 23.6-126.2-102.9 146.2 16.3 0.4 -9.6 24 24 A K 0 0 129 -18,-2.0 -17,-0.1 -2,-0.3 -1,-0.1 0.697 360.0 360.0 -60.3 -17.8 13.1 1.2 -11.5 25 25 A T 0 0 154 -19,-0.1 -1,-0.2 0, 0.0 -18,-0.1 0.170 360.0 360.0 38.5 360.0 14.9 4.3 -12.7