==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIMICROBIAL PROTEIN 30-JAN-09 2KEG . COMPND 2 MOLECULE: PLNK; . SOURCE 2 SYNTHETIC: YES; . AUTHOR P.ROGNE,M.HAUGEN,G.FIMLAND,J.NISSEN-MEYER,P.KRISTIANSEN . 32 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3702.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 15 46.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 3.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 3.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 13 40.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A R 0 0 249 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 13.2 2.1 0.0 -1.2 2 2 A R - 0 0 219 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.057 360.0 -85.6-147.7 23.5 1.0 -3.6 -1.9 3 3 A S S S+ 0 0 96 1,-0.0 3,-0.0 4,-0.0 0, 0.0 0.551 101.8 117.2 78.8 8.5 -2.8 -3.3 -1.6 4 4 A R S S+ 0 0 209 1,-0.2 4,-0.3 3,-0.1 5,-0.2 0.602 71.3 55.5 -80.8 -13.1 -2.4 -3.8 2.1 5 5 A K S S+ 0 0 145 1,-0.2 2,-0.7 2,-0.1 4,-0.4 0.693 104.6 56.1 -89.3 -23.5 -3.8 -0.3 2.6 6 6 A N S S+ 0 0 129 1,-0.1 -1,-0.2 3,-0.1 0, 0.0 -0.807 99.7 50.4-113.5 88.0 -7.0 -1.2 0.7 7 7 A G S S+ 0 0 37 -2,-0.7 -1,-0.1 -3,-0.2 -2,-0.1 0.119 118.6 23.7 178.3 -37.4 -8.5 -4.2 2.3 8 8 A I S > S+ 0 0 137 -4,-0.3 4,-1.6 2,-0.1 5,-0.2 0.663 118.2 56.9-114.9 -35.5 -8.7 -3.6 6.1 9 9 A G H > S+ 0 0 36 -4,-0.4 4,-2.1 -5,-0.2 -3,-0.1 0.791 104.2 56.0 -68.0 -29.2 -8.8 0.2 6.1 10 10 A Y H > S+ 0 0 142 2,-0.2 4,-2.2 3,-0.2 -1,-0.2 0.839 101.9 56.6 -71.0 -35.0 -11.8 0.2 3.8 11 11 A A H > S+ 0 0 41 2,-0.2 4,-2.0 1,-0.2 5,-0.2 0.967 115.8 34.6 -60.0 -56.2 -13.7 -2.0 6.3 12 12 A I H X S+ 0 0 100 -4,-1.6 4,-3.0 1,-0.2 5,-0.4 0.848 118.7 54.2 -66.8 -35.1 -13.3 0.4 9.1 13 13 A G H X S+ 0 0 37 -4,-2.1 4,-1.3 -5,-0.2 -1,-0.2 0.779 107.5 51.7 -68.8 -28.0 -13.6 3.3 6.6 14 14 A Y H X S+ 0 0 168 -4,-2.2 4,-0.8 3,-0.2 -2,-0.2 0.922 116.8 36.4 -73.9 -47.2 -16.9 1.8 5.4 15 15 A A H X S+ 0 0 52 -4,-2.0 4,-1.5 2,-0.2 -2,-0.2 0.948 130.0 33.9 -70.1 -51.0 -18.5 1.6 8.8 16 16 A F H X S+ 0 0 106 -4,-3.0 4,-3.0 2,-0.2 3,-0.3 0.963 119.2 49.5 -68.4 -54.9 -16.9 4.8 10.1 17 17 A G H X S+ 0 0 27 -4,-1.3 4,-1.7 -5,-0.4 -1,-0.2 0.740 107.8 59.8 -56.3 -23.8 -16.9 6.6 6.8 18 18 A A H X S+ 0 0 40 -4,-0.8 4,-1.0 2,-0.2 -1,-0.2 0.943 109.9 38.1 -69.9 -49.9 -20.6 5.6 6.6 19 19 A V H X S+ 0 0 94 -4,-1.5 4,-0.8 -3,-0.3 3,-0.3 0.857 118.2 51.1 -68.4 -36.5 -21.6 7.3 9.8 20 20 A E H X S+ 0 0 89 -4,-3.0 4,-2.0 1,-0.2 3,-0.3 0.815 98.4 67.2 -69.4 -31.6 -19.2 10.2 9.0 21 21 A R H < S+ 0 0 183 -4,-1.7 -1,-0.2 -5,-0.3 -2,-0.2 0.882 97.9 52.3 -55.2 -41.6 -20.8 10.4 5.5 22 22 A A H >< S+ 0 0 79 -4,-1.0 3,-1.1 -3,-0.3 4,-0.4 0.843 107.1 53.3 -63.4 -34.3 -24.0 11.6 7.2 23 23 A V H 3< S+ 0 0 72 -4,-0.8 3,-0.2 -3,-0.3 -1,-0.2 0.859 110.4 45.9 -67.9 -36.7 -22.0 14.2 9.0 24 24 A L T 3< S+ 0 0 109 -4,-2.0 -1,-0.3 1,-0.2 -2,-0.2 0.208 86.9 108.0 -89.6 14.1 -20.6 15.4 5.7 25 25 A G S < S- 0 0 58 -3,-1.1 -1,-0.2 -5,-0.2 -2,-0.2 0.980 99.2 -15.8 -52.7 -72.9 -24.2 15.3 4.3 26 26 A G S S- 0 0 65 -4,-0.4 2,-0.2 1,-0.3 3,-0.1 0.819 101.6 -85.6 -97.8 -85.7 -24.9 19.0 4.1 27 27 A S S S+ 0 0 89 1,-0.1 -1,-0.3 -4,-0.0 -2,-0.1 -0.755 73.5 111.3-162.5-152.2 -22.4 21.2 6.0 28 28 A R + 0 0 231 -2,-0.2 -1,-0.1 -4,-0.1 -2,-0.1 0.986 39.1 139.5 63.2 61.9 -21.7 22.7 9.4 29 29 A D S S- 0 0 69 -3,-0.1 2,-0.2 -5,-0.1 3,-0.1 0.584 72.6 -5.6-106.1 -19.5 -18.6 20.6 10.2 30 30 A Y + 0 0 189 1,-0.1 -3,-0.0 2,-0.1 0, 0.0 -0.544 63.5 122.5-146.0-149.1 -16.7 23.5 11.7 31 31 A N 0 0 155 1,-0.2 -1,-0.1 -2,-0.2 0, 0.0 0.894 360.0 360.0 79.9 44.3 -16.9 27.2 12.4 32 32 A K 0 0 250 -3,-0.1 -1,-0.2 0, 0.0 -2,-0.1 0.640 360.0 360.0 66.3 360.0 -16.6 26.9 16.1