==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-JAN-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION REPRESSOR 30-JAN-09 2KEL . COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN 56B; . SOURCE 2 ORGANISM_SCIENTIFIC: SULFOLOBUS ISLANDICUS ROD-SHAPED VIRUS . AUTHOR F.GUILLIERE,A.KESSLER,N.PEIXEIRO,G.SEZONOV,D.PRANGISHVILI, . 92 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5685.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 62 67.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 10 10.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 50 54.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 11 A K 0 0 229 0, 0.0 2,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -27.6 -9.8 13.2 4.2 2 12 A Q - 0 0 98 1,-0.0 57,-2.5 56,-0.0 2,-0.2 -0.582 360.0-150.0 -69.7 123.2 -11.6 10.7 6.4 3 13 A K E +A 58 0A 158 -2,-0.4 2,-0.3 55,-0.3 55,-0.2 -0.621 24.0 174.2-107.1 153.7 -8.8 8.9 8.2 4 14 A A E -A 57 0A 20 53,-2.7 53,-1.0 -2,-0.2 2,-0.3 -0.922 26.2-118.1-142.5 168.7 -8.2 5.5 9.6 5 15 A V E -A 56 0A 85 -2,-0.3 2,-0.3 51,-0.2 51,-0.2 -0.727 19.9-164.6-109.0 162.2 -5.3 3.6 11.1 6 16 A F E -A 55 0A 23 49,-1.5 49,-1.5 -2,-0.3 2,-0.4 -0.951 9.4-179.9-150.8 124.0 -3.5 0.6 9.9 7 17 A G E +A 54 0A 63 -2,-0.3 2,-0.3 47,-0.2 47,-0.2 -0.841 24.8 149.3-129.8 96.0 -1.1 -1.7 11.7 8 18 A I E -A 53 0A 11 45,-1.5 45,-1.6 -2,-0.4 2,-0.8 -0.760 48.6-118.4-125.1 166.8 0.2 -4.6 9.7 9 19 A Y E +A 52 0A 157 -2,-0.3 43,-0.2 43,-0.2 2,-0.2 -0.844 44.8 166.6-107.6 94.3 3.3 -6.8 9.3 10 20 A M E -A 51 0A 1 41,-0.9 41,-2.7 -2,-0.8 68,-0.1 -0.666 42.6 -81.0-106.4 161.5 4.6 -6.3 5.8 11 21 A D E > -A 50 0A 53 39,-0.2 4,-1.6 -2,-0.2 39,-0.3 -0.174 33.0-135.3 -61.1 155.9 8.0 -7.3 4.4 12 22 A K H > S+ 0 0 106 37,-2.5 4,-3.8 2,-0.2 5,-0.3 0.991 98.1 47.4 -76.8 -63.6 11.0 -5.1 5.1 13 23 A D H > S+ 0 0 97 1,-0.2 4,-2.0 2,-0.2 -1,-0.1 0.823 117.3 46.0 -50.1 -39.1 12.8 -4.8 1.8 14 24 A L H > S+ 0 0 10 2,-0.2 4,-2.0 1,-0.2 -1,-0.2 0.966 117.6 39.7 -70.2 -55.0 9.5 -4.0 0.1 15 25 A K H X S+ 0 0 28 -4,-1.6 4,-1.6 1,-0.2 -2,-0.2 0.850 118.8 50.9 -62.0 -32.8 8.2 -1.4 2.7 16 26 A T H X S+ 0 0 49 -4,-3.8 4,-2.2 2,-0.2 -1,-0.2 0.828 103.2 57.1 -77.8 -33.9 11.8 -0.1 2.9 17 27 A R H X S+ 0 0 97 -4,-2.0 4,-1.7 -5,-0.3 -2,-0.2 0.949 110.6 44.8 -56.4 -50.1 12.0 0.2 -0.9 18 28 A L H X S+ 0 0 0 -4,-2.0 4,-2.4 2,-0.2 -2,-0.2 0.852 107.6 59.1 -62.3 -36.1 9.0 2.5 -0.6 19 29 A K H X S+ 0 0 110 -4,-1.6 4,-1.1 2,-0.2 -1,-0.2 0.899 106.9 47.0 -58.4 -39.9 10.7 4.2 2.4 20 30 A V H X S+ 0 0 56 -4,-2.2 4,-2.5 2,-0.2 -2,-0.2 0.822 108.0 55.6 -71.1 -31.7 13.5 5.0 0.0 21 31 A Y H X S+ 0 0 6 -4,-1.7 4,-2.5 2,-0.2 6,-0.5 0.883 107.9 48.7 -63.8 -38.6 11.0 6.2 -2.5 22 32 A C H < S+ 0 0 7 -4,-2.4 -2,-0.2 2,-0.2 -1,-0.2 0.743 112.0 49.5 -73.3 -24.1 9.7 8.5 0.3 23 33 A A H < S+ 0 0 60 -4,-1.1 -2,-0.2 3,-0.2 -1,-0.2 0.853 112.7 47.0 -79.2 -36.8 13.3 9.6 0.8 24 34 A K H < S+ 0 0 109 -4,-2.5 -2,-0.2 1,-0.2 -3,-0.2 0.906 125.0 29.6 -72.4 -44.3 13.8 10.2 -2.8 25 35 A N S < S- 0 0 73 -4,-2.5 -1,-0.2 -5,-0.1 -2,-0.2 0.403 105.2-124.7 -94.5 1.7 10.6 12.2 -3.4 26 36 A N + 0 0 147 -6,-0.2 -3,-0.2 -5,-0.2 -4,-0.2 0.735 60.7 155.5 56.0 24.4 10.7 13.4 0.2 27 37 A L - 0 0 47 -6,-0.5 2,-0.4 -5,-0.1 -1,-0.2 -0.183 49.9 -99.8 -72.3 167.2 7.2 11.9 0.3 28 38 A Q > - 0 0 129 1,-0.1 4,-2.5 -3,-0.1 5,-0.2 -0.776 24.5-129.0 -87.7 135.7 5.4 10.7 3.4 29 39 A L H > S+ 0 0 45 -2,-0.4 4,-2.4 1,-0.2 5,-0.2 0.925 111.4 45.8 -45.5 -52.0 5.5 7.0 4.0 30 40 A T H > S+ 0 0 27 1,-0.2 4,-3.0 2,-0.2 5,-0.2 0.931 109.7 53.0 -59.4 -49.5 1.7 7.0 4.5 31 41 A Q H > S+ 0 0 82 1,-0.2 4,-2.3 2,-0.2 -1,-0.2 0.867 110.9 48.9 -55.4 -38.1 1.1 9.1 1.4 32 42 A A H X S+ 0 0 0 -4,-2.5 4,-2.8 2,-0.2 -1,-0.2 0.909 110.4 49.2 -69.9 -44.4 3.2 6.7 -0.6 33 43 A I H X S+ 0 0 2 -4,-2.4 4,-3.6 -5,-0.2 5,-0.3 0.931 112.3 49.3 -57.7 -46.1 1.3 3.6 0.7 34 44 A E H X S+ 0 0 32 -4,-3.0 4,-2.1 1,-0.2 -2,-0.2 0.904 113.0 45.7 -62.9 -43.5 -2.0 5.3 -0.0 35 45 A E H X S+ 0 0 72 -4,-2.3 4,-2.7 -5,-0.2 -1,-0.2 0.892 115.3 49.9 -63.4 -39.0 -0.9 6.2 -3.6 36 46 A A H X S+ 0 0 1 -4,-2.8 4,-0.9 1,-0.2 -2,-0.2 0.966 115.6 39.3 -62.7 -54.7 0.4 2.6 -3.9 37 47 A I H X S+ 0 0 1 -4,-3.6 4,-1.7 2,-0.2 -1,-0.2 0.780 116.1 54.8 -70.6 -26.1 -2.7 1.0 -2.7 38 48 A K H X S+ 0 0 66 -4,-2.1 4,-1.6 -5,-0.3 3,-0.3 0.974 111.1 41.0 -68.9 -55.9 -4.8 3.5 -4.6 39 49 A E H X S+ 0 0 45 -4,-2.7 4,-0.9 1,-0.2 -1,-0.2 0.609 111.6 62.0 -70.9 -9.8 -3.2 3.0 -8.0 40 50 A Y H X S+ 0 0 3 -4,-0.9 4,-1.0 -5,-0.2 -1,-0.2 0.909 101.9 47.2 -80.3 -46.5 -3.3 -0.7 -7.2 41 51 A L H X S+ 0 0 0 -4,-1.7 4,-1.9 -3,-0.3 3,-0.2 0.893 115.8 45.5 -61.2 -40.4 -7.0 -1.0 -6.9 42 52 A Q H < S+ 0 0 119 -4,-1.6 -1,-0.2 1,-0.2 -2,-0.2 0.801 112.4 50.6 -76.2 -28.6 -7.5 0.9 -10.2 43 53 A K H < S+ 0 0 101 -4,-0.9 -1,-0.2 -5,-0.2 -2,-0.2 0.660 125.7 29.1 -77.5 -16.1 -4.8 -1.2 -11.9 44 54 A R H < S- 0 0 100 -4,-1.0 -2,-0.2 -3,-0.2 -3,-0.2 0.831 111.7 -97.1-106.8 -72.8 -6.6 -4.2 -10.6 45 55 A N < 0 0 103 -4,-1.9 -4,-0.1 -5,-0.2 23,-0.0 -0.014 360.0 360.0 178.9 -61.4 -10.3 -3.8 -10.2 46 56 A G 0 0 14 -6,-0.1 25,-0.1 19,-0.1 -4,-0.1 0.051 360.0 360.0 109.8 360.0 -11.5 -3.0 -6.7 47 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 48 11 B K 0 0 227 0, 0.0 2,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -27.1 10.0 -13.2 4.4 49 12 B Q - 0 0 100 1,-0.0 -37,-2.5 -38,-0.0 2,-0.2 -0.586 360.0-150.1 -70.2 123.0 11.8 -10.6 6.5 50 13 B K E +A 11 0A 158 -2,-0.4 2,-0.3 -39,-0.3 -39,-0.2 -0.619 23.9 174.2-107.0 153.6 9.0 -8.8 8.3 51 14 B A E -A 10 0A 20 -41,-2.7 -41,-0.9 -2,-0.2 2,-0.3 -0.918 26.2-118.1-142.4 168.9 8.4 -5.4 9.6 52 15 B V E -A 9 0A 86 -2,-0.3 2,-0.3 -43,-0.2 -43,-0.2 -0.740 19.9-164.6-109.5 161.9 5.5 -3.5 11.1 53 16 B F E +A 8 0A 22 -45,-1.6 -45,-1.5 -2,-0.3 2,-0.4 -0.954 9.5 180.0-150.6 124.3 3.7 -0.4 9.9 54 17 B G E +A 7 0A 64 -2,-0.3 2,-0.3 -47,-0.2 -47,-0.2 -0.842 24.8 149.5-130.0 95.8 1.3 1.9 11.7 55 18 B I E -A 6 0A 11 -49,-1.5 -49,-1.5 -2,-0.4 2,-0.8 -0.766 48.5-118.5-124.9 166.5 0.0 4.8 9.6 56 19 B Y E +A 5 0A 158 -2,-0.3 -51,-0.2 -51,-0.2 2,-0.2 -0.847 44.9 166.6-107.3 94.4 -3.1 7.0 9.2 57 20 B M E -A 4 0A 1 -53,-1.0 -53,-2.7 -2,-0.8 -26,-0.1 -0.669 42.7 -80.9-106.4 161.4 -4.4 6.4 5.8 58 21 B D E > -A 3 0A 52 -55,-0.2 4,-1.6 -2,-0.2 -55,-0.3 -0.166 33.0-135.2 -61.0 156.1 -7.8 7.3 4.3 59 22 B K H > S+ 0 0 106 -57,-2.5 4,-3.7 2,-0.2 5,-0.3 0.991 98.1 47.4 -77.2 -63.5 -10.8 5.2 5.1 60 23 B D H > S+ 0 0 95 1,-0.2 4,-2.1 2,-0.2 -1,-0.1 0.828 117.4 45.9 -49.9 -39.7 -12.6 4.8 1.7 61 24 B L H > S+ 0 0 9 2,-0.2 4,-2.0 1,-0.2 -1,-0.2 0.966 117.6 39.8 -69.6 -55.4 -9.3 4.0 0.1 62 25 B K H X S+ 0 0 28 -4,-1.6 4,-1.6 1,-0.2 -2,-0.2 0.846 118.8 50.8 -61.9 -32.7 -8.0 1.5 2.7 63 26 B T H X S+ 0 0 49 -4,-3.7 4,-2.2 2,-0.2 -1,-0.2 0.830 103.1 57.2 -78.1 -33.8 -11.6 0.2 2.9 64 27 B R H X S+ 0 0 97 -4,-2.1 4,-1.7 -5,-0.3 -2,-0.2 0.949 110.7 44.8 -56.3 -49.9 -11.8 -0.2 -0.8 65 28 B L H X S+ 0 0 0 -4,-2.0 4,-2.4 2,-0.2 -2,-0.2 0.852 107.6 59.1 -62.5 -36.1 -8.8 -2.5 -0.6 66 29 B K H X S+ 0 0 110 -4,-1.6 4,-1.1 2,-0.2 -1,-0.2 0.900 106.9 47.0 -58.2 -40.1 -10.5 -4.1 2.4 67 30 B V H X S+ 0 0 56 -4,-2.2 4,-2.5 2,-0.2 -2,-0.2 0.820 108.0 55.6 -71.1 -31.5 -13.3 -5.0 0.1 68 31 B Y H X S+ 0 0 6 -4,-1.7 4,-2.5 2,-0.2 6,-0.4 0.882 107.9 48.7 -64.1 -38.4 -10.8 -6.2 -2.4 69 32 B C H < S+ 0 0 8 -4,-2.4 -2,-0.2 2,-0.2 -1,-0.2 0.741 112.0 49.5 -73.2 -24.3 -9.5 -8.5 0.4 70 33 B A H < S+ 0 0 60 -4,-1.1 -2,-0.2 3,-0.2 -1,-0.2 0.848 112.7 47.0 -79.2 -36.8 -13.1 -9.6 1.0 71 34 B K H < S+ 0 0 110 -4,-2.5 -2,-0.2 1,-0.2 -3,-0.2 0.907 125.0 29.5 -72.4 -44.1 -13.7 -10.3 -2.7 72 35 B N S < S- 0 0 72 -4,-2.5 -1,-0.2 -5,-0.1 -2,-0.2 0.399 105.2-124.7 -94.5 1.4 -10.5 -12.2 -3.2 73 36 B N + 0 0 147 -6,-0.2 -3,-0.2 -5,-0.2 -4,-0.2 0.748 60.7 155.5 56.0 25.0 -10.5 -13.4 0.4 74 37 B L - 0 0 47 -6,-0.4 2,-0.4 -5,-0.2 -1,-0.2 -0.211 49.9-100.0 -72.9 167.0 -7.0 -11.9 0.5 75 38 B Q > - 0 0 129 1,-0.1 4,-2.5 -3,-0.1 5,-0.2 -0.769 24.5-129.0 -87.8 135.5 -5.2 -10.7 3.6 76 39 B L H > S+ 0 0 45 -2,-0.4 4,-2.4 1,-0.2 5,-0.2 0.925 111.3 46.1 -45.1 -52.1 -5.3 -6.9 4.1 77 40 B T H > S+ 0 0 27 1,-0.2 4,-3.0 2,-0.2 5,-0.2 0.934 109.7 52.8 -59.3 -49.6 -1.5 -6.9 4.6 78 41 B Q H > S+ 0 0 82 1,-0.2 4,-2.3 2,-0.2 -1,-0.2 0.868 110.9 49.0 -55.7 -37.8 -0.9 -9.1 1.6 79 42 B A H X S+ 0 0 0 -4,-2.5 4,-2.8 2,-0.2 -1,-0.2 0.905 110.4 49.1 -70.1 -44.1 -3.0 -6.7 -0.5 80 43 B I H X S+ 0 0 2 -4,-2.4 4,-3.7 -5,-0.2 5,-0.3 0.932 112.4 49.3 -57.8 -46.5 -1.1 -3.6 0.8 81 44 B E H X S+ 0 0 33 -4,-3.0 4,-2.0 1,-0.2 -2,-0.2 0.902 113.1 45.6 -62.5 -43.6 2.2 -5.4 0.0 82 45 B E H X S+ 0 0 72 -4,-2.3 4,-2.7 -5,-0.2 -1,-0.2 0.895 115.4 50.0 -63.4 -39.2 1.0 -6.3 -3.5 83 46 B A H X S+ 0 0 1 -4,-2.8 4,-0.9 1,-0.2 -2,-0.2 0.968 115.5 39.3 -62.7 -54.8 -0.2 -2.7 -3.8 84 47 B I H X S+ 0 0 1 -4,-3.7 4,-1.7 2,-0.2 -1,-0.2 0.778 116.1 54.8 -70.3 -26.0 2.9 -1.0 -2.7 85 48 B K H X S+ 0 0 65 -4,-2.0 4,-1.6 -5,-0.3 3,-0.3 0.974 111.1 41.1 -69.2 -55.7 5.0 -3.6 -4.6 86 49 B E H X S+ 0 0 45 -4,-2.7 4,-1.0 1,-0.2 -1,-0.2 0.613 111.6 62.0 -71.0 -9.9 3.4 -3.1 -8.0 87 50 B Y H X S+ 0 0 3 -4,-0.9 4,-1.0 -5,-0.2 -1,-0.2 0.910 101.9 47.1 -80.1 -46.5 3.4 0.6 -7.2 88 51 B L H X S+ 0 0 0 -4,-1.7 4,-1.8 -3,-0.3 3,-0.2 0.895 115.8 45.6 -61.2 -40.4 7.2 0.9 -6.9 89 52 B Q H < S+ 0 0 121 -4,-1.6 -1,-0.2 1,-0.2 -2,-0.2 0.814 112.4 50.5 -76.0 -29.0 7.7 -1.0 -10.2 90 53 B K H < S+ 0 0 100 -4,-1.0 -1,-0.2 -5,-0.2 -2,-0.2 0.664 125.7 29.2 -77.1 -16.4 5.0 1.0 -11.9 91 54 B R H < S- 0 0 101 -4,-1.0 -2,-0.2 -3,-0.2 -3,-0.2 0.828 111.7 -97.1-106.5 -73.4 6.7 4.1 -10.7 92 55 B N < 0 0 103 -4,-1.8 -4,-0.1 -5,-0.2 -71,-0.0 -0.002 360.0 360.0 179.3 -61.4 10.5 3.7 -10.3 93 56 B G 0 0 14 -6,-0.1 -69,-0.1 -75,-0.1 -4,-0.1 0.052 360.0 360.0 110.2 360.0 11.6 3.0 -6.7