==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSPORT PROTEIN 02-FEB-09 2KEP . COMPND 2 MOLECULE: GENERAL SECRETION PATHWAY PROTEIN G; . SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; . AUTHOR S.ALPHONSE,E.DURAND,B.DOUZI,H.DARBON,A.FILLOUX,R.VOULHOUX, . 110 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6506.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 62 56.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 8 7.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 12 10.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 7.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 26 23.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 39 A M 0 0 104 0, 0.0 2,-1.0 0, 0.0 9,-0.3 0.000 360.0 360.0 360.0 98.4 5.6 5.2 -0.9 2 40 A S + 0 0 123 5,-0.1 3,-0.0 8,-0.1 5,-0.0 -0.736 360.0 93.5-107.1 82.3 4.8 2.3 -3.1 3 41 A R S > S- 0 0 174 -2,-1.0 4,-2.0 0, 0.0 3,-0.4 -0.933 86.9 -67.1-154.6 159.1 7.6 -0.2 -2.6 4 42 A P T 4 S+ 0 0 116 0, 0.0 2,-1.4 0, 0.0 97,-0.1 -0.251 121.5 5.8 -52.0 138.5 8.1 -3.3 -0.4 5 43 A D T >> S+ 0 0 59 1,-0.2 4,-0.9 95,-0.0 3,-0.6 -0.121 122.3 71.3 73.0 -35.9 8.3 -2.3 3.3 6 44 A Q H 3> S+ 0 0 16 -2,-1.4 4,-2.4 -3,-0.4 -1,-0.2 0.790 88.8 63.3 -74.2 -25.5 7.5 1.3 2.4 7 45 A A H 3< S+ 0 0 44 -4,-2.0 4,-0.5 1,-0.2 -1,-0.2 0.676 100.2 52.1 -68.1 -18.5 4.1 -0.1 1.7 8 46 A K H <> S+ 0 0 96 -3,-0.6 4,-1.8 -5,-0.2 -1,-0.2 0.786 108.0 52.4 -85.3 -25.6 4.0 -0.8 5.4 9 47 A V H X S+ 0 0 5 -4,-0.9 4,-1.8 1,-0.2 -2,-0.2 0.932 104.0 54.2 -74.6 -44.4 5.0 2.8 6.1 10 48 A T H X S+ 0 0 69 -4,-2.4 4,-0.5 -9,-0.3 -1,-0.2 0.756 108.6 50.7 -65.7 -25.5 2.2 4.3 4.1 11 49 A V H >> S+ 0 0 84 -4,-0.5 3,-1.5 -5,-0.2 4,-1.3 0.961 109.7 48.8 -73.5 -49.8 -0.3 2.2 6.0 12 50 A A H 3X S+ 0 0 0 -4,-1.8 4,-3.2 1,-0.3 5,-0.3 0.751 98.9 68.3 -64.4 -24.7 1.0 3.4 9.4 13 51 A K H 3X S+ 0 0 95 -4,-1.8 4,-1.0 1,-0.2 -1,-0.3 0.838 106.0 41.8 -65.7 -26.4 1.0 7.0 8.2 14 52 A G H S+ 0 0 74 -4,-0.4 4,-1.7 2,-0.2 -2,-0.2 0.783 106.6 48.8 -83.6 -28.4 -10.4 12.1 22.2 26 64 A Y H X S+ 0 0 1 -4,-1.6 4,-2.3 2,-0.2 6,-0.4 0.849 104.9 60.9 -71.5 -36.1 -8.5 11.2 25.4 27 65 A K H < S+ 0 0 82 -4,-2.0 5,-0.5 1,-0.2 -2,-0.2 0.851 108.1 43.6 -53.9 -36.1 -8.0 14.9 25.7 28 66 A L H >< S+ 0 0 97 -4,-0.8 3,-0.8 3,-0.2 -2,-0.2 0.877 110.2 55.4 -76.5 -36.7 -11.7 15.0 25.8 29 67 A D H 3< S+ 0 0 2 -4,-1.7 23,-3.1 1,-0.3 -2,-0.2 0.793 125.2 22.9 -72.0 -23.8 -12.0 12.0 28.3 30 68 A N T 3< S- 0 0 28 -4,-2.3 -1,-0.3 2,-0.4 -2,-0.2 0.113 103.5-123.3-129.2 20.0 -9.8 13.7 30.8 31 69 A F S < S+ 0 0 122 -3,-0.8 2,-0.3 -5,-0.2 -3,-0.2 0.653 89.0 52.3 43.0 33.0 -10.3 17.2 29.7 32 70 A A S S- 0 0 42 -5,-0.5 -2,-0.4 -6,-0.4 -3,-0.1 -0.963 95.3 -84.2-178.9 159.1 -6.5 17.4 29.2 33 71 A Y - 0 0 70 -2,-0.3 52,-0.1 1,-0.1 6,-0.1 -0.530 49.3-105.1 -78.6 151.5 -3.7 15.7 27.7 34 72 A P - 0 0 5 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 -0.214 31.2-117.2 -66.3 162.3 -2.0 12.8 29.4 35 73 A S > - 0 0 51 43,-0.1 5,-0.9 1,-0.1 4,-0.2 -0.745 25.5-114.2 -98.6 156.3 1.4 13.2 31.1 36 74 A T T 5S+ 0 0 47 43,-0.5 -1,-0.1 -2,-0.3 44,-0.1 0.690 116.1 29.6 -67.8 -12.6 4.3 11.2 29.8 37 75 A Q T >5S+ 0 0 139 3,-0.1 4,-1.9 40,-0.1 5,-0.2 0.792 135.2 23.2-102.1 -64.7 4.3 9.3 33.1 38 76 A Q H >5S+ 0 0 110 1,-0.2 4,-2.1 2,-0.2 10,-0.2 0.910 127.4 48.0 -74.1 -40.9 0.8 9.3 34.5 39 77 A G H 45S+ 0 0 3 -4,-0.2 -1,-0.2 2,-0.2 4,-0.2 0.744 106.3 57.1 -74.5 -20.9 -0.9 9.8 31.3 40 78 A L H >>X S+ 0 0 84 -4,-1.9 4,-3.5 1,-0.3 3,-0.9 0.879 111.3 57.3 -61.0 -33.5 -0.2 4.7 32.3 42 80 A A H 3< S+ 0 0 5 -4,-2.1 -1,-0.3 1,-0.3 -2,-0.2 0.502 103.6 53.4 -77.4 -7.1 -3.5 6.4 31.7 43 81 A L H <4 S+ 0 0 0 -3,-1.4 17,-1.9 -4,-0.2 18,-0.5 0.558 120.6 31.2 -95.9 -18.5 -3.3 5.4 28.1 44 82 A V H << S+ 0 0 68 -3,-0.9 2,-0.3 -4,-0.8 -2,-0.2 0.733 130.6 28.7-104.9 -34.3 -2.7 1.7 29.0 45 83 A K S < S- 0 0 95 -4,-3.5 -1,-0.3 -5,-0.2 3,-0.1 -0.849 108.2 -73.6-126.0 152.3 -4.7 1.5 32.3 46 84 A K - 0 0 156 -2,-0.3 -3,-0.1 1,-0.1 2,-0.1 -0.264 62.0 -98.9 -54.7 135.1 -7.8 3.6 33.2 47 85 A P - 0 0 11 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 -0.302 31.2-138.1 -60.9 125.0 -6.8 7.3 34.1 48 86 A T S S+ 0 0 102 -10,-0.2 2,-0.5 -2,-0.1 -6,-0.1 -0.646 74.9 38.6 -84.1 139.9 -6.5 8.0 37.7 49 87 A G S S- 0 0 54 -2,-0.3 -19,-0.0 2,-0.1 0, 0.0 -0.982 116.5 -26.4 123.1-131.8 -8.0 11.3 38.7 50 88 A N + 0 0 125 -2,-0.5 2,-0.3 -20,-0.1 -2,-0.1 -0.880 58.1 175.1-127.2 97.4 -11.2 12.5 37.1 51 89 A P - 0 0 58 0, 0.0 -21,-0.3 0, 0.0 -22,-0.1 -0.774 32.5-117.9 -92.5 150.3 -12.1 11.3 33.6 52 90 A Q - 0 0 85 -23,-3.1 2,-1.1 -2,-0.3 -24,-0.0 -0.372 46.0 -78.6 -79.7 160.3 -15.5 12.4 32.1 53 91 A P S S+ 0 0 142 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 -0.540 88.3 124.9 -64.6 97.6 -18.1 9.8 31.2 54 92 A K S S- 0 0 83 -2,-1.1 2,-1.5 -25,-0.1 -28,-0.0 -0.956 73.7 -98.0-152.7 147.3 -16.5 8.7 28.0 55 93 A N - 0 0 146 -2,-0.3 -26,-0.1 2,-0.0 -3,-0.0 -0.660 43.8-148.8 -81.8 92.7 -15.5 5.3 26.8 56 94 A W - 0 0 44 -2,-1.5 2,-0.4 -27,-0.1 -10,-0.1 -0.263 9.3-154.5 -54.9 143.7 -11.8 5.3 27.6 57 95 A N - 0 0 53 -35,-0.1 3,-0.3 -12,-0.1 4,-0.2 -0.974 1.5-146.5-126.4 137.2 -9.6 3.2 25.3 58 96 A K S >> S+ 0 0 126 -2,-0.4 3,-1.3 1,-0.2 4,-0.6 -0.067 71.6 68.2 -84.7-169.1 -6.2 1.6 26.1 59 97 A D T 34 S- 0 0 64 1,-0.3 -15,-0.2 -16,-0.2 -1,-0.2 0.559 133.2 -56.3 71.1 12.5 -3.2 1.1 23.7 60 98 A G T 34 S- 0 0 0 -17,-1.9 -1,-0.3 -3,-0.3 -2,-0.1 0.559 97.3 -62.8 100.5 15.0 -2.7 4.8 23.6 61 99 A Y T <4 S+ 0 0 9 -3,-1.3 -39,-0.3 -18,-0.5 2,-0.2 0.936 81.3 170.9 66.4 91.8 -6.2 5.7 22.4 62 100 A L < - 0 0 18 -4,-0.6 2,-0.1 -40,-0.2 -2,-0.1 -0.668 31.6-116.6-123.9 171.3 -6.4 4.1 19.1 63 101 A K - 0 0 77 -2,-0.2 2,-2.5 -48,-0.2 -1,-0.1 -0.230 63.7 -62.0 -94.1-168.6 -9.1 3.5 16.4 64 102 A K S S+ 0 0 197 -2,-0.1 -1,-0.0 0, 0.0 0, 0.0 -0.458 96.9 127.5 -76.7 70.9 -10.2 -0.0 15.3 65 103 A L - 0 0 52 -2,-2.5 3,-0.1 1,-0.1 -3,-0.0 -0.937 57.1-127.1-130.3 147.6 -6.7 -0.8 14.1 66 104 A P - 0 0 101 0, 0.0 -3,-0.1 0, 0.0 2,-0.1 -0.015 48.8 -74.9 -74.7-168.5 -4.2 -3.6 14.6 67 105 A V - 0 0 70 1,-0.2 4,-0.1 6,-0.0 5,-0.1 -0.353 63.1 -76.2 -86.1 173.8 -0.6 -2.9 15.7 68 106 A D - 0 0 2 4,-0.5 3,-0.5 1,-0.1 4,-0.2 -0.211 56.5 -90.8 -72.8 157.6 2.1 -1.5 13.4 69 107 A P S > S+ 0 0 24 0, 0.0 3,-1.3 0, 0.0 -1,-0.1 -0.041 104.2 48.1 -59.8 171.5 3.8 -3.6 10.7 70 108 A W T 3 S- 0 0 65 1,-0.3 -2,-0.1 23,-0.0 21,-0.0 0.567 125.8 -80.9 68.5 15.1 7.0 -5.5 11.2 71 109 A G T 3 S+ 0 0 70 -3,-0.5 -1,-0.3 1,-0.3 -3,-0.1 0.627 91.0 143.6 69.5 14.2 5.5 -6.9 14.4 72 110 A N < - 0 0 23 -3,-1.3 -4,-0.5 -4,-0.2 2,-0.3 -0.580 47.4-128.8 -84.2 142.3 6.4 -3.7 16.3 73 111 A P - 0 0 78 0, 0.0 17,-0.3 0, 0.0 -6,-0.0 -0.768 33.8 -98.5 -85.0 147.7 4.1 -2.3 19.0 74 112 A Y - 0 0 14 -2,-0.3 2,-0.7 15,-0.1 15,-0.2 -0.286 28.3-138.2 -67.3 141.9 3.1 1.4 18.9 75 113 A Q E -A 88 0A 37 13,-3.2 13,-2.9 2,-0.0 2,-0.5 -0.912 23.8-178.3-104.6 112.8 5.0 3.7 21.0 76 114 A Y E +A 87 0A 38 -2,-0.7 2,-0.3 11,-0.2 11,-0.2 -0.961 6.8 167.1-117.4 118.9 2.7 6.2 22.6 77 115 A L E -A 86 0A 56 9,-2.8 9,-2.6 -2,-0.5 3,-0.1 -0.891 26.8-129.4-127.6 154.6 4.2 8.8 24.8 78 116 A A - 0 0 0 -2,-0.3 7,-0.3 7,-0.3 -43,-0.1 -0.466 62.0 -30.0-104.1-178.4 2.6 11.9 26.2 79 117 A P + 0 0 46 0, 0.0 -43,-0.5 0, 0.0 -1,-0.2 0.074 66.0 164.7 -47.4 113.2 4.0 15.6 26.1 80 118 A G - 0 0 43 3,-0.8 2,-0.8 1,-0.2 -44,-0.1 0.805 62.1 -2.2 -89.3 -94.3 7.7 15.4 26.1 81 119 A T S S- 0 0 126 1,-0.1 2,-1.2 4,-0.1 -1,-0.2 -0.907 129.2 -38.3-111.8 105.3 9.4 18.5 25.2 82 120 A K S S+ 0 0 179 -2,-0.8 -1,-0.1 -3,-0.1 0, 0.0 -0.153 112.5 102.5 77.3 -33.1 7.1 21.3 24.2 83 121 A G S S- 0 0 3 -2,-1.2 -3,-0.8 1,-0.1 27,-0.3 -0.703 74.2-132.0-101.6 127.1 4.7 19.1 22.4 84 122 A P S S- 0 0 39 0, 0.0 2,-0.3 0, 0.0 26,-0.2 0.510 88.7 -0.1 -39.8 -20.8 1.3 17.9 23.8 85 123 A F - 0 0 1 24,-1.1 2,-0.3 -7,-0.3 24,-0.3 -0.979 53.8-148.5-164.9 168.4 2.2 14.3 22.8 86 124 A D E +A 77 0A 36 -9,-2.6 -9,-2.8 -2,-0.3 2,-0.4 -0.894 27.1 162.4-139.9 107.0 4.7 12.0 21.2 87 125 A L E +AB 76 107A 3 20,-0.8 20,-1.5 -2,-0.3 2,-0.3 -0.992 9.6 131.6-135.8 140.9 3.6 8.9 19.3 88 126 A Y E -AB 75 106A 51 -13,-2.9 -13,-3.2 -2,-0.4 2,-0.3 -0.954 40.0-122.7-166.5 170.1 5.4 6.7 16.8 89 127 A S E - B 0 105A 0 16,-1.9 16,-2.2 -2,-0.3 -15,-0.1 -0.927 34.8-107.9-124.3 151.2 6.3 3.3 15.7 90 128 A L - 0 0 37 -17,-0.3 6,-0.2 -2,-0.3 -18,-0.1 -0.410 38.8-105.3 -75.0 157.9 9.8 1.9 15.2 91 129 A G > - 0 0 2 4,-1.9 3,-2.3 11,-0.4 11,-0.3 -0.177 40.4 -86.8 -76.9 179.2 11.1 1.2 11.7 92 130 A A T 3 S+ 0 0 35 9,-3.3 10,-0.2 1,-0.3 -1,-0.1 0.728 128.8 53.1 -58.8 -25.4 11.6 -2.1 10.0 93 131 A D T 3 S- 0 0 114 8,-0.2 -1,-0.3 2,-0.2 3,-0.1 0.407 118.8-109.4 -94.8 3.4 15.0 -2.5 11.5 94 132 A G S < S+ 0 0 51 -3,-2.3 2,-0.3 1,-0.3 -2,-0.1 0.842 82.5 111.5 73.8 34.7 13.7 -1.9 15.0 95 133 A K - 0 0 124 7,-0.1 -4,-1.9 -4,-0.1 2,-0.8 -0.968 69.8-124.6-140.0 147.9 15.3 1.4 15.3 96 134 A E + 0 0 114 -2,-0.3 2,-0.2 -6,-0.2 7,-0.1 -0.866 62.1 116.8 -93.5 105.8 14.3 5.0 15.5 97 135 A G - 0 0 29 -2,-0.8 7,-2.0 5,-0.3 2,-0.5 -0.822 68.1 -82.2-150.1-173.2 16.1 6.8 12.7 98 136 A G S S+ 0 0 73 -2,-0.2 2,-0.3 5,-0.2 3,-0.1 -0.953 74.1 98.4-110.4 127.0 15.6 8.7 9.5 99 137 A S S S- 0 0 73 -2,-0.5 -2,-0.0 1,-0.2 4,-0.0 -0.875 78.5 -89.2 179.2-176.8 15.1 6.5 6.4 100 138 A D S S- 0 0 101 -2,-0.3 3,-0.3 2,-0.1 -1,-0.2 0.912 116.1 -2.4 -81.2 -71.9 12.1 5.3 4.4 101 139 A N S S+ 0 0 34 1,-0.2 -9,-3.3 -97,-0.1 -8,-0.2 0.502 134.2 60.6 -99.0 -6.1 11.1 2.1 6.0 102 140 A D S S+ 0 0 60 -11,-0.3 -11,-0.4 -10,-0.2 -5,-0.3 0.279 88.3 100.4-100.6 7.9 13.9 2.2 8.6 103 141 A A S S- 0 0 11 -3,-0.3 2,-0.5 -7,-0.1 -5,-0.2 -0.541 85.0-105.8 -89.5 156.6 12.6 5.4 10.0 104 142 A D - 0 0 51 -7,-2.0 2,-0.7 -2,-0.2 -14,-0.2 -0.725 39.8-152.5 -79.2 129.0 10.6 5.8 13.1 105 143 A I E +B 89 0A 9 -16,-2.2 -16,-1.9 -2,-0.5 2,-0.3 -0.927 39.5 103.9-114.2 113.8 7.2 6.6 11.8 106 144 A G E -B 88 0A 18 -2,-0.7 2,-0.3 -18,-0.3 -18,-0.3 -0.969 44.7-135.7-168.0-179.7 4.9 8.6 13.9 107 145 A N E +B 87 0A 23 -20,-1.5 -20,-0.8 -2,-0.3 2,-0.3 -0.981 17.8 168.5-151.5 156.2 3.4 11.9 14.4 108 146 A W - 0 0 112 -2,-0.3 2,-0.4 -22,-0.2 -22,-0.1 -0.918 28.6-112.4-155.7 177.2 2.6 14.2 17.2 109 147 A D 0 0 77 -2,-0.3 -24,-1.1 -24,-0.3 -2,-0.0 -0.988 360.0 360.0-129.9 136.4 1.5 17.7 17.8 110 148 A N 0 0 152 -2,-0.4 -1,-0.1 -27,-0.3 -28,-0.1 0.277 360.0 360.0-138.3 360.0 3.4 20.6 19.2