==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=14-APR-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SPLICING/RNA 27-MAR-09 2KH9 . COMPND 2 MOLECULE: U4/U6 SNRNA-ASSOCIATED-SPLICING FACTOR PRP24; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR S.A.MARTIN-TUMASZ,S.E.BUTCHER . 86 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5437.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 57 66.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 18 20.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 11.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 4.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 16 18.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 4 4.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 114 A M 0 0 122 0, 0.0 54,-0.1 0, 0.0 83,-0.1 0.000 360.0 360.0 360.0 21.8 -11.3 -7.9 8.8 2 115 A T + 0 0 99 53,-0.0 2,-0.1 52,-0.0 53,-0.1 0.376 360.0 58.6-140.7 -7.5 -8.8 -10.7 8.2 3 116 A E + 0 0 16 51,-0.2 3,-0.1 77,-0.1 55,-0.1 -0.124 43.6 167.7-105.4-155.3 -6.2 -9.0 5.9 4 117 A C + 0 0 34 1,-0.2 48,-1.8 -2,-0.1 2,-0.6 0.206 45.1 103.6 160.5 -13.0 -4.0 -5.9 6.5 5 118 A T E -A 51 0A 49 46,-0.2 75,-0.9 49,-0.1 46,-0.2 -0.839 49.2-161.6-104.6 120.9 -1.4 -5.8 3.8 6 119 A L E -AB 50 79A 1 44,-2.8 44,-2.1 -2,-0.6 2,-0.5 -0.591 10.1-140.9 -94.5 158.7 -1.7 -3.4 0.8 7 120 A W E -AB 49 78A 105 71,-3.4 71,-2.7 42,-0.2 2,-0.4 -0.987 14.6-166.0-121.3 125.6 0.1 -3.5 -2.6 8 121 A M E +AB 48 77A 0 40,-3.2 40,-2.8 -2,-0.5 2,-0.3 -0.952 13.9 172.3-114.5 129.2 1.3 -0.2 -4.1 9 122 A T E + B 0 76A 34 67,-0.6 67,-2.4 -2,-0.4 37,-0.0 -0.978 44.3 11.1-141.6 154.5 2.3 -0.1 -7.8 10 123 A N S S+ 0 0 76 -2,-0.3 66,-0.5 65,-0.2 -1,-0.3 0.921 77.3 123.8 43.5 110.3 3.3 2.5 -10.5 11 124 A F - 0 0 6 64,-0.1 -1,-0.2 -3,-0.1 35,-0.2 -0.860 65.8 -92.6 172.0 138.6 3.9 5.8 -8.9 12 125 A P > - 0 0 2 0, 0.0 3,-1.4 0, 0.0 59,-0.0 -0.368 49.8-104.3 -60.1 151.1 6.7 8.4 -8.7 13 126 A P T 3 S+ 0 0 62 0, 0.0 30,-0.0 0, 0.0 0, 0.0 0.279 94.7 111.2 -68.2 13.1 8.9 7.8 -5.6 14 127 A S T 3 S+ 0 0 76 1,-0.1 2,-0.7 5,-0.0 5,-0.1 0.912 75.6 64.6 -46.2 -39.8 7.2 10.8 -3.9 15 128 A Y S < S+ 0 0 45 -3,-1.4 2,-0.2 4,-0.1 -1,-0.1 -0.780 75.3 158.3 -87.2 115.7 5.9 7.9 -1.9 16 129 A T > - 0 0 56 -2,-0.7 4,-2.9 1,-0.0 5,-0.4 -0.611 57.9 -79.3-125.5-172.6 8.8 6.3 -0.2 17 130 A Q H > S+ 0 0 107 1,-0.2 4,-1.4 -2,-0.2 5,-0.1 0.946 129.8 35.9 -60.9 -51.5 9.1 4.1 2.9 18 131 A R H > S+ 0 0 137 2,-0.2 4,-1.8 1,-0.2 -1,-0.2 0.846 121.4 45.9 -70.6 -33.0 8.8 6.9 5.4 19 132 A N H > S+ 0 0 59 2,-0.2 4,-3.5 1,-0.2 5,-0.3 0.901 112.8 48.4 -79.7 -39.2 6.3 9.0 3.4 20 133 A I H X S+ 0 0 2 -4,-2.9 4,-2.4 1,-0.2 -1,-0.2 0.878 115.7 47.6 -63.3 -32.7 4.1 6.1 2.6 21 134 A R H X S+ 0 0 88 -4,-1.4 4,-2.9 -5,-0.4 10,-0.5 0.820 112.2 47.7 -77.7 -34.3 4.3 5.3 6.3 22 135 A D H X>S+ 0 0 65 -4,-1.8 4,-2.2 2,-0.2 5,-0.7 0.937 116.6 43.7 -70.7 -46.5 3.6 8.8 7.3 23 136 A L H X>S+ 0 0 24 -4,-3.5 5,-1.2 1,-0.2 4,-1.0 0.913 119.7 44.6 -61.2 -42.2 0.7 8.9 4.9 24 137 A L H <5S+ 0 0 0 -4,-2.4 -2,-0.2 -5,-0.3 -1,-0.2 0.842 116.6 43.3 -73.7 -39.8 -0.3 5.5 6.1 25 138 A Q H <>S+ 0 0 64 -4,-2.9 5,-1.1 3,-0.3 -1,-0.2 0.737 128.5 25.9 -79.2 -24.5 0.1 6.1 9.8 26 139 A D H <5S+ 0 0 126 -4,-2.2 -3,-0.2 3,-0.2 -2,-0.2 0.821 133.3 33.5-105.3 -50.7 -1.6 9.5 9.9 27 140 A I T < S+ 0 0 55 -2,-0.3 3,-0.6 -3,-0.1 2,-0.4 0.268 96.3 121.1 -71.3 17.5 14.4 3.2 -9.0 44 157 A S T 3 S+ 0 0 61 1,-0.2 -5,-0.6 2,-0.1 -2,-0.3 -0.676 71.9 10.9 -91.4 133.8 12.7 1.0 -11.6 45 158 A R T 3 S- 0 0 162 -2,-0.4 2,-0.3 -7,-0.1 -1,-0.2 0.899 74.6-170.0 68.5 47.4 9.4 -0.8 -10.8 46 159 A R < + 0 0 68 -3,-0.6 -1,-0.1 -35,-0.2 -2,-0.1 0.319 28.3 147.4 -51.1 0.2 9.0 1.1 -7.6 47 160 A F - 0 0 32 -2,-0.3 -9,-1.0 -11,-0.1 2,-0.3 -0.045 23.2-178.3 -44.3 145.1 6.1 -1.1 -6.4 48 161 A A E -A 8 0A 5 -40,-2.8 -40,-3.2 -12,-0.2 2,-0.4 -0.822 24.7-135.1-139.4 174.5 5.7 -1.7 -2.6 49 162 A Y E -AC 7 35A 84 -14,-2.2 -14,-4.0 -42,-0.3 2,-0.4 -0.996 20.6-161.8-134.7 133.9 3.7 -3.6 -0.1 50 163 A I E -AC 6 34A 1 -44,-2.1 -44,-2.8 -2,-0.4 2,-0.4 -0.943 7.0-146.1-123.6 148.4 2.6 -1.9 3.1 51 164 A D E -A 5 0A 22 -18,-1.3 -19,-1.0 -2,-0.4 -18,-0.5 -0.901 16.7-171.1-112.6 137.7 1.4 -3.5 6.4 52 165 A V E - C 0 31A 1 -48,-1.8 -21,-0.2 -2,-0.4 -22,-0.1 -0.796 35.6-102.9-125.0 169.6 -1.3 -1.9 8.5 53 166 A T S S- 0 0 67 -23,-0.7 -23,-0.1 -24,-0.5 -22,-0.1 0.838 93.7 -36.5 -64.9 -33.0 -2.7 -2.6 12.0 54 167 A S S S- 0 0 68 -50,-0.1 -51,-0.2 -3,-0.0 -49,-0.1 0.456 87.3 -81.3-158.8 -53.1 -6.0 -4.3 11.0 55 168 A K S >>S+ 0 0 2 -51,-0.1 4,-3.7 -54,-0.1 5,-0.5 0.057 107.1 84.2 162.9 -38.9 -7.8 -3.1 7.9 56 169 A E H >5S+ 0 0 93 1,-0.2 4,-0.6 2,-0.2 -27,-0.0 0.926 109.2 40.1 -50.1 -38.5 -9.9 0.0 8.6 57 170 A D H >5S+ 0 0 15 2,-0.2 4,-2.3 3,-0.2 -1,-0.2 0.921 118.9 42.7 -70.9 -56.3 -6.5 1.6 8.0 58 171 A A H >5S+ 0 0 0 1,-0.2 4,-1.9 2,-0.2 5,-0.3 0.964 114.8 50.2 -59.7 -55.1 -5.4 -0.6 5.0 59 172 A R H X5S+ 0 0 79 -4,-3.7 4,-1.3 1,-0.2 -1,-0.2 0.817 110.6 54.5 -49.5 -31.1 -8.9 -0.4 3.4 60 173 A Y H X< S+ 0 0 13 -4,-2.2 3,-1.3 3,-0.0 10,-0.2 0.606 88.2 112.7-104.3 -11.8 -4.5 6.8 -3.4 66 179 A N T 3< S+ 0 0 85 -4,-1.8 10,-0.2 -5,-0.4 12,-0.0 -0.412 84.3 19.0 -67.6 132.1 -6.0 4.3 -5.9 67 180 A G T 3 S+ 0 0 27 8,-2.5 2,-0.5 1,-0.3 -1,-0.2 0.683 87.0 149.9 85.6 20.4 -6.6 5.9 -9.3 68 181 A L < - 0 0 68 -3,-1.3 7,-3.1 7,-0.3 2,-0.9 -0.752 38.6-150.9 -92.3 126.7 -4.3 8.8 -8.8 69 182 A K E +D 74 0B 145 -2,-0.5 2,-0.6 5,-0.3 5,-0.3 -0.835 25.2 174.1 -97.5 102.5 -2.6 10.2 -11.8 70 183 A I E > -D 73 0B 33 3,-3.1 3,-1.4 -2,-0.9 -2,-0.0 -0.945 67.4 -18.8-120.2 115.3 0.6 11.6 -10.5 71 184 A E T 3 S- 0 0 155 -2,-0.6 -1,-0.2 1,-0.3 3,-0.1 0.664 132.5 -48.5 66.1 17.1 3.2 13.0 -12.9 72 185 A G T 3 S+ 0 0 73 1,-0.3 2,-0.4 0, 0.0 -1,-0.3 0.451 117.8 107.2 103.7 2.3 1.5 11.1 -15.7 73 186 A Y E < -D 70 0B 102 -3,-1.4 -3,-3.1 -63,-0.0 2,-0.6 -0.936 63.3-134.2-117.8 137.6 1.2 7.7 -13.9 74 187 A T E -D 69 0B 64 -2,-0.4 -5,-0.3 -5,-0.3 2,-0.2 -0.790 27.1-128.6 -90.0 123.3 -2.0 6.1 -12.5 75 188 A L - 0 0 3 -7,-3.1 -8,-2.5 -2,-0.6 2,-0.6 -0.477 11.1-156.0 -76.4 138.3 -1.4 4.7 -9.1 76 189 A V E +B 9 0A 74 -67,-2.4 -67,-0.6 -66,-0.5 2,-0.6 -0.678 25.0 166.3-111.8 68.9 -2.5 1.1 -8.3 77 190 A T E +B 8 0A 1 -2,-0.6 2,-0.3 -69,-0.2 -69,-0.2 -0.811 12.0 161.0 -87.0 121.6 -3.0 1.2 -4.6 78 191 A K E -B 7 0A 96 -71,-2.7 -71,-3.4 -2,-0.6 2,-0.2 -0.963 31.8-131.1-140.3 154.8 -4.8 -1.9 -3.5 79 192 A V E -B 6 0A 11 -2,-0.3 -73,-0.2 -73,-0.3 -20,-0.0 -0.616 45.0 -74.0-101.8 168.6 -5.4 -3.9 -0.3 80 193 A S S S- 0 0 9 -75,-0.9 -1,-0.2 -2,-0.2 -77,-0.1 0.048 74.2 -60.6 -54.2 166.2 -5.0 -7.6 0.2 81 194 A N - 0 0 117 1,-0.1 2,-0.2 -3,-0.1 -1,-0.2 -0.300 69.8-102.2 -51.5 124.3 -7.5 -10.1 -1.1 82 195 A P + 0 0 68 0, 0.0 3,-0.2 0, 0.0 -1,-0.1 -0.317 45.3 170.9 -60.0 118.5 -10.9 -9.2 0.6 83 196 A L + 0 0 101 -2,-0.2 -2,-0.1 1,-0.1 -3,-0.0 -0.138 65.3 79.4-118.0 31.9 -11.6 -11.6 3.4 84 197 A E + 0 0 70 -83,-0.1 -1,-0.1 2,-0.1 0, 0.0 -0.109 62.0 100.9-126.0 28.7 -14.5 -9.6 4.7 85 198 A L 0 0 151 -3,-0.2 -2,-0.1 0, 0.0 -1,-0.0 0.942 360.0 360.0 -78.4 -55.3 -16.9 -10.9 2.1 86 199 A E 0 0 229 0, 0.0 -2,-0.1 0, 0.0 -3,-0.1 0.411 360.0 360.0-144.7 360.0 -18.8 -13.4 4.2