==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIMICROBIAL PROTEIN 03-APR-09 2KHF . COMPND 2 MOLECULE: PLNJ; . SOURCE 2 ORGANISM_SCIENTIFIC: LACTOBACILLUS PLANTARUM; . AUTHOR P.ROGNE,C.HAUGEN,P.E.KRISTIANSEN,J.NISSEN-MEYER . 25 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2755.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 21 84.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 28.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 12 48.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 8.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 105 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 117.1 2.1 0.0 -1.2 2 2 A A >> + 0 0 61 0, 0.0 4,-1.8 0, 0.0 3,-0.6 0.171 360.0 88.0-178.3 -34.8 1.1 2.3 -4.1 3 3 A W H 3> S+ 0 0 170 1,-0.2 4,-1.9 2,-0.2 5,-0.1 0.827 86.3 64.1 -51.4 -33.6 3.2 5.4 -4.0 4 4 A K H 3> S+ 0 0 110 1,-0.2 4,-1.4 2,-0.2 3,-0.4 0.950 106.2 39.9 -56.3 -53.4 5.7 3.5 -6.1 5 5 A N H <> S+ 0 0 109 -3,-0.6 4,-1.8 1,-0.2 -1,-0.2 0.791 112.1 59.2 -67.2 -27.9 3.3 3.3 -9.1 6 6 A F H X S+ 0 0 133 -4,-1.8 4,-0.6 2,-0.2 -1,-0.2 0.826 100.9 55.8 -70.0 -32.3 2.2 6.9 -8.3 7 7 A W H >X S+ 0 0 162 -4,-1.9 3,-1.1 -3,-0.4 4,-1.0 0.962 113.0 38.1 -64.5 -53.8 5.7 8.1 -8.8 8 8 A S H 3X S+ 0 0 35 -4,-1.4 4,-1.7 1,-0.3 -1,-0.2 0.824 104.8 70.4 -67.2 -31.9 6.2 6.7 -12.3 9 9 A S H 3< S+ 0 0 63 -4,-1.8 4,-0.3 1,-0.2 -1,-0.3 0.750 98.0 53.4 -57.1 -23.4 2.5 7.6 -13.1 10 10 A L H XX S+ 0 0 73 -3,-1.1 3,-1.9 -4,-0.6 4,-0.8 0.950 105.5 48.0 -76.9 -53.2 3.7 11.2 -13.1 11 11 A R H 3X S+ 0 0 126 -4,-1.0 4,-2.5 1,-0.3 5,-0.3 0.755 93.4 81.8 -59.5 -23.9 6.6 10.9 -15.6 12 12 A K H 3< S+ 0 0 136 -4,-1.7 4,-0.3 1,-0.3 -1,-0.3 0.808 98.1 40.5 -51.7 -30.9 4.1 9.0 -17.8 13 13 A G H <4>S+ 0 0 32 -3,-1.9 5,-0.9 -4,-0.3 3,-0.4 0.786 111.0 55.0 -88.8 -30.8 2.9 12.5 -18.9 14 14 A F H ><>S+ 0 0 116 -4,-0.8 5,-2.3 1,-0.2 3,-0.9 0.786 100.7 61.0 -72.1 -27.8 6.3 14.1 -19.1 15 15 A Y T 3<5S+ 0 0 194 -4,-2.5 -1,-0.2 1,-0.2 -2,-0.2 0.776 90.1 69.8 -69.5 -26.6 7.5 11.4 -21.5 16 16 A D T 3 5S- 0 0 143 -3,-0.4 -1,-0.2 -4,-0.3 -2,-0.2 0.772 133.3 -81.0 -62.1 -25.8 4.8 12.4 -23.9 17 17 A G T X>5S+ 0 0 32 -3,-0.9 4,-3.3 -4,-0.4 3,-2.3 0.146 108.5 105.9 145.9 -20.5 6.7 15.6 -24.5 18 18 A E H 3>< + 0 0 98 -5,-0.9 4,-0.9 1,-0.3 5,-0.3 0.759 67.6 79.0 -57.3 -24.4 5.8 17.9 -21.6 19 19 A A H 34>S+ 0 0 30 -3,-2.3 4,-0.9 -6,-0.2 3,-0.9 0.629 124.5 64.8-127.8 -41.1 10.5 19.7 -22.7 21 21 A R H ><5S+ 0 0 183 -4,-3.3 3,-1.0 1,-0.3 -3,-0.2 0.902 105.8 48.7 -53.8 -44.6 7.6 21.2 -24.5 22 22 A A T 3<5S+ 0 0 41 -4,-0.9 -1,-0.3 -5,-0.3 -3,-0.1 0.720 102.9 63.9 -68.6 -21.0 6.4 22.7 -21.1 23 23 A I T <45S- 0 0 111 -3,-0.9 -1,-0.2 -5,-0.3 -2,-0.2 0.722 89.7-151.4 -74.8 -21.7 10.0 24.0 -20.6 24 24 A R T <<5 0 0 182 -3,-1.0 -3,-0.1 -4,-0.9 -2,-0.1 0.769 360.0 360.0 54.9 25.7 9.6 26.2 -23.7 25 25 A R < 0 0 249 -5,-0.8 -1,-0.1 0, 0.0 -4,-0.1 0.877 360.0 360.0 -64.1 360.0 13.4 25.8 -24.1