==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RIBOSOMAL PROTEIN 07-APR-09 2KHI . COMPND 2 MOLECULE: 30S RIBOSOMAL PROTEIN S1; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR P.SALAH,M.BISAGLIA,P.ALIPRANDI,M.UZAN,C.SIZUN,F.BONTEMS . 95 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7049.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 52 54.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 2.1 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 24 25.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 14 14.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 6.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 267 A W 0 0 300 0, 0.0 2,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 173.5 23.6 2.4 -8.8 2 268 A V - 0 0 104 2,-0.0 2,-1.9 1,-0.0 5,-0.0 -0.906 360.0-132.0-106.8 129.6 22.0 0.9 -5.6 3 269 A A - 0 0 67 -2,-0.4 2,-1.7 1,-0.1 -1,-0.0 -0.407 61.7 -84.0 -80.3 61.4 20.5 3.3 -2.9 4 270 A I S S+ 0 0 158 -2,-1.9 2,-0.1 2,-0.1 -1,-0.1 -0.130 120.3 14.8 65.1 -34.0 22.4 1.5 0.0 5 271 A A S S+ 0 0 4 -2,-1.7 2,-0.3 64,-0.2 66,-0.2 -0.636 87.7 143.5-164.8 94.0 19.7 -1.1 0.4 6 272 A K + 0 0 67 -2,-0.1 -2,-0.1 64,-0.1 62,-0.0 -0.997 20.3 167.4-144.9 142.9 17.3 -1.3 -2.6 7 273 A R S S+ 0 0 83 -2,-0.3 -1,-0.1 1,-0.2 63,-0.0 0.705 72.4 47.0-115.7 -54.8 15.4 -4.2 -4.4 8 274 A Y S S- 0 0 55 4,-0.1 -1,-0.2 1,-0.1 61,-0.1 -0.551 87.7-115.7 -89.1 152.9 12.8 -2.6 -6.6 9 275 A P - 0 0 93 0, 0.0 -1,-0.1 0, 0.0 -3,-0.0 0.797 55.8-113.3 -61.9 -31.3 13.6 0.5 -8.9 10 276 A E S S+ 0 0 103 2,-0.1 57,-0.2 57,-0.0 3,-0.1 0.577 99.9 50.5 93.3 119.2 11.2 2.8 -6.8 11 277 A G S S+ 0 0 41 55,-1.5 2,-0.3 1,-0.6 56,-0.1 0.554 81.8 122.3 94.7 13.1 8.0 4.1 -8.5 12 278 A T - 0 0 59 54,-0.2 54,-3.0 55,-0.1 -1,-0.6 -0.813 62.4-122.7-101.8 134.6 7.3 0.5 -9.6 13 279 A K E -A 65 0A 126 -2,-0.3 52,-0.3 52,-0.3 2,-0.2 -0.613 26.7-174.1-103.1 152.6 3.9 -0.7 -8.3 14 280 A L E -A 64 0A 31 50,-3.0 50,-3.0 -2,-0.2 2,-0.4 -0.741 21.7-126.0-126.1 174.0 2.8 -3.5 -6.1 15 281 A T E +A 63 0A 81 48,-0.3 48,-0.3 -2,-0.2 2,-0.3 -0.994 37.2 161.6-126.9 137.1 -0.5 -5.0 -4.9 16 282 A G E -A 62 0A 3 46,-1.1 46,-2.8 -2,-0.4 2,-0.4 -0.886 36.0-112.7-147.0 175.1 -1.1 -5.5 -1.2 17 283 A R E -AB 61 29A 108 12,-2.7 12,-4.0 -2,-0.3 2,-0.3 -0.936 36.5-113.3-118.0 134.8 -3.8 -6.1 1.4 18 284 A V E + B 0 28A 3 42,-3.3 41,-3.3 -2,-0.4 10,-0.2 -0.519 40.1 159.8 -78.9 133.8 -4.6 -3.5 4.0 19 285 A T E + 0 0 54 8,-2.2 2,-0.3 1,-0.3 9,-0.2 0.720 58.7 4.7-121.2 -44.2 -3.9 -4.2 7.7 20 286 A N E - B 0 27A 98 7,-1.5 7,-2.8 37,-0.1 2,-0.4 -0.919 56.8-128.6-136.3 174.8 -3.8 -0.9 9.8 21 287 A L E - B 0 26A 103 5,-0.3 5,-0.3 -2,-0.3 2,-0.2 -0.965 26.8-159.4-121.1 142.0 -4.3 2.8 9.5 22 288 A T E > - B 0 25A 52 3,-2.7 3,-0.8 -2,-0.4 5,-0.0 -0.553 37.3 -86.8-112.5 179.2 -1.7 5.4 10.7 23 289 A D T 3 S+ 0 0 151 1,-0.3 3,-0.1 -2,-0.2 -1,-0.0 0.686 124.7 3.9 -56.4 -28.9 -1.5 9.1 11.8 24 290 A Y T 3 S+ 0 0 165 14,-0.1 16,-0.9 16,-0.0 2,-0.3 -0.154 134.7 13.1-156.9 46.8 -1.0 10.2 8.1 25 291 A G E < S-BC 22 39A 6 -3,-0.8 -3,-2.7 14,-0.2 2,-0.3 -0.984 73.4 -96.8 174.8-163.5 -1.3 7.0 6.1 26 292 A C E -BC 21 38A 0 12,-2.3 12,-3.2 -2,-0.3 2,-0.5 -0.955 27.3-123.6-135.2 151.4 -2.3 3.4 6.0 27 293 A F E -BC 20 37A 67 -7,-2.8 -8,-2.2 -2,-0.3 -7,-1.5 -0.902 25.7-169.1-105.6 136.2 -0.3 0.2 6.4 28 294 A V E -BC 18 36A 0 8,-2.2 8,-3.5 -2,-0.5 2,-0.5 -0.929 14.0-137.6-119.9 134.8 -0.6 -2.3 3.6 29 295 A E E +BC 17 35A 73 -12,-4.0 -12,-2.7 -2,-0.4 6,-0.2 -0.843 21.3 176.6-100.1 128.5 0.7 -5.8 3.8 30 296 A I - 0 0 36 4,-1.5 2,-0.2 -2,-0.5 -1,-0.1 0.789 57.6 -26.0 -81.5-103.6 2.6 -7.4 0.9 31 297 A E S > S- 0 0 137 3,-0.2 3,-2.0 1,-0.1 -1,-0.4 -0.590 93.9 -57.5-107.8 169.7 4.1 -10.9 1.3 32 298 A E T 3 S+ 0 0 185 1,-0.3 -1,-0.1 -2,-0.2 3,-0.1 -0.357 128.4 7.7 -62.7 119.5 5.2 -12.6 4.5 33 299 A G T 3 S+ 0 0 47 -2,-0.2 2,-0.5 1,-0.1 -1,-0.3 0.280 114.8 95.5 89.3 -6.0 7.9 -10.5 6.4 34 300 A V < + 0 0 5 -3,-2.0 -4,-1.5 41,-0.0 2,-0.3 -0.948 48.1 158.4-116.7 113.5 7.3 -7.7 3.8 35 301 A E E -Cd 29 75A 97 39,-1.0 41,-1.3 -2,-0.5 -6,-0.2 -0.951 17.7-156.6-136.1 157.6 4.9 -4.8 4.6 36 302 A G E -C 28 0A 5 -8,-3.5 -8,-2.2 -2,-0.3 2,-0.4 -0.752 14.1-127.6-126.5 174.0 4.3 -1.3 3.4 37 303 A L E -C 27 0A 33 39,-0.5 2,-0.7 -10,-0.3 -10,-0.2 -0.992 16.4-143.6-124.5 125.0 2.9 2.1 4.3 38 304 A V E -C 26 0A 1 -12,-3.2 -12,-2.3 -2,-0.4 2,-0.6 -0.793 17.5-141.3 -88.2 110.9 0.5 4.0 2.0 39 305 A H E > -C 25 0A 79 -2,-0.7 3,-2.8 -14,-0.2 -14,-0.2 -0.708 15.0-131.5 -79.0 115.1 1.3 7.7 2.3 40 306 A V T 3 S+ 0 0 64 -16,-0.9 4,-0.3 -2,-0.6 -1,-0.1 0.629 102.9 50.3 -36.5 -37.4 -2.2 9.5 2.3 41 307 A S T 3 S+ 0 0 81 -17,-0.2 2,-2.3 1,-0.1 -1,-0.3 0.487 77.0 107.1 -87.7 -5.2 -1.2 12.1 -0.4 42 308 A E S < S+ 0 0 67 -3,-2.8 -1,-0.1 1,-0.2 23,-0.1 -0.272 92.5 25.3 -74.6 54.8 0.1 9.4 -3.0 43 309 A M S S- 0 0 61 -2,-2.3 2,-1.1 3,-0.1 -1,-0.2 0.136 81.1-148.9-176.2 -51.6 -2.9 9.8 -5.3 44 310 A D S S+ 0 0 144 -4,-0.3 2,-2.5 -3,-0.1 4,-0.3 -0.482 79.2 92.2 90.8 -56.4 -4.4 13.4 -4.7 45 311 A W + 0 0 161 -2,-1.1 2,-0.3 2,-0.1 -1,-0.1 -0.224 64.8 91.5 -67.3 50.8 -7.9 12.0 -5.5 46 312 A T S S+ 0 0 29 -2,-2.5 2,-0.2 -5,-0.0 -2,-0.1 -0.955 77.4 32.8-149.4 133.3 -8.9 11.2 -1.9 47 313 A N S > S+ 0 0 147 -2,-0.3 3,-0.5 4,-0.3 -2,-0.1 -0.667 125.6 43.8 116.0 -57.0 -10.7 13.7 0.5 48 314 A K T 3 S+ 0 0 201 -4,-0.3 -3,-0.1 -2,-0.2 3,-0.0 0.131 93.1 88.5 -95.2 16.7 -12.7 15.3 -2.4 49 315 A N T 3 S- 0 0 6 2,-0.2 2,-2.0 1,-0.1 -1,-0.2 0.414 86.6-141.3 -92.8 -5.8 -13.4 11.7 -3.7 50 316 A I < + 0 0 165 -3,-0.5 -1,-0.1 1,-0.1 -4,-0.0 -0.255 66.1 109.9 73.0 -46.0 -16.6 11.4 -1.5 51 317 A H S S- 0 0 103 -2,-2.0 2,-2.1 1,-0.1 -4,-0.3 -0.208 85.2-115.1 -56.1 137.7 -15.6 7.7 -0.8 52 318 A P S > S- 0 0 92 0, 0.0 4,-1.7 0, 0.0 -1,-0.1 -0.137 94.4 -57.5 -62.5 38.4 -14.3 6.0 2.5 53 319 A S T 4 S- 0 0 15 -2,-2.1 4,-0.0 2,-0.3 -3,-0.0 0.653 98.0 -56.2 87.4 24.8 -11.1 5.5 0.4 54 320 A K T 4 S- 0 0 38 1,-0.1 -1,-0.2 2,-0.1 28,-0.0 0.505 109.6 -52.4 72.2 22.8 -13.2 3.6 -2.2 55 321 A V T 4 S- 0 0 73 1,-0.2 2,-0.9 28,-0.0 -2,-0.3 0.906 79.5-178.3 82.3 64.8 -14.0 1.6 0.9 56 322 A V < + 0 0 14 -4,-1.7 2,-0.3 27,-0.1 -1,-0.2 -0.802 17.2 161.5 -94.6 100.4 -10.4 0.8 2.2 57 323 A N > - 0 0 89 -2,-0.9 3,-1.7 -4,-0.0 2,-0.3 -0.748 50.7 -76.5-114.0 162.9 -11.0 -1.3 5.3 58 324 A V T 3 S+ 0 0 88 -2,-0.3 -39,-0.2 1,-0.3 -38,-0.0 -0.470 121.6 24.4 -65.0 120.5 -8.8 -3.6 7.3 59 325 A G T 3 S+ 0 0 24 -41,-3.3 30,-0.3 1,-0.3 2,-0.3 0.504 93.2 129.1 91.3 13.7 -8.5 -6.9 5.3 60 326 A D < - 0 0 3 -3,-1.7 -42,-3.3 -42,-0.2 2,-0.4 -0.699 57.8-120.0 -92.8 149.2 -9.2 -5.3 1.8 61 327 A V E +A 17 0A 8 26,-1.4 23,-2.2 -2,-0.3 -44,-0.2 -0.784 41.5 157.8-100.0 134.2 -7.0 -5.8 -1.3 62 328 A V E -A 16 0A 2 -46,-2.8 -46,-1.1 -2,-0.4 2,-0.3 -0.625 37.6-111.3-134.8-178.9 -5.5 -2.7 -3.0 63 329 A E E -A 15 0A 48 -48,-0.3 18,-3.2 -2,-0.2 17,-0.4 -0.913 31.9-178.1-127.3 147.0 -2.6 -1.6 -5.3 64 330 A V E -A 14 0A 0 -50,-3.0 -50,-3.0 -2,-0.3 2,-0.4 -0.918 21.4-132.8-146.5 163.3 0.3 0.5 -4.1 65 331 A M E -A 13 0A 52 -52,-0.3 14,-3.2 -2,-0.3 -52,-0.3 -0.989 36.2-103.9-126.5 136.0 3.4 2.0 -5.7 66 332 A V E +E 78 0A 0 -54,-3.0 -55,-1.5 -2,-0.4 12,-0.3 -0.411 46.9 153.0 -73.5 132.4 6.8 1.6 -4.0 67 333 A L E +E 77 0A 34 10,-1.6 10,-0.7 -2,-0.2 11,-0.1 -0.174 56.3 21.1-123.0-136.6 8.5 4.4 -2.1 68 334 A D E - 0 0 98 8,-0.3 2,-0.4 9,-0.2 -1,-0.2 0.006 61.2-174.9 -63.2 112.4 11.1 3.8 0.7 69 335 A I E + 0 0 14 7,-0.3 2,-0.3 8,-0.1 7,-0.3 -0.798 15.7 173.3-101.7 136.8 12.9 0.5 1.0 70 336 A D E >>> -E 75 0A 27 5,-2.4 4,-3.0 -2,-0.4 3,-1.6 -0.854 10.4-169.9-139.8 102.9 15.3 -0.7 3.7 71 337 A E T 345S+ 0 0 96 -2,-0.3 -65,-0.1 1,-0.3 5,-0.1 0.615 90.1 62.7 -63.1 -18.3 16.2 -4.5 3.2 72 338 A E T 345S+ 0 0 146 3,-0.1 -1,-0.3 -67,-0.1 -3,-0.0 0.658 118.1 22.7 -76.3 -32.7 17.8 -4.2 6.6 73 339 A R T <45S- 0 0 173 -3,-1.6 -2,-0.2 2,-0.2 3,-0.1 0.650 102.8-124.8-108.9 -31.6 14.4 -3.4 8.3 74 340 A R T <5 + 0 0 117 -4,-3.0 -39,-1.0 1,-0.3 2,-0.4 0.853 62.6 136.0 74.9 50.5 12.1 -5.0 5.7 75 341 A R E < +dE 35 70A 71 -5,-1.2 -5,-2.4 -41,-0.1 2,-0.4 -0.991 28.6 179.6-124.8 125.5 10.0 -1.9 5.1 76 342 A I E - 0 0 1 -41,-1.3 2,-1.3 -2,-0.4 -39,-0.5 -0.961 28.4-136.5-119.9 130.0 9.2 -0.9 1.5 77 343 A S E + E 0 67A 11 -10,-0.7 -10,-1.6 -2,-0.4 2,-0.5 -0.658 34.1 175.3-102.3 92.5 7.1 2.3 1.7 78 344 A L E + E 0 66A 0 -2,-1.3 2,-0.4 -12,-0.3 -12,-0.3 -0.765 6.5 171.3-103.8 136.3 4.4 1.5 -0.9 79 345 A G + 0 0 0 -14,-3.2 -15,-0.2 -2,-0.5 -41,-0.1 -0.974 27.4 112.8-147.7 123.1 1.4 3.8 -1.5 80 346 A L - 0 0 33 -17,-0.4 -16,-0.3 -2,-0.4 -65,-0.1 0.145 34.8-171.4-138.9 -90.1 -1.3 3.7 -4.2 81 347 A K + 0 0 25 -18,-3.2 -17,-0.1 -38,-0.1 -25,-0.1 0.650 37.3 127.0 101.3 24.0 -4.8 3.0 -2.7 82 348 A Q - 0 0 92 -19,-0.4 -20,-0.1 1,-0.1 2,-0.1 0.891 59.5-135.5 -69.4 -47.7 -7.3 2.4 -5.6 83 349 A C - 0 0 25 -20,-0.2 -21,-0.3 -23,-0.0 2,-0.2 0.003 11.2 -87.7 95.3 164.9 -8.7 -1.0 -4.5 84 350 A K - 0 0 121 -23,-2.2 2,-0.9 -2,-0.1 4,-0.1 -0.484 39.7-100.2 -92.8 164.2 -9.5 -4.3 -6.2 85 351 A A S S+ 0 0 95 1,-0.3 -2,-0.0 -2,-0.2 -1,-0.0 -0.814 118.9 10.9 -94.5 99.3 -12.8 -5.5 -7.9 86 352 A N S S+ 0 0 121 -2,-0.9 -1,-0.3 -25,-0.1 -25,-0.0 0.829 82.6 173.8 91.4 64.4 -14.3 -7.6 -5.1 87 353 A P + 0 0 33 0, 0.0 -26,-1.4 0, 0.0 2,-0.4 0.694 60.4 61.2 -78.7 -16.4 -11.7 -6.3 -2.4 88 354 A W + 0 0 155 -28,-0.2 2,-0.2 -4,-0.1 -28,-0.1 -0.905 63.9 163.8-110.7 136.5 -13.5 -8.2 0.5 89 355 A Q - 0 0 95 -2,-0.4 2,-1.8 -30,-0.3 -3,-0.0 -0.811 54.4 -68.5-141.1 176.7 -13.9 -12.0 0.6 90 356 A Q - 0 0 173 -2,-0.2 2,-1.8 1,-0.1 -2,-0.0 -0.425 51.7-171.2 -79.2 68.3 -14.7 -14.7 3.2 91 357 A F + 0 0 98 -2,-1.8 2,-0.3 -32,-0.1 -1,-0.1 -0.379 35.6 122.2 -64.1 71.8 -11.5 -14.4 5.4 92 358 A A - 0 0 57 -2,-1.8 2,-0.3 3,-0.0 3,-0.0 -0.979 33.2-177.9-133.4 143.7 -11.9 -17.5 7.8 93 359 A E + 0 0 148 -2,-0.3 -2,-0.0 1,-0.1 0, 0.0 -0.891 45.0 99.1-152.3 115.8 -9.4 -20.3 8.2 94 360 A T 0 0 137 -2,-0.3 -1,-0.1 0, 0.0 0, 0.0 -0.173 360.0 360.0 169.5 62.7 -9.8 -23.4 10.4 95 361 A H 0 0 198 -3,-0.0 -3,-0.0 0, 0.0 0, 0.0 -0.862 360.0 360.0-132.8 360.0 -11.0 -25.8 7.7