==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 08-APR-09 2KHL . COMPND 2 MOLECULE: CHROMOSOMAL PROTEIN MC1; . SOURCE 2 ORGANISM_SCIENTIFIC: METHANOSARCINA THERMOPHILA; . AUTHOR F.PAQUET,H.MEUDAL,F.CULARD,G.LANCELOT . 93 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6526.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 55 59.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 28 30.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 13 14.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 4.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 6 6.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A S 0 0 171 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -12.3 -3.2 21.3 0.3 2 2 A N - 0 0 151 20,-0.0 2,-0.4 2,-0.0 0, 0.0 -0.607 360.0-156.2 -91.0 149.0 -5.6 18.5 1.2 3 3 A T - 0 0 70 -2,-0.2 2,-0.3 20,-0.0 19,-0.2 -0.993 24.5-121.1-121.6 130.2 -4.6 14.8 1.4 4 4 A R E -A 21 0A 132 17,-0.6 17,-1.0 -2,-0.4 2,-0.1 -0.556 20.5-135.6 -82.9 133.3 -7.4 12.3 1.0 5 5 A N E -A 20 0A 74 -2,-0.3 45,-1.8 15,-0.2 15,-0.3 -0.439 20.7-169.4 -78.5 155.2 -8.2 9.8 3.7 6 6 A F E -AB 19 49A 0 13,-3.3 13,-1.2 43,-0.2 2,-0.4 -0.790 14.3-130.4-134.6 176.2 -8.9 6.2 3.0 7 7 A V E -AB 18 48A 6 41,-1.0 41,-0.9 -2,-0.3 2,-0.6 -0.980 18.3-125.7-134.5 146.5 -10.1 3.2 5.0 8 8 A L E - B 0 47A 22 9,-1.1 8,-1.0 -2,-0.4 39,-0.2 -0.827 21.9-152.5 -99.4 120.7 -8.6 -0.2 5.3 9 9 A R E -AB 15 46A 45 37,-2.7 37,-0.7 -2,-0.6 6,-0.3 -0.555 8.8-144.9 -88.7 157.2 -10.8 -3.1 4.5 10 10 A D - 0 0 65 4,-1.8 -1,-0.1 -2,-0.2 6,-0.1 0.036 41.9 -71.9-102.4-151.8 -10.4 -6.5 6.0 11 11 A E S S+ 0 0 162 1,-0.2 -2,-0.0 2,-0.1 34,-0.0 0.716 133.5 38.5 -83.5 -20.4 -10.9 -10.1 4.7 12 12 A D S S- 0 0 128 3,-0.0 -1,-0.2 0, 0.0 3,-0.1 0.517 128.0 -90.9-103.3 -6.9 -14.7 -9.8 4.7 13 13 A G S S+ 0 0 5 1,-0.2 -2,-0.1 33,-0.0 0, 0.0 0.326 82.5 146.5 102.5 -3.9 -14.8 -6.2 3.5 14 14 A N - 0 0 81 -5,-0.1 -4,-1.8 1,-0.1 2,-0.3 0.069 43.3-112.0 -54.6 178.3 -14.8 -5.1 7.2 15 15 A E E +A 9 0A 105 -6,-0.3 -6,-0.2 -3,-0.1 2,-0.2 -0.793 30.7 175.5-130.4 160.2 -13.1 -1.8 8.1 16 16 A H E - 0 0 95 -8,-1.0 -8,-0.1 1,-0.3 3,-0.1 -0.520 45.3 -20.9-142.6-159.6 -10.0 -0.6 9.9 17 17 A G E - 0 0 46 -2,-0.2 -9,-1.1 1,-0.1 2,-0.8 -0.011 69.6 -96.8 -59.7 161.2 -8.1 2.6 10.8 18 18 A V E -A 7 0A 87 -11,-0.2 -11,-0.2 -3,-0.1 -1,-0.1 -0.713 44.7-171.4 -84.3 110.9 -8.3 5.7 8.7 19 19 A F E -A 6 0A 22 -13,-1.2 -13,-3.3 -2,-0.8 2,-0.3 -0.413 2.8-163.1 -88.7 174.0 -5.4 5.8 6.3 20 20 A T E +A 5 0A 65 -15,-0.3 -15,-0.2 -2,-0.1 10,-0.2 -0.898 18.5 148.0-148.2 175.3 -4.5 8.8 4.1 21 21 A G E -A 4 0A 6 -17,-1.0 -17,-0.6 -2,-0.3 -2,-0.0 -0.512 53.5-112.2 154.7 142.9 -2.5 9.9 1.1 22 22 A K S S+ 0 0 142 -19,-0.2 -1,-0.1 -2,-0.2 -17,-0.1 0.665 113.0 21.7 -63.1 -14.4 -2.5 12.3 -1.8 23 23 A Q S >> S- 0 0 95 -19,-0.1 3,-3.1 -3,-0.1 4,-0.7 -0.978 89.1-110.2-153.8 142.9 -3.0 9.2 -3.8 24 24 A P H 3> S+ 0 0 17 0, 0.0 4,-1.1 0, 0.0 5,-0.1 0.615 113.0 68.2 -47.0 -18.7 -4.4 5.7 -3.0 25 25 A R H 3> S+ 0 0 118 2,-0.2 4,-1.3 3,-0.2 6,-0.2 0.626 96.5 54.5 -82.8 -12.7 -1.0 4.2 -3.5 26 26 A Q H <> S+ 0 0 80 -3,-3.1 4,-3.2 2,-0.2 5,-0.3 0.951 106.8 47.1 -77.4 -65.0 0.2 6.0 -0.4 27 27 A A H < S+ 0 0 0 -4,-0.7 -2,-0.2 1,-0.2 -1,-0.1 0.810 117.3 48.3 -34.5 -37.5 -2.6 4.6 1.8 28 28 A A H >X S+ 0 0 0 -4,-1.1 4,-1.2 -5,-0.3 3,-1.0 0.844 107.0 52.8 -77.3 -39.0 -1.4 1.4 0.1 29 29 A L H 3X S+ 0 0 44 -4,-1.3 4,-1.7 1,-0.3 3,-0.2 0.892 112.1 46.0 -63.2 -39.2 2.3 2.1 0.8 30 30 A K H 3< S+ 0 0 118 -4,-3.2 -1,-0.3 1,-0.2 -2,-0.2 0.340 110.3 56.4 -80.9 -1.0 1.3 2.5 4.4 31 31 A A H X4 S+ 0 0 0 -3,-1.0 3,-0.6 -5,-0.3 4,-0.4 0.558 102.7 53.8 -99.1 -20.3 -0.7 -0.6 3.9 32 32 A A H >< S+ 0 0 0 -4,-1.2 3,-1.0 -3,-0.2 2,-0.6 0.975 102.9 54.5 -72.8 -66.3 2.4 -2.5 2.8 33 33 A N T 3< S+ 0 0 68 -4,-1.7 -1,-0.2 1,-0.2 -3,-0.1 0.256 91.9 91.1 -35.1 8.1 4.4 -1.5 5.9 34 34 A R T < S- 0 0 158 -3,-0.6 -1,-0.2 -2,-0.6 -2,-0.2 0.944 101.6 -70.2 -91.4 -48.3 1.4 -3.1 7.8 35 35 A G S < S+ 0 0 49 -3,-1.0 2,-0.8 -4,-0.4 -3,-0.1 0.008 111.9 43.3-164.5 -81.3 2.3 -6.7 8.3 36 36 A S + 0 0 73 8,-0.1 2,-1.6 1,-0.1 7,-0.2 -0.043 65.6 153.8 -87.3 36.9 2.6 -9.6 5.8 37 37 A G + 0 0 7 -2,-0.8 25,-0.8 -5,-0.4 2,-0.3 -0.495 17.7 143.1 -72.7 92.7 4.4 -7.5 3.3 38 38 A T - 0 0 57 -2,-1.6 3,-0.3 22,-0.4 25,-0.1 -0.970 54.3-138.6-133.7 144.1 6.3 -10.1 1.4 39 39 A K S S+ 0 0 132 23,-0.4 24,-0.1 -2,-0.3 -1,-0.1 0.636 105.2 62.3 -81.4 -12.8 7.1 -10.3 -2.3 40 40 A A S S- 0 0 94 1,-0.2 -1,-0.2 -3,-0.0 -3,-0.1 0.838 134.3 -5.7 -73.7 -34.6 6.3 -14.0 -2.2 41 41 A N S S- 0 0 109 -3,-0.3 -3,-0.2 -5,-0.2 -1,-0.2 -0.506 85.1-140.4-163.9 81.1 2.8 -13.2 -1.2 42 42 A P - 0 0 19 0, 0.0 2,-0.8 0, 0.0 19,-0.3 -0.073 33.0 -95.7 -51.8 140.1 2.1 -9.5 -0.6 43 43 A D E - C 0 60A 40 17,-2.0 17,-1.3 -7,-0.2 2,-0.1 -0.458 45.0-129.8 -57.3 99.3 -0.2 -8.5 2.3 44 44 A I E - C 0 59A 63 -2,-0.8 2,-0.4 15,-0.2 15,-0.2 -0.407 35.1-176.0 -54.9 126.5 -3.4 -8.1 0.4 45 45 A I E - C 0 58A 7 13,-1.4 13,-0.9 -2,-0.1 2,-0.5 -0.972 18.9-152.6-135.3 140.9 -4.8 -4.8 1.4 46 46 A R E -BC 9 57A 47 -37,-0.7 -37,-2.7 -2,-0.4 2,-0.3 -0.969 10.9-168.5-117.3 124.8 -8.0 -3.0 0.5 47 47 A L E -B 8 0A 0 9,-3.4 2,-0.4 -2,-0.5 9,-0.3 -0.741 4.6-158.8-106.2 158.1 -8.2 0.7 0.5 48 48 A R E -B 7 0A 34 -41,-0.9 -41,-1.0 -2,-0.3 2,-0.2 -0.954 17.7-129.8-142.5 115.7 -11.4 2.6 0.3 49 49 A E E -B 6 0A 11 5,-1.0 -43,-0.2 -2,-0.4 5,-0.2 -0.470 5.2-147.3 -69.3 130.7 -11.6 6.2 -0.9 50 50 A R S S+ 0 0 144 -45,-1.8 -1,-0.2 -2,-0.2 -44,-0.1 0.371 101.9 40.9 -77.8 8.0 -13.5 8.3 1.5 51 51 A G S S+ 0 0 68 1,-0.3 2,-0.3 -46,-0.2 -1,-0.1 0.711 114.1 41.2-112.8 -64.4 -14.4 10.2 -1.6 52 52 A T S S- 0 0 53 2,-0.1 2,-1.6 1,-0.1 -1,-0.3 -0.637 75.1-126.4 -91.7 146.7 -15.1 7.7 -4.4 53 53 A K S S+ 0 0 121 -2,-0.3 39,-2.0 -3,-0.1 2,-0.5 -0.317 74.7 116.6 -84.0 55.6 -17.0 4.4 -4.0 54 54 A K E - D 0 91A 122 -2,-1.6 2,-1.2 37,-0.2 -5,-1.0 -0.962 61.1-144.3-128.0 111.5 -14.1 2.6 -5.5 55 55 A V E - D 0 90A 0 35,-1.2 35,-3.5 -2,-0.5 2,-0.2 -0.649 17.9-151.1 -78.7 99.3 -12.3 0.0 -3.4 56 56 A H E - D 0 89A 21 -2,-1.2 -9,-3.4 -9,-0.3 2,-0.5 -0.542 14.5-168.3 -69.7 135.5 -8.8 0.4 -4.5 57 57 A V E +CD 46 88A 2 31,-1.0 31,-1.1 -2,-0.2 30,-1.0 -0.912 12.6 166.3-140.3 105.0 -7.0 -2.9 -4.0 58 58 A F E -CD 45 86A 7 -13,-0.9 -13,-1.4 -2,-0.5 2,-0.4 -0.501 35.8-121.8-104.6 177.5 -3.3 -3.2 -4.2 59 59 A K E -CD 44 85A 57 26,-2.6 26,-1.6 -15,-0.2 2,-0.5 -0.999 35.1-158.3-123.9 127.4 -1.0 -6.1 -3.1 60 60 A A E +CD 43 84A 0 -17,-1.3 -17,-2.0 -2,-0.4 -22,-0.4 -0.909 21.1 152.2-127.5 123.8 1.5 -4.8 -0.7 61 61 A W E - D 0 83A 34 22,-3.1 22,-3.3 -2,-0.5 2,-0.4 -0.749 30.3-127.5-134.6 179.8 4.9 -6.0 0.3 62 62 A K E - D 0 82A 87 -25,-0.8 2,-0.4 20,-0.3 -23,-0.4 -0.998 12.5-171.2-133.8 140.4 8.2 -4.9 1.6 63 63 A E - 0 0 37 18,-2.7 2,-2.2 -2,-0.4 16,-0.3 -0.959 16.1-152.0-129.6 112.8 11.7 -5.6 0.3 64 64 A I + 0 0 87 -2,-0.4 2,-0.3 16,-0.2 16,-0.2 -0.598 62.8 109.9 -79.9 78.0 14.6 -4.6 2.4 65 65 A V + 0 0 67 -2,-2.2 13,-0.4 14,-1.1 -2,-0.1 -0.990 15.2 127.3-152.2 153.7 16.7 -4.1 -0.7 66 66 A D - 0 0 77 11,-1.5 12,-0.4 -2,-0.3 3,-0.1 0.163 36.5-156.6 157.9 66.4 18.4 -1.5 -2.8 67 67 A A - 0 0 63 10,-0.4 10,-0.2 1,-0.1 2,-0.1 -0.404 37.0 -95.1 -60.6 133.9 22.1 -2.3 -3.3 68 68 A P + 0 0 59 0, 0.0 -1,-0.1 0, 0.0 9,-0.0 -0.260 52.8 155.2 -70.4 128.9 23.9 0.9 -4.2 69 69 A K S S- 0 0 197 -2,-0.1 -2,-0.0 -3,-0.1 -3,-0.0 0.721 99.0 -7.7 -96.0 -63.0 24.7 2.2 -7.6 70 70 A N S S+ 0 0 161 2,-0.0 0, 0.0 0, 0.0 0, 0.0 -0.169 103.4 138.2-124.3 33.8 24.9 5.8 -6.7 71 71 A R - 0 0 40 1,-0.1 2,-0.0 5,-0.1 -4,-0.0 -0.344 56.8 -94.7 -85.0 163.9 23.7 5.7 -3.1 72 72 A P - 0 0 49 0, 0.0 3,-0.4 0, 0.0 -1,-0.1 -0.288 33.9-113.1 -67.7 160.2 25.1 7.5 0.0 73 73 A A S S+ 0 0 108 1,-0.2 -2,-0.1 -2,-0.0 0, 0.0 0.938 119.0 50.3 -62.3 -50.2 27.6 5.8 2.3 74 74 A W S S+ 0 0 191 1,-0.1 -1,-0.2 2,-0.0 -3,-0.0 0.708 95.0 85.6 -59.8 -20.5 25.1 5.6 5.2 75 75 A M S S- 0 0 48 -3,-0.4 4,-0.1 1,-0.1 -4,-0.1 -0.772 75.4-156.7 -90.2 111.1 22.7 4.1 2.7 76 76 A P - 0 0 65 0, 0.0 -1,-0.1 0, 0.0 -5,-0.1 0.681 36.9 -76.1 -65.2-136.0 23.5 0.3 2.7 77 77 A E S S+ 0 0 115 -10,-0.2 -11,-1.5 -13,-0.1 -10,-0.4 0.125 116.2 20.2-117.5 8.5 22.8 -2.4 -0.0 78 78 A K - 0 0 90 -13,-0.4 2,-0.3 -12,-0.4 -13,-0.2 -0.930 68.5-169.8-160.3 169.4 19.2 -2.5 0.9 79 79 A I - 0 0 35 -2,-0.3 -14,-1.1 -16,-0.3 2,-0.5 -0.962 41.5 -74.0-162.7 164.5 16.7 -0.4 2.7 80 80 A S + 0 0 96 -2,-0.3 -16,-0.2 -16,-0.2 -18,-0.0 -0.490 57.6 167.9 -65.3 117.8 13.2 -0.5 4.2 81 81 A K - 0 0 88 -2,-0.5 -18,-2.7 -18,-0.1 2,-0.5 -0.936 26.6-162.7-142.1 112.7 10.8 -0.4 1.3 82 82 A P E -D 62 0A 38 0, 0.0 2,-0.4 0, 0.0 -20,-0.3 -0.846 21.4-168.1 -86.5 124.6 7.1 -1.0 1.2 83 83 A F E -D 61 0A 67 -22,-3.3 -22,-3.1 -2,-0.5 2,-0.4 -0.943 7.8-179.3-120.8 134.7 6.1 -1.7 -2.4 84 84 A V E -D 60 0A 1 -2,-0.4 2,-0.3 -24,-0.2 -24,-0.2 -0.999 9.2-179.4-138.8 137.8 2.6 -1.8 -3.7 85 85 A K E -D 59 0A 113 -26,-1.6 -26,-2.6 -2,-0.4 2,-0.6 -0.909 32.3-118.9-122.4 154.7 1.1 -2.5 -7.1 86 86 A K E -D 58 0A 105 -2,-0.3 -28,-0.3 -28,-0.3 3,-0.1 -0.867 23.0-174.6 -99.7 123.4 -2.7 -2.5 -7.8 87 87 A E E - 0 0 79 -30,-1.0 2,-0.3 -2,-0.6 -29,-0.2 0.661 65.6 -38.5 -89.2 -13.6 -3.9 -5.8 -9.1 88 88 A R E -D 57 0A 114 -31,-1.1 -31,-1.0 2,-0.0 2,-0.4 -0.949 62.8 -95.1 174.1-173.0 -7.4 -4.6 -9.8 89 89 A I E -D 56 0A 64 -2,-0.3 -33,-0.2 -33,-0.2 2,-0.2 -1.000 25.6-158.2-138.9 136.2 -10.2 -2.4 -8.4 90 90 A E E -D 55 0A 40 -35,-3.5 -35,-1.2 -2,-0.4 2,-0.4 -0.517 17.4-120.4-107.0 175.0 -13.2 -3.3 -6.2 91 91 A K E -D 54 0A 147 -37,-0.3 -37,-0.2 -2,-0.2 2,-0.2 -0.927 3.5-144.5-126.3 140.2 -16.5 -1.5 -5.8 92 92 A L 0 0 46 -39,-2.0 -39,-0.1 -2,-0.4 -37,-0.1 -0.404 360.0 360.0 -80.9 175.8 -18.4 0.1 -3.0 93 93 A E 0 0 203 -2,-0.2 -1,-0.0 -39,-0.0 -40,-0.0 0.948 360.0 360.0 -65.2 360.0 -22.2 -0.2 -3.1