==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=6-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER KRINGLE 26-AUG-98 1KIV . COMPND 2 MOLECULE: APOLIPOPROTEIN A; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR I.MOCHALKIN,A.TULINSKY,A.SCANU . 78 1 3 3 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4478.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 32 41.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 2.6 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 12 15.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 10.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 4 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A a 0 0 86 0, 0.0 2,-0.2 0, 0.0 76,-0.2 0.000 360.0 360.0 360.0 160.4 11.6 17.6 26.2 2 2 A Y B -a 77 0A 38 74,-0.7 76,-1.2 2,-0.1 2,-0.2 -0.728 360.0-126.5-121.7 162.6 13.5 14.8 24.6 3 3 A H S > S- 0 0 128 -2,-0.2 3,-3.1 75,-0.2 4,-0.3 -0.670 71.1 -9.7-109.2 171.7 17.0 13.3 24.9 4 4 A G T 3 S- 0 0 39 1,-0.3 -2,-0.1 -2,-0.2 53,-0.0 -0.140 133.4 -26.8 40.5-134.5 19.6 12.6 22.1 5 5 A N T 3 S- 0 0 60 53,-0.1 -1,-0.3 51,-0.1 53,-0.2 0.019 94.1-104.9 -90.2 20.3 17.9 13.0 18.7 6 6 A G S < S+ 0 0 0 -3,-3.1 46,-0.2 51,-0.1 -2,-0.2 0.874 77.5 142.3 55.4 43.8 14.6 12.2 20.4 7 7 A Q S S+ 0 0 82 -4,-0.3 45,-0.3 1,-0.2 -3,-0.1 0.902 75.5 46.9 -76.3 -32.1 14.7 8.7 18.8 8 8 A S S S+ 0 0 102 -5,-0.2 2,-0.4 43,-0.1 -1,-0.2 0.393 81.3 130.3 -84.7 -11.2 13.2 7.4 22.1 9 9 A Y + 0 0 35 -6,-0.2 43,-0.3 1,-0.1 -7,-0.1 -0.401 16.8 157.2 -58.1 120.8 10.6 10.1 22.3 10 10 A R + 0 0 121 -2,-0.4 -1,-0.1 41,-0.1 2,-0.1 -0.308 29.9 133.0-139.9 39.7 7.3 8.4 23.0 11 11 A G - 0 0 18 39,-0.4 39,-0.1 2,-0.1 -9,-0.0 -0.414 64.1-117.4 -90.3 167.0 5.5 11.4 24.5 12 12 A T + 0 0 103 37,-0.1 2,-0.5 -2,-0.1 36,-0.1 -0.012 68.8 122.9 -99.4 28.6 2.1 12.8 23.8 13 13 A F + 0 0 69 37,-0.2 37,-2.6 1,-0.1 -2,-0.1 -0.803 26.2 167.0 -95.0 132.7 3.1 16.2 22.5 14 14 A S + 0 0 25 -2,-0.5 8,-2.0 35,-0.2 2,-0.4 -0.123 31.0 113.9-135.4 39.7 1.8 17.0 19.0 15 15 A T B -B 21 0B 51 6,-0.2 59,-1.8 1,-0.1 6,-0.2 -0.952 58.0-131.1-117.8 129.9 2.2 20.8 18.2 16 16 A T B > -C 73 0C 0 4,-4.0 3,-0.8 -2,-0.4 58,-0.5 -0.045 31.5 -99.4 -66.3 178.6 4.6 21.9 15.6 17 17 A V T 3 S+ 0 0 83 55,-1.6 56,-0.1 1,-0.2 -1,-0.1 0.946 124.6 52.2 -65.5 -44.6 7.2 24.6 16.2 18 18 A T T 3 S- 0 0 84 54,-0.2 -1,-0.2 1,-0.1 3,-0.1 0.120 127.5 -98.0 -76.4 16.9 5.0 27.2 14.5 19 19 A G S < S+ 0 0 52 -3,-0.8 -2,-0.1 1,-0.2 -1,-0.1 0.589 80.5 143.4 71.1 10.3 2.0 26.2 16.7 20 20 A R - 0 0 76 -5,-0.1 -4,-4.0 1,-0.1 2,-0.4 -0.307 52.5-107.3 -79.9 154.1 0.6 24.0 13.9 21 21 A T B -B 15 0B 72 -6,-0.2 43,-3.5 -3,-0.1 44,-0.3 -0.787 27.9-118.2 -91.2 135.4 -1.1 20.6 14.6 22 22 A b B -D 63 0D 2 -8,-2.0 41,-0.3 -2,-0.4 2,-0.1 -0.536 24.5-128.2 -68.8 132.9 0.5 17.3 13.9 23 23 A Q - 0 0 0 39,-3.9 39,-0.4 -2,-0.3 2,-0.3 -0.462 30.6-100.6 -82.3 148.6 -1.2 14.9 11.5 24 24 A S > - 0 0 39 5,-0.3 3,-0.7 -2,-0.1 24,-0.3 -0.597 25.1-134.0 -73.4 127.1 -1.9 11.3 12.5 25 25 A W T 3 S+ 0 0 0 22,-2.2 -1,-0.1 -2,-0.3 23,-0.1 0.655 105.8 55.4 -55.9 -22.0 0.8 9.0 11.1 26 26 A S T 3 S+ 0 0 67 21,-0.3 -1,-0.2 10,-0.2 2,-0.2 0.748 93.9 84.0 -76.0 -43.6 -2.0 6.6 10.0 27 27 A S < - 0 0 41 -3,-0.7 4,-0.1 20,-0.2 6,-0.1 -0.513 61.3-158.9 -72.3 143.1 -3.8 9.3 8.0 28 28 A M + 0 0 34 -2,-0.2 -1,-0.1 4,-0.1 -3,-0.1 0.173 55.0 132.0-102.3 4.3 -2.8 10.1 4.5 29 29 A T S S- 0 0 91 -5,-0.2 -5,-0.3 1,-0.1 -2,-0.1 -0.969 77.6 -10.7-117.8 125.6 -4.6 13.5 5.0 30 30 A P S S+ 0 0 39 0, 0.0 2,-0.7 0, 0.0 -1,-0.1 -0.978 140.3 40.4 -82.1 -24.7 -3.4 16.1 4.3 31 31 A H S S- 0 0 15 32,-0.2 2,-0.5 38,-0.1 31,-0.1 -0.752 74.3-145.1 -93.7 117.9 0.1 14.7 3.7 32 32 A R + 0 0 181 -2,-0.7 2,-0.3 -3,-0.0 -4,-0.1 -0.741 39.3 153.1 -77.7 124.6 0.2 11.4 1.9 33 33 A H - 0 0 8 -2,-0.5 -4,-0.0 -8,-0.1 -2,-0.0 -0.975 52.8-135.8-150.0 171.9 3.1 9.4 3.2 34 34 A Q S S+ 0 0 132 -2,-0.3 2,-2.6 1,-0.1 5,-0.2 0.413 75.3 101.9-112.6 -4.3 4.7 6.1 4.0 35 35 A R + 0 0 66 4,-0.1 -1,-0.1 3,-0.1 3,-0.0 -0.499 59.2 153.4 -79.6 72.8 6.0 6.7 7.5 36 37 A T >> - 0 0 10 -2,-2.6 4,-2.0 1,-0.1 3,-0.8 -0.631 63.6-124.1-107.4 156.0 3.0 4.7 8.9 37 38 A P T 34 S+ 0 0 43 0, 0.0 6,-0.2 0, 0.0 -1,-0.1 0.824 119.2 59.2 -58.6 -28.5 2.7 2.7 12.1 38 39 A E T 34 S+ 0 0 135 1,-0.2 -3,-0.1 2,-0.1 -12,-0.0 0.644 111.2 35.1 -70.1 -29.6 1.8 0.1 9.5 39 40 A N T <4 S+ 0 0 81 -3,-0.8 -1,-0.2 1,-0.2 -4,-0.1 0.612 129.9 34.7 -95.8 -30.2 5.2 0.3 7.7 40 41 A Y >< + 0 0 83 -4,-2.0 3,-1.2 1,-0.1 5,-0.4 -0.689 66.8 170.0-132.1 78.8 7.2 1.0 10.9 41 42 A P T 3 S+ 0 0 94 0, 0.0 3,-0.3 0, 0.0 -1,-0.1 0.654 75.2 52.8 -69.1 -20.8 5.7 -1.0 13.8 42 43 A N T 3 S+ 0 0 151 1,-0.2 0, 0.0 2,-0.1 0, 0.0 0.069 89.1 85.9-105.9 29.2 8.4 -0.4 16.3 43 44 A D S < S- 0 0 34 -3,-1.2 9,-0.3 -6,-0.2 -1,-0.2 0.595 95.5-112.3-104.9 -11.8 8.5 3.4 16.0 44 45 A G + 0 0 16 -3,-0.3 2,-4.5 -4,-0.2 5,-0.1 0.535 54.1 161.1 93.0 4.0 5.9 4.9 18.3 45 46 A L + 0 0 10 -5,-0.4 2,-0.4 -9,-0.1 -1,-0.1 -0.047 18.8 153.0 -55.6 41.7 3.8 6.1 15.4 46 47 A T > - 0 0 72 -2,-4.5 3,-1.3 -3,-0.1 -21,-0.0 -0.693 61.1 -47.2 -84.1 135.5 0.8 6.4 17.7 47 48 A M T 3 S- 0 0 112 -2,-0.4 -22,-2.2 1,-0.3 -21,-0.3 -0.145 108.6 -40.2 41.7-129.2 -2.0 8.9 16.8 48 49 A N T 3 S+ 0 0 40 -24,-0.3 -1,-0.3 -23,-0.1 -26,-0.1 0.207 94.1 142.8-106.9 2.3 -0.5 12.4 15.9 49 50 A Y < - 0 0 50 -3,-1.3 2,-0.4 1,-0.1 -35,-0.2 -0.070 59.5 -98.4 -46.2 154.3 2.2 12.3 18.6 50 51 A c + 0 0 0 -37,-2.6 -39,-0.4 -39,-0.1 2,-0.2 -0.599 54.7 159.2 -77.8 129.9 5.6 13.8 17.9 51 52 A R B -E 60 0E 6 9,-1.2 9,-2.3 -2,-0.4 -44,-0.1 -0.814 41.8-141.5-147.4 166.2 8.3 11.1 17.0 52 53 A N > + 0 0 0 -45,-0.3 3,-1.0 -43,-0.3 -43,-0.1 -0.603 32.7 159.5-132.2 60.8 11.6 10.9 15.2 53 54 A P T 3 S+ 0 0 8 0, 0.0 -46,-0.1 0, 0.0 -11,-0.1 0.422 71.1 56.0 -65.1 -3.0 11.2 7.6 13.4 54 55 A D T 3 S- 0 0 61 -3,-0.0 -47,-0.1 0, 0.0 3,-0.0 0.296 111.4-101.6-126.8 24.7 14.0 8.7 11.1 55 56 A A < + 0 0 67 -3,-1.0 -49,-0.1 -50,-0.1 -48,-0.1 0.859 69.4 153.8 61.0 30.7 17.2 9.7 12.8 56 57 A D - 0 0 33 -51,-0.2 -51,-0.1 2,-0.1 -4,-0.1 -0.133 59.5-102.1 -75.8-169.8 16.2 13.3 12.4 57 58 A T S S- 0 0 107 1,-0.2 -51,-0.1 -51,-0.1 -50,-0.1 0.435 95.0 -1.2 -99.1 -2.8 17.7 15.7 15.1 58 60 A G S S- 0 0 3 -53,-0.2 2,-0.3 -52,-0.1 -1,-0.2 -0.943 98.4 -64.2-168.6 167.1 14.6 16.1 17.3 59 61 A P + 0 0 3 0, 0.0 14,-2.1 0, 0.0 -7,-0.3 -0.487 61.5 164.6 -64.0 126.1 11.0 14.8 17.3 60 62 A W E -EF 51 72E 12 -9,-2.3 -9,-1.2 -2,-0.3 2,-0.3 -0.270 14.2-165.9-126.2-158.3 9.0 16.1 14.2 61 63 A b E - F 0 71E 0 10,-1.1 10,-2.1 -11,-0.2 2,-0.3 -0.930 33.2 -87.0 176.4 161.2 5.7 15.3 12.4 62 64 A F E - F 0 70E 11 -39,-0.4 -39,-3.9 -2,-0.3 2,-0.3 -0.621 53.3-124.2 -81.1 138.6 3.5 15.8 9.2 63 65 A T B -D 22 0D 0 6,-1.8 -41,-0.2 5,-0.7 -32,-0.2 -0.783 8.8-133.3 -90.2 144.1 1.4 18.9 9.6 64 66 A M S S+ 0 0 107 -43,-3.5 -42,-0.1 -2,-0.3 -1,-0.1 0.485 86.0 102.7 -73.3 3.5 -2.4 19.3 9.4 65 67 A D > - 0 0 38 3,-0.4 3,-1.8 -44,-0.3 -2,-0.2 -0.709 66.7-155.2 -89.8 113.4 -1.4 22.2 7.2 66 68 A P T 3 S+ 0 0 99 0, 0.0 -1,-0.2 0, 0.0 3,-0.1 0.766 99.1 52.3 -56.4 -24.7 -1.9 21.2 3.6 67 69 A S T 3 S+ 0 0 104 1,-0.2 2,-0.6 -3,-0.0 -3,-0.1 0.653 103.8 61.1 -82.7 -30.6 0.7 23.9 2.9 68 70 A I < - 0 0 52 -3,-1.8 -5,-0.7 1,-0.2 -3,-0.4 -0.886 62.5-167.8-112.8 107.9 3.3 22.5 5.4 69 71 A R - 0 0 124 -2,-0.6 -6,-1.8 -7,-0.1 2,-0.3 0.905 68.6 -32.4 -52.9 -61.7 4.5 18.9 4.7 70 72 A W E -F 62 0E 98 -8,-0.3 2,-0.3 -6,-0.1 -8,-0.2 -0.887 57.6-176.4-154.0 174.2 6.1 18.5 8.1 71 73 A E E -F 61 0E 22 -10,-2.1 -10,-1.1 -2,-0.3 -3,-0.0 -0.968 36.1 -88.1-164.5 159.0 8.0 20.4 10.9 72 74 A Y E -F 60 0E 85 -2,-0.3 -55,-1.6 -12,-0.2 2,-0.3 -0.284 48.2-111.1 -68.2 165.9 9.7 19.8 14.2 73 75 A c B -C 16 0C 9 -14,-2.1 2,-2.3 -57,-0.3 -57,-0.2 -0.772 31.4 -96.8-101.1 154.0 7.7 19.9 17.4 74 76 A N S S+ 0 0 97 -59,-1.8 2,-0.2 -58,-0.5 -58,-0.1 -0.420 80.8 123.0 -71.1 63.2 7.8 22.5 20.1 75 77 A L - 0 0 37 -2,-2.3 2,-0.4 -16,-0.2 -3,-0.0 -0.723 52.3-130.4-125.2 168.7 10.1 20.6 22.4 76 78 A T - 0 0 98 -2,-0.2 2,-1.7 -18,-0.0 -74,-0.7 -0.971 27.1-111.1-134.8 132.7 13.5 20.9 24.1 77 79 A R B a 2 0A 155 -2,-0.4 -74,-0.2 -76,-0.2 -73,-0.1 -0.339 360.0 360.0 -60.0 86.3 16.5 18.7 24.2 78 80 A a 0 0 72 -2,-1.7 -75,-0.2 -76,-1.2 -1,-0.2 0.913 360.0 360.0 -34.4 360.0 16.3 17.6 27.8