==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION REGULATOR 08-MAY-09 2KIS . COMPND 2 MOLECULE: TRANSCRIPTION ELONGATION REGULATOR 1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR J.M.MURPHY,D.HANSEN,S.WIESNER,D.MUHANDIRAM,M.BORG,M.J.SMITH, . 71 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5284.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 52 73.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 12.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 39 54.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 613 A G 0 0 90 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 60.4 -17.0 15.9 2.0 2 614 A A - 0 0 91 2,-0.1 0, 0.0 5,-0.0 0, 0.0 0.989 360.0 -23.6 55.6 74.2 -13.4 16.8 2.9 3 615 A M S S+ 0 0 150 1,-0.1 0, 0.0 0, 0.0 0, 0.0 0.958 116.7 86.5 57.4 92.7 -12.1 13.4 3.8 4 616 A G S S+ 0 0 52 0, 0.0 -2,-0.1 0, 0.0 -1,-0.1 0.229 78.0 53.1 176.1 -26.5 -15.0 11.2 4.7 5 617 A S S > S- 0 0 89 3,-0.1 4,-0.6 4,-0.0 0, 0.0 0.840 128.3 -20.7 -90.8 -91.9 -16.5 9.7 1.5 6 618 A L H > S+ 0 0 69 2,-0.2 4,-2.9 1,-0.1 5,-0.3 0.835 130.8 66.0 -89.8 -38.6 -14.0 7.8 -0.8 7 619 A E H > S+ 0 0 112 1,-0.2 4,-0.8 2,-0.2 5,-0.1 0.874 99.0 55.0 -50.2 -42.1 -10.9 9.4 0.5 8 620 A A H > S+ 0 0 32 2,-0.2 4,-2.3 1,-0.2 3,-0.4 0.927 110.3 44.7 -58.7 -46.7 -11.4 7.7 3.9 9 621 A R H X S+ 0 0 103 -4,-0.6 4,-1.3 -3,-0.3 -2,-0.2 0.941 113.2 49.3 -62.6 -48.9 -11.6 4.3 2.2 10 622 A M H X S+ 0 0 58 -4,-2.9 4,-1.4 1,-0.2 -1,-0.3 0.632 113.0 51.6 -65.7 -11.9 -8.6 5.0 0.1 11 623 A K H X S+ 0 0 117 -4,-0.8 4,-2.6 -3,-0.4 -2,-0.2 0.815 102.8 54.2 -92.1 -39.5 -7.0 6.1 3.3 12 624 A Q H X S+ 0 0 100 -4,-2.3 4,-1.4 1,-0.2 -2,-0.2 0.741 113.0 48.6 -65.4 -21.2 -7.8 3.0 5.3 13 625 A F H X S+ 0 0 0 -4,-1.3 4,-2.2 2,-0.2 -2,-0.2 0.937 108.9 47.7 -82.4 -53.6 -6.1 1.3 2.4 14 626 A K H X S+ 0 0 77 -4,-1.4 4,-1.3 1,-0.2 -2,-0.2 0.899 114.1 50.6 -53.3 -42.1 -3.0 3.4 2.2 15 627 A D H >X S+ 0 0 70 -4,-2.6 3,-0.8 1,-0.2 4,-0.8 0.950 105.9 53.5 -61.0 -51.5 -2.7 2.9 6.0 16 628 A M H >X S+ 0 0 0 -4,-1.4 4,-2.1 1,-0.3 3,-0.8 0.863 104.5 57.2 -51.4 -38.9 -3.1 -0.8 5.8 17 629 A L H 3X>S+ 0 0 0 -4,-2.2 5,-1.8 1,-0.3 4,-0.9 0.882 109.9 43.3 -60.1 -39.2 -0.2 -0.8 3.3 18 630 A L H <<5S+ 0 0 87 -4,-1.3 -1,-0.3 -3,-0.8 -2,-0.2 0.498 109.7 62.7 -83.6 -5.1 1.9 0.9 6.0 19 631 A E H <<5S+ 0 0 117 -4,-0.8 -2,-0.2 -3,-0.8 -3,-0.2 0.936 121.3 14.7 -84.3 -54.1 0.5 -1.5 8.5 20 632 A R H <5S- 0 0 69 -4,-2.1 3,-0.2 11,-0.1 -2,-0.2 0.541 112.0-112.4 -97.5 -10.1 1.8 -4.9 7.2 21 633 A G T <5 - 0 0 31 -4,-0.9 2,-2.6 -5,-0.5 -3,-0.2 0.955 17.5-145.6 75.5 85.2 4.3 -3.2 4.9 22 634 A V < - 0 0 0 -5,-1.8 4,-0.2 1,-0.1 -1,-0.2 -0.432 41.0-115.8 -79.2 62.5 3.3 -3.8 1.2 23 635 A S > - 0 0 27 -2,-2.6 3,-1.1 -3,-0.2 8,-0.1 0.456 14.8-139.3 -2.9 107.9 7.0 -3.9 0.4 24 636 A A T 3 S+ 0 0 10 1,-0.3 -1,-0.2 32,-0.1 37,-0.1 0.322 100.9 41.3 -66.4 11.4 7.5 -0.9 -1.9 25 637 A F T 3 S+ 0 0 83 2,-0.1 -1,-0.3 36,-0.0 2,-0.2 -0.229 101.0 77.7-155.2 54.1 9.7 -3.3 -3.9 26 638 A S S < S- 0 0 53 -3,-1.1 2,-0.4 -4,-0.2 -4,-0.0 -0.827 84.8 -64.7-148.2-174.9 8.0 -6.7 -4.2 27 639 A T >> - 0 0 76 -2,-0.2 4,-2.3 1,-0.1 3,-1.0 -0.697 37.1-129.7 -87.5 130.5 5.2 -8.5 -6.0 28 640 A W T 34 S+ 0 0 64 -2,-0.4 4,-0.5 1,-0.3 -1,-0.1 0.708 108.3 58.5 -46.8 -24.6 1.6 -7.3 -5.4 29 641 A E T 3> S+ 0 0 113 2,-0.2 4,-1.5 1,-0.2 -1,-0.3 0.915 104.1 46.3 -76.1 -45.8 0.8 -11.0 -4.7 30 642 A K H <> S+ 0 0 106 -3,-1.0 4,-1.6 1,-0.3 -2,-0.2 0.924 114.4 50.7 -59.6 -39.0 3.2 -11.4 -1.8 31 643 A E H X S+ 0 0 5 -4,-2.3 4,-1.6 2,-0.2 5,-0.3 0.740 102.2 66.3 -68.9 -22.8 1.9 -8.1 -0.6 32 644 A L H >> S+ 0 0 35 -4,-0.5 4,-2.9 -5,-0.3 3,-2.0 0.995 101.0 42.0 -60.7 -73.9 -1.6 -9.6 -1.1 33 645 A H H 3X S+ 0 0 76 -4,-1.5 4,-1.3 1,-0.3 -1,-0.2 0.849 109.5 63.8 -41.5 -40.4 -1.4 -12.3 1.7 34 646 A K H 3< S+ 0 0 91 -4,-1.6 -1,-0.3 -5,-0.2 -2,-0.2 0.885 125.5 11.1 -51.3 -46.2 0.3 -9.6 3.8 35 647 A I H X< S+ 0 0 0 -3,-2.0 3,-2.8 -4,-1.6 6,-0.2 0.845 113.9 73.6-100.4 -48.5 -2.9 -7.4 3.7 36 648 A V H 3< S+ 0 0 48 -4,-2.9 -3,-0.2 1,-0.3 5,-0.2 0.712 76.7 83.2 -41.2 -27.3 -5.6 -9.7 2.2 37 649 A F T 3< S+ 0 0 180 -4,-1.3 -1,-0.3 -5,-0.5 -2,-0.1 0.627 93.1 62.5 -54.2 -7.6 -5.6 -11.4 5.6 38 650 A D S X S- 0 0 53 -3,-2.8 3,-0.9 -5,-0.1 4,-0.1 -0.871 84.7-135.3-117.8 150.9 -7.8 -8.5 6.3 39 651 A P G > S+ 0 0 103 0, 0.0 3,-1.1 0, 0.0 -3,-0.1 0.574 99.3 74.7 -82.0 -9.5 -11.3 -7.7 4.7 40 652 A R G > S+ 0 0 56 1,-0.2 3,-1.0 -5,-0.2 4,-0.3 0.529 77.2 78.0 -78.5 -5.1 -10.3 -4.0 4.2 41 653 A Y G < S+ 0 0 30 -3,-0.9 -1,-0.2 1,-0.3 -5,-0.1 0.715 88.1 58.9 -72.1 -20.0 -8.1 -5.3 1.3 42 654 A L G < S+ 0 0 123 -3,-1.1 -1,-0.3 1,-0.1 -2,-0.1 -0.073 81.3 98.9 -99.3 31.5 -11.3 -5.5 -0.6 43 655 A L S < S+ 0 0 42 -3,-1.0 -2,-0.1 -34,-0.1 -1,-0.1 0.966 73.5 43.4 -80.5 -77.2 -12.1 -1.8 -0.2 44 656 A L S S- 0 0 4 -4,-0.3 -1,-0.0 -35,-0.2 -38,-0.0 -0.351 87.5-113.1 -72.0 152.1 -11.0 0.1 -3.4 45 657 A N > - 0 0 105 1,-0.1 4,-3.3 -2,-0.1 5,-0.4 -0.315 42.9 -86.9 -77.9 166.1 -11.8 -1.4 -6.8 46 658 A P T 4 S+ 0 0 98 0, 0.0 -1,-0.1 0, 0.0 4,-0.1 0.532 130.6 51.7 -52.4 -3.7 -9.0 -2.6 -9.2 47 659 A K T > S+ 0 0 160 2,-0.1 4,-1.6 3,-0.1 3,-0.2 0.872 115.3 32.8 -96.4 -62.4 -8.8 1.0 -10.3 48 660 A E H > S+ 0 0 40 1,-0.2 4,-1.6 2,-0.2 -4,-0.1 0.769 121.2 54.3 -66.1 -25.0 -8.5 3.0 -7.1 49 661 A R H X S+ 0 0 40 -4,-3.3 4,-1.5 2,-0.2 -1,-0.2 0.820 102.3 56.7 -78.2 -31.8 -6.5 0.1 -5.7 50 662 A K H > S+ 0 0 108 -5,-0.4 4,-2.1 -3,-0.2 5,-0.2 0.902 109.6 45.1 -65.3 -42.0 -4.1 0.2 -8.6 51 663 A Q H X S+ 0 0 67 -4,-1.6 4,-2.9 1,-0.2 5,-0.3 0.922 108.1 56.8 -68.0 -44.8 -3.2 3.8 -7.9 52 664 A V H X S+ 0 0 4 -4,-1.6 4,-1.2 1,-0.2 -1,-0.2 0.833 111.6 44.7 -56.5 -34.1 -2.9 3.2 -4.2 53 665 A F H X S+ 0 0 24 -4,-1.5 4,-2.9 2,-0.2 5,-0.3 0.968 116.9 40.3 -75.6 -56.4 -0.2 0.5 -4.9 54 666 A D H X S+ 0 0 95 -4,-2.1 4,-1.2 1,-0.2 -2,-0.2 0.838 119.1 49.4 -61.9 -33.2 1.9 2.3 -7.5 55 667 A Q H X S+ 0 0 100 -4,-2.9 4,-1.8 -5,-0.2 5,-0.3 0.824 113.6 45.4 -75.8 -32.9 1.6 5.5 -5.6 56 668 A Y H X S+ 0 0 16 -4,-1.2 4,-2.6 -5,-0.3 5,-0.4 0.948 114.2 46.1 -74.9 -51.4 2.6 3.9 -2.3 57 669 A V H X S+ 0 0 24 -4,-2.9 4,-1.2 3,-0.2 5,-0.3 0.802 113.5 53.3 -61.4 -30.1 5.5 2.0 -3.7 58 670 A K H X S+ 0 0 112 -4,-1.2 4,-1.9 -5,-0.3 -2,-0.2 0.982 118.3 29.8 -70.3 -59.4 6.7 5.1 -5.5 59 671 A T H X S+ 0 0 72 -4,-1.8 4,-1.6 2,-0.2 -2,-0.2 0.940 122.2 50.4 -67.5 -48.5 6.8 7.6 -2.6 60 672 A R H X S+ 0 0 79 -4,-2.6 4,-2.7 -5,-0.3 5,-0.3 0.931 111.8 47.8 -56.1 -50.4 7.6 5.0 0.1 61 673 A A H X S+ 0 0 22 -4,-1.2 4,-1.9 -5,-0.4 5,-0.3 0.958 106.2 56.1 -56.6 -55.6 10.5 3.5 -1.9 62 674 A E H X S+ 0 0 126 -4,-1.9 4,-1.7 -5,-0.3 -1,-0.2 0.837 116.1 39.3 -45.8 -39.3 12.1 6.9 -2.7 63 675 A E H X S+ 0 0 61 -4,-1.6 4,-1.7 -3,-0.3 -2,-0.2 0.979 116.1 45.2 -77.0 -62.1 12.2 7.7 1.0 64 676 A E H X S+ 0 0 12 -4,-2.7 4,-0.9 1,-0.2 6,-0.6 0.619 117.4 51.6 -59.3 -11.0 13.2 4.3 2.5 65 677 A R H X S+ 0 0 118 -4,-1.9 4,-1.2 -5,-0.3 -1,-0.2 0.908 105.0 48.8 -90.3 -54.1 15.8 4.1 -0.2 66 678 A R H < S+ 0 0 179 -4,-1.7 -2,-0.2 -5,-0.3 -3,-0.1 0.769 113.7 53.1 -57.5 -26.4 17.5 7.5 0.1 67 679 A E H < S- 0 0 130 -4,-1.7 -1,-0.2 -5,-0.1 -2,-0.2 0.993 140.9 -50.6 -72.3 -71.3 17.8 6.7 3.8 68 680 A K H < S- 0 0 171 -4,-0.9 -3,-0.2 -5,-0.1 -2,-0.2 0.054 73.5 -93.4-161.5 31.0 19.4 3.3 3.9 69 681 A K < - 0 0 106 -4,-1.2 2,-2.0 -5,-0.2 -4,-0.2 0.612 54.9-118.6 60.7 10.8 17.4 1.1 1.6 70 682 A N 0 0 109 -6,-0.6 -1,-0.1 -5,-0.1 -5,-0.1 -0.372 360.0 360.0 61.4 -82.7 15.5 0.2 4.8 71 683 A K 0 0 214 -2,-2.0 -1,-0.1 -7,-0.0 0, 0.0 -0.424 360.0 360.0 -59.3 360.0 16.3 -3.5 4.6