==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=22-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER KRINGLE 08-SEP-98 3KIV . COMPND 2 MOLECULE: APOLIPOPROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR I.MOCHALKIN,A.TULINSKY,A.SCANU . 79 1 3 3 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4646.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 34 43.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 3 3.8 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 12 15.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 6.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 11.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 4 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 0 A Q 0 0 208 0, 0.0 76,-1.4 0, 0.0 2,-0.4 0.000 360.0 360.0 360.0 2.4 8.6 19.2 27.5 2 1 A a E -a 77 0A 49 74,-0.2 2,-0.3 76,-0.1 76,-0.2 -0.975 360.0-150.1-130.4 153.0 12.0 18.0 26.4 3 2 A Y E -a 78 0A 37 74,-2.0 76,-3.6 -2,-0.4 2,-0.3 -0.694 20.8-126.4-109.5 146.3 13.5 15.3 24.2 4 3 A H > - 0 0 133 -2,-0.3 3,-2.9 74,-0.2 4,-0.3 -0.709 67.3 -23.8-102.0 154.8 16.9 13.6 24.7 5 4 A G T 3 S- 0 0 43 -2,-0.3 -2,-0.1 1,-0.3 74,-0.0 -0.218 133.0 -16.5 54.9-120.0 19.6 13.3 22.0 6 5 A N T 3 S- 0 0 63 53,-0.1 -1,-0.3 72,-0.1 51,-0.1 0.276 93.9-104.9 -95.5 5.2 17.9 13.5 18.6 7 6 A G S X S+ 0 0 0 -3,-2.9 3,-0.9 52,-0.2 46,-0.2 0.548 83.4 129.1 78.1 9.2 14.3 12.8 19.8 8 7 A Q T 3 S+ 0 0 69 -4,-0.3 45,-0.3 1,-0.2 -3,-0.1 0.873 77.3 39.6 -64.0 -33.4 14.4 9.3 18.4 9 8 A S T 3 S+ 0 0 102 -5,-0.3 -1,-0.2 43,-0.1 2,-0.2 0.260 84.7 128.6 -92.8 -1.3 13.2 7.9 21.8 10 9 A Y < + 0 0 34 -3,-0.9 43,-0.2 -6,-0.2 -7,-0.1 -0.522 23.7 167.7 -68.6 131.3 10.7 10.6 22.5 11 10 A R + 0 0 115 -2,-0.2 -1,-0.1 41,-0.1 2,-0.1 -0.260 29.0 133.1-138.9 39.3 7.3 9.1 23.3 12 11 A G - 0 0 18 39,-0.2 39,-0.1 2,-0.1 -9,-0.0 -0.279 63.8-116.6 -83.8 172.5 5.5 12.2 24.7 13 12 A T + 0 0 100 37,-0.1 36,-0.1 -2,-0.1 2,-0.1 0.304 66.0 129.1-101.3 17.6 2.1 13.5 23.9 14 13 A F + 0 0 72 37,-0.1 37,-2.8 1,-0.1 -2,-0.1 -0.440 24.9 171.1 -72.8 139.4 3.0 16.8 22.3 15 14 A S + 0 0 30 35,-0.2 8,-1.9 -2,-0.1 2,-0.4 -0.065 37.2 107.6-140.2 33.1 1.5 17.4 18.9 16 15 A T B -B 22 0B 46 6,-0.2 59,-2.6 59,-0.1 6,-0.2 -0.923 58.0-130.6-126.4 139.0 2.3 21.0 18.0 17 16 A T B > -C 74 0C 0 4,-2.4 3,-0.9 -2,-0.4 57,-0.3 -0.250 29.5-108.4 -78.1 163.0 4.7 22.5 15.5 18 17 A V T 3 S+ 0 0 89 55,-2.1 56,-0.1 1,-0.3 -1,-0.1 0.841 123.9 50.0 -60.8 -35.5 7.2 25.2 16.2 19 18 A T T 3 S- 0 0 79 54,-0.3 -1,-0.3 0, 0.0 55,-0.1 0.507 127.7-102.6 -75.9 -15.5 5.0 27.6 14.1 20 19 A G S < S+ 0 0 51 -3,-0.9 -2,-0.2 1,-0.2 2,-0.1 0.651 74.7 145.1 92.9 14.6 2.1 26.5 16.2 21 20 A R - 0 0 54 1,-0.0 -4,-2.4 45,-0.0 2,-0.3 -0.283 51.4-111.5 -68.9 166.0 0.6 24.2 13.5 22 21 A T B -B 16 0B 74 -6,-0.2 43,-2.4 -2,-0.1 44,-0.3 -0.841 31.0-114.0-104.4 145.9 -1.2 20.9 14.5 23 22 A b B -D 64 0D 3 -8,-1.9 2,-0.3 -2,-0.3 41,-0.3 -0.426 23.5-126.6 -75.8 144.2 0.5 17.5 13.6 24 23 A Q - 0 0 3 39,-3.0 39,-0.4 -2,-0.1 2,-0.2 -0.718 35.6-100.7 -84.2 148.7 -1.3 15.3 11.1 25 24 A S > - 0 0 41 -2,-0.3 3,-0.8 5,-0.3 24,-0.3 -0.445 24.0-130.7 -67.8 135.6 -1.9 11.8 12.4 26 25 A W T 3 S+ 0 0 0 22,-1.7 -1,-0.1 1,-0.2 8,-0.1 0.851 109.0 54.4 -58.7 -34.8 0.7 9.3 11.1 27 26 A S T 3 S+ 0 0 75 21,-0.4 2,-0.3 19,-0.2 -1,-0.2 0.755 95.1 94.4 -70.1 -19.8 -2.0 6.8 10.0 28 27 A S < - 0 0 38 -3,-0.8 4,-0.1 1,-0.1 6,-0.1 -0.497 55.4-167.4 -81.6 139.2 -3.6 9.7 8.0 29 28 A M + 0 0 70 -2,-0.3 -1,-0.1 4,-0.1 -3,-0.1 0.259 54.8 125.9 -97.1 0.3 -2.9 10.3 4.3 30 29 A T S S- 0 0 101 -5,-0.2 -5,-0.3 1,-0.1 -2,-0.1 -0.969 76.0 -7.1-127.5 138.1 -4.5 13.7 4.6 31 30 A P S S+ 0 0 48 0, 0.0 2,-0.5 0, 0.0 -1,-0.1 -0.990 141.5 33.4 -77.7 -18.9 -3.7 16.4 3.9 32 31 A H S S- 0 0 15 32,-0.2 2,-0.3 38,-0.1 -2,-0.1 -0.897 73.7-144.5-104.4 133.8 -0.2 15.1 3.2 33 32 A R + 0 0 207 -2,-0.5 2,-0.3 2,-0.0 -4,-0.1 -0.673 37.4 144.8 -89.1 138.6 0.2 11.5 1.7 34 33 A H - 0 0 10 -2,-0.3 3,-0.0 -8,-0.1 29,-0.0 -0.961 53.5-118.9-164.2 174.9 3.4 9.7 3.0 35 34 A Q S S+ 0 0 120 -2,-0.3 2,-1.4 1,-0.1 5,-0.1 0.214 77.5 102.1-115.8 13.7 4.9 6.3 4.0 36 35 A R + 0 0 71 -10,-0.1 -1,-0.1 4,-0.1 19,-0.0 -0.506 54.0 150.3 -97.8 69.5 5.8 6.9 7.6 37 37 A T >> - 0 0 8 -2,-1.4 4,-2.6 1,-0.1 3,-1.2 -0.712 64.6-120.2 -98.8 153.1 2.9 4.9 8.9 38 38 A P T 34 S+ 0 0 44 0, 0.0 6,-0.1 0, 0.0 7,-0.1 0.828 118.8 64.6 -53.2 -25.3 2.6 2.9 12.1 39 39 A E T 34 S+ 0 0 131 1,-0.2 -3,-0.1 2,-0.1 -12,-0.0 0.866 110.7 30.6 -65.6 -42.1 2.0 0.2 9.5 40 40 A N T <4 S+ 0 0 84 -3,-1.2 -1,-0.2 1,-0.2 3,-0.1 0.700 131.2 36.4 -92.1 -20.9 5.5 0.5 8.0 41 41 A Y ><> + 0 0 73 -4,-2.6 3,-1.7 1,-0.1 5,-0.6 -0.630 66.4 165.8-130.6 66.9 7.3 1.5 11.3 42 42 A P T 3 5S+ 0 0 90 0, 0.0 3,-0.2 0, 0.0 -1,-0.1 0.582 76.2 49.9 -63.9 -9.2 5.4 -0.5 13.9 43 43 A N T 3 5S+ 0 0 144 1,-0.1 -2,-0.0 -3,-0.1 -3,-0.0 0.282 88.2 77.7-118.9 22.2 8.2 0.2 16.4 44 44 A D T < 5S- 0 0 36 -3,-1.7 9,-0.3 -6,-0.1 -1,-0.1 0.233 101.6-112.3-116.4 13.8 8.6 4.1 16.2 45 45 A G T 5 + 0 0 18 -3,-0.2 2,-2.8 1,-0.2 5,-0.1 0.756 46.2 174.6 61.6 43.0 5.6 4.9 18.2 46 46 A L < + 0 0 8 -5,-0.6 2,-0.4 -9,-0.1 -1,-0.2 -0.303 23.7 159.5 -75.1 52.4 3.7 6.5 15.3 47 47 A T > - 0 0 78 -2,-2.8 3,-2.1 -3,-0.1 -21,-0.0 -0.731 57.1 -42.5 -82.9 132.1 0.6 6.9 17.8 48 48 A M T 3 S- 0 0 125 -2,-0.4 -22,-1.7 1,-0.2 -21,-0.4 -0.289 111.5 -43.9 44.1-121.3 -2.2 9.4 17.1 49 49 A N T 3 S+ 0 0 35 -24,-0.3 -26,-0.2 -23,-0.1 -1,-0.2 -0.128 90.7 152.1-125.0 31.8 -0.6 12.6 15.8 50 50 A Y < - 0 0 49 -3,-2.1 -35,-0.2 -5,-0.1 2,-0.2 -0.317 55.5-101.9 -67.5 146.7 2.2 12.7 18.4 51 51 A c + 0 0 0 -37,-2.8 -39,-0.2 9,-0.1 2,-0.2 -0.617 58.8 157.0 -66.3 133.7 5.5 14.4 17.5 52 52 A R B -E 61 0E 8 9,-2.2 9,-2.6 -2,-0.2 -44,-0.1 -0.779 42.1-136.1-147.8-177.3 8.1 11.6 16.7 53 53 A N > + 0 0 3 -9,-0.3 3,-1.0 -45,-0.3 -43,-0.1 -0.527 32.7 156.9-149.8 71.0 11.3 11.1 14.7 54 54 A P T 3 S+ 0 0 12 0, 0.0 -1,-0.1 0, 0.0 -11,-0.1 0.466 75.9 52.6 -74.6 -13.0 11.1 7.8 12.7 55 55 A D T 3 S- 0 0 64 -19,-0.0 -47,-0.0 0, 0.0 -19,-0.0 0.021 114.6-106.3-111.0 18.2 13.8 9.0 10.2 56 56 A A < + 0 0 60 -3,-1.0 2,-0.1 -48,-0.1 -49,-0.1 0.925 62.9 159.6 54.8 48.1 16.6 10.0 12.7 57 57 A D - 0 0 32 2,-0.1 -49,-0.1 -51,-0.1 -1,-0.1 -0.102 56.4 -93.3 -83.5-169.8 16.1 13.7 12.2 58 58 A T S S- 0 0 98 1,-0.2 -51,-0.1 -51,-0.1 -5,-0.0 0.402 97.9 -2.3 -94.1 -0.4 17.5 16.1 14.9 59 60 A G S S- 0 0 3 -52,-0.1 -1,-0.2 -7,-0.1 -52,-0.2 -0.912 95.5 -63.3-171.4 165.4 14.3 16.4 17.0 60 61 A P + 0 0 3 0, 0.0 14,-2.6 0, 0.0 2,-0.3 -0.242 60.7 162.0 -62.7 137.0 10.7 15.2 17.0 61 62 A W E -EF 52 73E 4 -9,-2.6 -9,-2.2 12,-0.3 2,-0.3 -0.844 17.4-161.2-142.7 174.7 8.7 16.5 14.1 62 63 A b E - F 0 72E 0 10,-2.2 10,-1.8 -2,-0.3 2,-0.2 -0.986 32.5 -92.7-160.5 164.0 5.4 15.7 12.2 63 64 A F E - F 0 71E 7 -39,-0.4 -39,-3.0 -2,-0.3 2,-0.3 -0.512 53.7-125.0 -72.9 154.4 3.5 16.2 9.1 64 65 A T B -D 23 0D 0 6,-1.8 -41,-0.2 5,-0.6 -32,-0.2 -0.807 9.8-135.1-107.4 157.6 1.3 19.2 9.4 65 66 A T S S+ 0 0 76 -43,-2.4 -42,-0.1 -2,-0.3 -1,-0.1 0.572 82.3 101.4 -81.9 -11.7 -2.4 19.7 9.0 66 67 A D S > S- 0 0 48 -44,-0.3 3,-1.8 3,-0.3 -2,-0.2 -0.641 70.1-149.3 -74.5 107.1 -1.6 22.9 7.0 67 68 A P T 3 S+ 0 0 103 0, 0.0 -1,-0.2 0, 0.0 3,-0.1 0.739 96.4 56.4 -53.7 -20.9 -2.0 21.7 3.5 68 69 A S T 3 S+ 0 0 102 1,-0.2 2,-0.5 2,-0.0 -3,-0.1 0.669 104.5 56.5 -82.7 -31.1 0.6 24.3 2.5 69 70 A I < - 0 0 55 -3,-1.8 -5,-0.6 1,-0.1 -3,-0.3 -0.944 61.8-167.6-116.7 111.8 3.2 22.8 4.9 70 71 A R - 0 0 118 -2,-0.5 -6,-1.8 1,-0.2 2,-0.3 0.899 68.5 -19.5 -59.8 -54.1 4.2 19.2 4.6 71 72 A W E +F 63 0E 99 -8,-0.3 2,-0.3 -48,-0.1 -8,-0.2 -0.977 56.3 179.8-158.8 161.4 6.1 18.9 7.9 72 73 A E E -F 62 0E 26 -10,-1.8 -10,-2.2 -2,-0.3 2,-0.1 -0.957 38.3 -88.1-157.4 163.4 7.9 20.9 10.6 73 74 A Y E -F 61 0E 91 -2,-0.3 -55,-2.1 -12,-0.2 -54,-0.3 -0.351 49.5-110.4 -70.8 152.0 9.8 20.3 13.8 74 75 A c B -C 17 0C 9 -14,-2.6 2,-2.3 -57,-0.3 -57,-0.3 -0.556 31.1 -98.7 -88.1 153.7 7.7 20.3 17.0 75 76 A N S S+ 0 0 91 -59,-2.6 2,-0.3 -2,-0.2 -58,-0.1 -0.462 78.8 123.2 -76.8 72.6 7.8 23.0 19.7 76 77 A L - 0 0 32 -2,-2.3 2,-0.3 -16,-0.2 -74,-0.2 -0.956 53.7-133.8-135.4 156.2 10.1 21.2 22.0 77 78 A T E -a 2 0A 92 -76,-1.4 -74,-2.0 -2,-0.3 2,-0.5 -0.653 30.4-111.3-100.1 153.6 13.5 21.8 23.8 78 79 A R E a 3 0A 149 -2,-0.3 -74,-0.2 -76,-0.2 -76,-0.1 -0.775 360.0 360.0 -91.4 121.9 16.3 19.2 23.9 79 80 A a 0 0 70 -76,-3.6 -75,-0.2 -2,-0.5 -1,-0.2 0.972 360.0 360.0 -54.8 360.0 16.8 17.9 27.4