==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HORMONE 22-MAY-09 2KJ7 . COMPND 2 MOLECULE: ISLET AMYLOID POLYPEPTIDE; . SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; . AUTHOR R.NANGA,J.R.BRENDER,J.XU,K.HARTMAN,V.SUBRAMANIAN, . 37 1 1 1 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3628.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 17 45.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 13.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 12 32.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A K 0 0 173 0, 0.0 4,-0.1 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0 169.0 -6.5 -20.6 -1.6 2 2 A a - 0 0 74 2,-0.4 3,-0.1 3,-0.0 4,-0.0 0.891 360.0 -35.8 -94.9 -54.8 -4.9 -22.7 -4.4 3 3 A N S S+ 0 0 147 1,-0.3 2,-0.1 0, 0.0 3,-0.0 0.521 124.0 14.1-137.5 -46.8 -1.3 -23.1 -3.3 4 4 A T S > S- 0 0 74 1,-0.0 4,-0.6 0, 0.0 -2,-0.4 -0.391 86.3 -90.9-118.9-161.2 -0.1 -20.0 -1.5 5 5 A A H > S+ 0 0 43 2,-0.2 4,-5.9 -2,-0.1 5,-0.4 0.896 115.1 62.0 -83.3 -43.5 -1.8 -16.9 -0.0 6 6 A T H > S+ 0 0 77 2,-0.3 4,-3.0 1,-0.2 5,-0.2 0.926 97.8 56.7 -52.4 -47.4 -1.7 -14.7 -3.1 7 7 A a H 4 S+ 0 0 47 2,-0.2 4,-0.3 1,-0.2 -1,-0.2 0.958 123.3 28.8 -50.1 -45.3 -3.8 -17.0 -5.2 8 8 A A H >X S+ 0 0 22 -4,-0.6 3,-1.6 -3,-0.3 4,-0.7 0.950 122.9 50.0 -75.8 -52.9 -6.4 -16.5 -2.4 9 9 A T H 3X S+ 0 0 52 -4,-5.9 4,-4.5 1,-0.3 5,-0.3 0.666 84.8 91.1 -61.3 -17.3 -5.3 -13.1 -1.4 10 10 A Q H 3< S+ 0 0 130 -4,-3.0 4,-0.5 -5,-0.4 -1,-0.3 0.892 94.6 40.7 -51.1 -33.2 -5.5 -12.0 -5.1 11 11 A R H X> S+ 0 0 196 -3,-1.6 3,-0.7 -4,-0.3 4,-0.6 0.930 121.4 39.1 -81.8 -46.7 -9.1 -11.0 -4.3 12 12 A L H 3X S+ 0 0 25 -4,-0.7 4,-2.1 1,-0.2 3,-0.5 0.787 93.7 84.2 -75.4 -22.1 -8.4 -9.4 -0.8 13 13 A A H 3X S+ 0 0 27 -4,-4.5 4,-4.5 1,-0.3 5,-0.5 0.928 91.1 53.7 -42.5 -41.2 -5.2 -7.9 -2.0 14 14 A N H <> S+ 0 0 96 -3,-0.7 4,-2.6 -4,-0.5 5,-0.5 0.925 101.1 56.7 -56.5 -49.1 -7.7 -5.3 -3.2 15 15 A F H < S+ 0 0 133 -4,-0.6 -1,-0.3 -3,-0.5 -2,-0.2 0.854 120.6 31.1 -54.2 -34.8 -9.1 -5.0 0.3 16 16 A L H X S+ 0 0 79 -4,-2.1 4,-0.8 -3,-0.4 -2,-0.2 0.896 119.6 47.5 -93.4 -50.1 -5.6 -4.2 1.5 17 17 A V H >< S+ 0 0 98 -4,-4.5 3,-0.6 -5,-0.3 -3,-0.2 0.906 120.4 42.9 -61.4 -34.3 -4.0 -2.4 -1.5 18 18 A R T >< S+ 0 0 186 -4,-2.6 3,-2.8 -5,-0.5 -1,-0.3 0.796 97.4 76.1 -79.0 -27.3 -7.1 -0.4 -1.7 19 19 A S T >> S+ 0 0 52 -5,-0.5 3,-0.8 1,-0.3 4,-0.8 0.766 77.6 76.7 -55.4 -21.2 -7.1 -0.0 2.1 20 20 A S H