==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 29-MAY-09 2KJK . COMPND 2 MOLECULE: LIN2157 PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: LISTERIA INNOCUA; . AUTHOR X.WANG,K.HAMILTON,R.H.XIAO,D.LEE,C.H.CICCOSANTI,R.NAIR, . 100 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7835.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 57 57.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 27 27.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 10.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 10.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 9 9.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 1 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 211 0, 0.0 2,-1.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 0.4 -7.6 13.8 26.2 2 2 A V - 0 0 128 1,-0.1 2,-1.6 2,-0.0 0, 0.0 -0.560 360.0-172.3 -73.2 94.7 -5.2 11.3 24.6 3 3 A K - 0 0 177 -2,-1.3 -1,-0.1 2,-0.0 2,-0.1 -0.453 13.8-179.5 -87.3 63.1 -7.3 10.1 21.6 4 4 A V - 0 0 125 -2,-1.6 2,-0.2 1,-0.1 -2,-0.0 -0.426 15.3-142.7 -67.0 137.4 -5.0 7.3 20.6 5 5 A T + 0 0 125 -2,-0.1 3,-0.1 1,-0.0 -1,-0.1 -0.620 27.4 168.5 -99.3 160.7 -6.1 5.3 17.6 6 6 A Y + 0 0 203 -2,-0.2 2,-0.1 1,-0.1 -2,-0.0 -0.139 44.9 98.8-168.4 55.0 -5.8 1.6 17.0 7 7 A D + 0 0 132 24,-0.1 -1,-0.1 2,-0.0 -2,-0.0 -0.594 39.9 154.6-150.3 81.4 -7.9 0.6 13.9 8 8 A G - 0 0 26 -2,-0.1 2,-0.4 1,-0.1 33,-0.2 0.245 47.6 -82.5 -84.2-148.7 -5.9 0.2 10.7 9 9 A V E -A 30 0A 12 21,-0.8 21,-1.0 31,-0.1 2,-0.2 -0.986 34.3-135.4-127.8 134.6 -6.7 -2.0 7.6 10 10 A Y E -A 29 0A 119 -2,-0.4 80,-2.2 80,-0.3 2,-0.5 -0.622 16.9-127.2 -89.5 149.4 -6.0 -5.7 7.3 11 11 A V E -E 89 0B 14 17,-0.7 16,-0.7 -2,-0.2 78,-0.3 -0.838 11.6-163.1 -98.3 128.7 -4.5 -7.2 4.1 12 12 A L E - 0 0 107 76,-3.0 2,-0.3 -2,-0.5 77,-0.2 0.870 70.0 -23.0 -75.8 -39.9 -6.4 -10.2 2.6 13 13 A S E -E 88 0B 47 75,-1.1 75,-1.2 12,-0.1 2,-0.4 -0.983 49.2-138.5-167.6 161.0 -3.5 -11.3 0.4 14 14 A V E -E 87 0B 18 -2,-0.3 2,-0.9 73,-0.2 73,-0.2 -0.971 21.3-135.6-132.9 115.7 -0.2 -10.3 -1.4 15 15 A K - 0 0 128 71,-1.1 2,-3.5 -2,-0.4 6,-0.2 -0.601 19.6-137.7 -73.3 105.2 0.6 -11.5 -4.9 16 16 A E S S+ 0 0 168 -2,-0.9 -1,-0.1 1,-0.2 -2,-0.0 -0.279 91.9 66.8 -64.9 64.3 4.3 -12.5 -4.6 17 17 A D S S+ 0 0 146 -2,-3.5 -1,-0.2 69,-0.1 -2,-0.1 -0.037 82.3 83.2-176.0 45.7 5.1 -10.9 -8.0 18 18 A V S > S- 0 0 34 -3,-0.2 3,-2.9 1,-0.0 67,-0.1 -0.969 91.9 -93.2-150.2 160.9 4.6 -7.1 -7.5 19 19 A P T 3 S+ 0 0 51 0, 0.0 4,-0.1 0, 0.0 55,-0.0 0.829 123.5 63.9 -47.3 -33.3 6.7 -4.1 -6.1 20 20 A A T >> S+ 0 0 0 3,-0.1 4,-2.8 -5,-0.1 3,-2.1 0.731 78.9 107.2 -64.1 -22.8 4.9 -4.8 -2.7 21 21 A A B <4 S+f 24 0C 43 -3,-2.9 4,-0.1 1,-0.3 -5,-0.0 -0.427 87.4 14.4 -63.6 124.6 6.7 -8.2 -2.6 22 22 A G T 34 S+ 0 0 88 2,-0.5 -1,-0.3 -2,-0.2 3,-0.1 0.260 128.6 57.1 94.8 -9.7 9.5 -8.2 -0.0 23 23 A I T <4 S+ 0 0 56 -3,-2.1 2,-0.3 1,-0.4 -2,-0.2 0.728 107.9 32.8-114.3 -50.9 8.1 -4.9 1.6 24 24 A L B < -f 21 0C 13 -4,-2.8 -2,-0.5 4,-0.0 -1,-0.4 -0.842 66.2-173.2-113.2 148.4 4.5 -5.7 2.6 25 25 A H > - 0 0 109 -2,-0.3 3,-1.7 -4,-0.1 -14,-0.1 -0.965 36.4 -82.5-139.9 154.3 3.1 -9.1 3.7 26 26 A A T 3 S+ 0 0 39 -2,-0.3 -14,-0.1 1,-0.2 3,-0.1 -0.262 114.0 33.4 -57.4 139.7 -0.3 -10.5 4.5 27 27 A G T 3 S+ 0 0 52 -16,-0.7 -1,-0.2 1,-0.4 37,-0.2 0.291 87.6 133.3 94.6 -6.8 -1.6 -9.7 8.0 28 28 A D < - 0 0 1 -3,-1.7 -17,-0.7 35,-0.1 2,-0.5 -0.433 48.0-142.8 -74.5 150.9 0.2 -6.3 8.0 29 29 A L E -AB 10 62A 48 33,-0.9 33,-1.7 -19,-0.1 2,-0.4 -0.971 5.8-149.6-120.9 120.7 -1.8 -3.2 9.2 30 30 A I E -AB 9 61A 7 -21,-1.0 -21,-0.8 -2,-0.5 31,-0.3 -0.719 13.2-177.7 -89.4 134.6 -1.3 0.1 7.4 31 31 A T E - 0 0 52 29,-3.0 2,-0.3 -2,-0.4 30,-0.2 0.849 61.8 -13.1 -97.2 -49.2 -1.8 3.2 9.7 32 32 A E E - B 0 60A 45 28,-1.3 28,-3.2 5,-0.0 2,-0.4 -0.986 49.8-149.1-154.0 159.8 -1.3 6.2 7.3 33 33 A I E > S-CB 36 59A 7 3,-0.6 3,-3.2 -2,-0.3 26,-0.2 -0.997 81.0 -25.0-135.9 129.6 -0.0 7.1 3.8 34 34 A D T 3 S- 0 0 50 24,-2.3 3,-0.1 -2,-0.4 25,-0.1 0.675 109.1 -78.4 41.6 20.1 1.6 10.5 2.9 35 35 A G T 3 S+ 0 0 59 1,-0.3 2,-0.4 23,-0.2 -1,-0.3 0.566 98.3 140.4 69.2 6.6 -0.4 11.8 5.8 36 36 A Q B < +C 33 0A 87 -3,-3.2 -3,-0.6 8,-0.0 2,-0.3 -0.683 19.5 154.3 -86.8 134.5 -3.4 11.8 3.5 37 37 A S + 0 0 57 -2,-0.4 3,-0.1 -3,-0.1 -5,-0.0 -0.978 23.9 164.5-154.9 157.4 -6.8 10.7 5.0 38 38 A F S S- 0 0 133 -2,-0.3 2,-0.1 2,-0.3 -1,-0.1 0.394 76.2 -41.1-148.3 -26.1 -10.5 11.1 4.3 39 39 A K S S- 0 0 149 1,-0.4 2,-0.1 2,-0.0 0, 0.0 -0.346 92.9 -31.9-167.3-108.4 -12.2 8.4 6.3 40 40 A S S >> S- 0 0 71 -2,-0.1 3,-1.4 -3,-0.1 4,-0.5 0.034 98.4 -39.2-110.7-141.8 -11.3 4.6 6.8 41 41 A S H >> S+ 0 0 27 1,-0.3 3,-2.0 2,-0.2 4,-1.1 0.891 132.8 64.4 -56.2 -40.7 -9.6 2.0 4.6 42 42 A Q H 3> S+ 0 0 102 1,-0.3 4,-1.4 2,-0.2 -1,-0.3 0.787 89.1 69.6 -53.8 -28.7 -11.5 3.5 1.6 43 43 A E H <> S+ 0 0 20 -3,-1.4 4,-1.1 1,-0.2 -1,-0.3 0.853 97.8 50.3 -58.9 -35.3 -9.5 6.7 2.2 44 44 A F H XX S+ 0 0 14 -3,-2.0 4,-2.1 -4,-0.5 3,-0.7 0.937 102.8 57.0 -68.9 -47.5 -6.4 4.9 1.0 45 45 A I H 3X S+ 0 0 76 -4,-1.1 4,-1.0 1,-0.3 -1,-0.2 0.824 105.9 54.9 -52.7 -31.9 -8.0 3.6 -2.2 46 46 A D H 3X S+ 0 0 69 -4,-1.4 4,-1.4 2,-0.2 -1,-0.3 0.868 106.8 48.8 -71.0 -37.9 -8.6 7.3 -2.9 47 47 A Y H - 0 0 146 30,-0.1 3,-1.5 4,-0.1 22,-0.2 -0.897 33.6 -84.5-131.2 159.3 -0.6 9.0 -11.4 53 53 A V T 3 S+ 0 0 72 -2,-0.3 22,-0.1 28,-0.2 3,-0.1 -0.360 112.5 30.3 -64.6 140.4 1.6 6.1 -12.7 54 54 A G T 3 S+ 0 0 31 20,-0.5 -1,-0.2 1,-0.2 21,-0.1 0.211 95.6 117.7 94.3 -12.9 5.4 6.7 -12.2 55 55 A D < - 0 0 56 -3,-1.5 19,-1.3 18,-0.1 2,-0.3 0.164 61.3-118.8 -67.9-165.2 4.7 8.8 -9.1 56 56 A T E - D 0 73A 98 17,-0.2 2,-0.3 -3,-0.1 17,-0.2 -0.963 21.7-164.2-140.8 154.0 6.0 7.8 -5.6 57 57 A V E - D 0 72A 7 15,-0.8 2,-0.5 -2,-0.3 15,-0.5 -0.979 14.8-144.0-140.6 154.7 4.2 7.1 -2.2 58 58 A K E - D 0 71A 121 -2,-0.3 -24,-2.3 13,-0.2 2,-0.4 -0.970 20.2-163.6-121.7 112.4 5.1 6.8 1.5 59 59 A I E -BD 33 70A 8 11,-2.0 11,-1.1 -2,-0.5 2,-0.6 -0.811 7.7-153.4 -99.2 138.7 3.3 4.1 3.4 60 60 A K E +BD 32 69A 107 -28,-3.2 -29,-3.0 -2,-0.4 -28,-1.3 -0.947 35.9 143.3-111.2 113.3 3.1 4.0 7.2 61 61 A Y E -BD 30 68A 12 7,-1.7 7,-1.9 -2,-0.6 2,-0.5 -0.982 39.7-140.4-149.8 156.9 2.6 0.4 8.5 62 62 A K E -BD 29 67A 55 -33,-1.7 2,-1.0 -2,-0.3 -33,-0.9 -0.973 8.6-151.6-126.0 118.2 3.7 -1.8 11.4 63 63 A H E > S- D 0 66A 77 3,-1.0 3,-1.1 -2,-0.5 2,-0.7 -0.769 73.9 -42.4 -89.6 101.8 4.6 -5.5 10.9 64 64 A G T 3 S- 0 0 56 -2,-1.0 -2,-0.1 1,-0.2 -35,-0.0 -0.712 123.8 -23.1 83.8-111.9 3.8 -7.1 14.3 65 65 A N T 3 S+ 0 0 175 -2,-0.7 2,-0.4 2,-0.0 -1,-0.2 0.374 118.8 87.5-114.5 -2.4 5.0 -4.8 17.2 66 66 A K E < S-D 63 0A 118 -3,-1.1 -3,-1.0 0, 0.0 2,-0.6 -0.859 74.9-128.8-105.6 134.3 7.7 -2.9 15.2 67 67 A N E +D 62 0A 113 -2,-0.4 2,-0.3 -5,-0.2 -5,-0.2 -0.714 33.1 179.6 -84.1 119.6 7.0 0.3 13.2 68 68 A E E -D 61 0A 59 -7,-1.9 -7,-1.7 -2,-0.6 2,-0.4 -0.866 12.2-162.8-119.9 152.8 8.3 0.1 9.6 69 69 A E E +D 60 0A 140 -2,-0.3 2,-0.3 -9,-0.2 -9,-0.2 -0.999 13.9 165.8-139.8 133.5 8.2 2.5 6.7 70 70 A A E -D 59 0A 24 -11,-1.1 -11,-2.0 -2,-0.4 2,-0.4 -0.990 20.8-149.3-147.0 152.3 8.7 1.9 2.9 71 71 A S E -D 58 0A 70 -2,-0.3 2,-0.3 -13,-0.2 -13,-0.2 -0.973 14.6-171.4-125.4 136.5 8.1 3.7 -0.4 72 72 A I E -D 57 0A 17 -15,-0.5 -15,-0.8 -2,-0.4 2,-0.3 -0.947 28.2-109.7-128.7 149.1 7.4 2.0 -3.7 73 73 A K E -D 56 0A 129 -2,-0.3 -17,-0.2 -17,-0.2 -18,-0.1 -0.581 42.6-109.4 -78.4 136.3 7.1 3.3 -7.3 74 74 A L - 0 0 12 -19,-1.3 -20,-0.5 -2,-0.3 2,-0.3 -0.338 39.9-176.2 -66.7 147.3 3.6 3.3 -8.7 75 75 A T - 0 0 45 7,-0.1 9,-1.3 -22,-0.1 2,-0.3 -0.947 32.4 -94.9-140.9 160.7 2.7 0.7 -11.4 76 76 A A B +G 83 0D 67 -2,-0.3 3,-0.1 7,-0.2 10,-0.1 -0.630 43.7 161.1 -80.2 131.2 -0.3 -0.1 -13.6 77 77 A I + 0 0 88 5,-0.8 2,-0.2 -2,-0.3 -1,-0.2 0.730 58.1 43.7-114.0 -52.7 -2.5 -2.9 -12.2 78 78 A D S > S- 0 0 65 4,-0.4 3,-2.4 1,-0.1 4,-0.3 -0.580 91.0-102.5 -99.6 162.6 -5.9 -2.7 -13.9 79 79 A K T 3 S+ 0 0 216 1,-0.3 -1,-0.1 -2,-0.2 -3,-0.0 0.778 120.8 62.8 -51.1 -31.9 -6.8 -2.1 -17.5 80 80 A K T 3 S- 0 0 167 1,-0.0 -1,-0.3 2,-0.0 -4,-0.0 0.285 115.0-117.1 -80.2 12.1 -7.6 1.5 -16.7 81 81 A G < - 0 0 28 -3,-2.4 -28,-0.2 1,-0.2 -2,-0.2 0.926 46.2-178.0 52.7 49.1 -4.0 2.0 -15.7 82 82 A T - 0 0 21 -4,-0.3 -5,-0.8 -30,-0.1 -4,-0.4 -0.695 29.0-118.2 -80.3 120.4 -4.9 2.7 -12.1 83 83 A P B +G 76 0D 8 0, 0.0 2,-0.2 0, 0.0 -7,-0.2 -0.323 68.1 88.6 -58.7 134.8 -1.8 3.6 -10.0 84 84 A G S S- 0 0 3 -9,-1.3 -9,-0.0 -11,-0.1 -2,-0.0 -0.604 72.8 -88.4 148.8 152.5 -1.2 1.0 -7.1 85 85 A I - 0 0 30 -2,-0.2 2,-0.9 1,-0.1 -8,-0.1 -0.124 51.5 -95.5 -72.4 176.9 0.3 -2.3 -6.2 86 86 A G S S+ 0 0 21 -71,-0.2 -71,-1.1 -10,-0.1 2,-0.3 -0.739 75.5 115.1-103.3 86.9 -1.5 -5.6 -6.6 87 87 A I E -E 14 0B 37 -2,-0.9 2,-0.4 -73,-0.2 -73,-0.2 -0.930 53.3-131.9-143.7 166.9 -3.2 -6.4 -3.3 88 88 A T E -E 13 0B 74 -75,-1.2 -76,-3.0 -2,-0.3 -75,-1.1 -0.992 18.5-154.8-128.4 129.0 -6.6 -6.8 -1.7 89 89 A L E -E 11 0B 29 -2,-0.4 2,-0.4 -78,-0.3 -78,-0.2 -0.542 18.8-114.5 -97.9 163.2 -7.7 -5.2 1.6 90 90 A V + 0 0 44 -80,-2.2 -80,-0.3 -2,-0.2 -49,-0.1 -0.807 40.0 153.7-103.0 141.5 -10.5 -6.4 4.1 91 91 A D S S- 0 0 80 -2,-0.4 -1,-0.1 -82,-0.1 -2,-0.0 -0.237 73.8 -61.2-163.2 58.1 -13.6 -4.4 4.8 92 92 A D - 0 0 96 4,-0.0 4,-0.1 2,-0.0 0, 0.0 0.875 52.0-128.9 58.0 107.6 -16.4 -6.8 5.9 93 93 A L + 0 0 141 2,-0.1 3,-0.1 3,-0.0 0, 0.0 0.954 60.2 127.2 -47.2 -83.2 -17.2 -9.3 3.1 94 94 A E S S- 0 0 140 1,-0.2 -3,-0.0 2,-0.1 -2,-0.0 0.021 87.7 -65.2 49.9-165.5 -21.0 -9.0 2.9 95 95 A H - 0 0 183 2,-0.1 -1,-0.2 3,-0.0 -2,-0.1 0.695 59.0-156.8 -88.2 -21.0 -22.5 -8.4 -0.7 96 96 A H + 0 0 123 1,-0.1 2,-0.1 -4,-0.1 -2,-0.1 0.929 47.1 121.8 40.5 75.3 -20.9 -4.9 -0.9 97 97 A H + 0 0 114 1,-0.1 -1,-0.1 0, 0.0 -2,-0.1 -0.526 31.9 174.2-166.7 90.7 -23.3 -3.5 -3.5 98 98 A H S S- 0 0 184 2,-0.2 -1,-0.1 -2,-0.1 -2,-0.0 0.909 80.1 -60.5 -66.1 -42.8 -25.3 -0.3 -2.8 99 99 A H 0 0 162 1,-0.3 -1,-0.0 0, 0.0 0, 0.0 0.127 360.0 360.0-168.8 -55.1 -26.6 -0.3 -6.4 100 100 A H 0 0 223 0, 0.0 -1,-0.3 0, 0.0 -2,-0.2 -0.456 360.0 360.0 -60.6 360.0 -23.9 0.0 -9.1