==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 15-JUN-09 2KK4 . COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN AF_2094; . SOURCE 2 ORGANISM_SCIENTIFIC: ARCHAEOGLOBUS FULGIDUS; . AUTHOR A.LEMAK,A.YEE,B.WU,M.KARRA,T.RAMELOT,C.FARES,A.SEMESI, . 95 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7015.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 70 73.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 5 5.3 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 26 27.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 4 4.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 21 22.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 9.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 12 12.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A Q 0 0 179 0, 0.0 2,-0.3 0, 0.0 88,-0.1 0.000 360.0 360.0 360.0 147.4 10.8 -7.4 -11.4 2 2 A G - 0 0 19 86,-0.1 2,-0.2 89,-0.0 85,-0.1 -0.786 360.0 -84.7 106.5-153.4 13.3 -8.0 -8.4 3 3 A H - 0 0 25 -2,-0.3 3,-0.2 47,-0.0 2,-0.1 -0.858 30.6-102.2-144.9 176.3 13.2 -10.8 -5.8 4 4 A M S S+ 0 0 127 -2,-0.2 47,-0.4 1,-0.2 -2,-0.0 -0.400 89.4 49.3 -94.4 177.3 11.6 -11.7 -2.4 5 5 A D > + 0 0 84 -2,-0.1 3,-0.7 45,-0.1 -1,-0.2 0.875 56.8 157.6 55.6 47.8 13.2 -11.7 1.2 6 6 A L T 3 + 0 0 117 1,-0.2 3,-0.3 -3,-0.2 -1,-0.1 0.621 61.6 74.9 -71.5 -16.2 14.4 -8.0 0.8 7 7 A I T 3 S- 0 0 153 1,-0.3 -1,-0.2 44,-0.0 2,-0.2 0.857 120.9 -8.5 -65.5 -38.4 14.4 -7.8 4.6 8 8 A C < - 0 0 35 -3,-0.7 2,-0.5 43,-0.0 -1,-0.3 -0.702 66.7-155.4-167.1 102.1 17.7 -9.9 4.9 9 9 A M - 0 0 24 -3,-0.3 12,-2.1 -2,-0.2 2,-0.6 -0.750 27.8-121.8 -82.5 126.8 19.3 -11.8 1.9 10 10 A Y E -Ab 20 52A 117 41,-1.9 43,-2.1 -2,-0.5 2,-0.6 -0.598 22.8-140.8 -76.5 111.9 21.4 -14.8 3.1 11 11 A V E -Ab 19 53A 0 8,-1.1 8,-2.3 -2,-0.6 7,-1.7 -0.665 19.4-169.9 -80.2 111.7 25.0 -14.3 1.9 12 12 A F E -Ab 17 54A 60 41,-2.3 43,-2.7 -2,-0.6 2,-1.5 -0.931 22.9-139.0-103.0 124.6 26.5 -17.7 0.7 13 13 A K E > S-Ab 16 55A 72 3,-1.9 3,-1.5 -2,-0.5 2,-1.2 -0.679 78.6 -57.2 -77.7 85.4 30.2 -17.9 -0.1 14 14 A G T 3 S- 0 0 38 41,-2.3 -2,-0.1 -2,-1.5 42,-0.1 -0.623 122.8 -19.0 74.9 -95.0 29.6 -20.1 -3.1 15 15 A E T 3 S+ 0 0 194 -2,-1.2 -1,-0.3 39,-0.1 2,-0.2 0.645 120.7 89.6-110.6 -30.2 27.7 -23.0 -1.4 16 16 A E E < S-A 13 0A 111 -3,-1.5 -3,-1.9 1,-0.1 2,-0.7 -0.469 86.8-109.5 -77.6 141.0 28.8 -22.4 2.2 17 17 A S E +A 12 0A 88 -5,-0.2 -5,-0.2 1,-0.2 -1,-0.1 -0.621 43.1 171.5 -70.7 108.8 26.6 -20.1 4.5 18 18 A F E - 0 0 46 -7,-1.7 2,-0.2 -2,-0.7 -6,-0.2 0.929 48.5 -76.2 -85.3 -55.6 28.9 -17.0 5.0 19 19 A G E -A 11 0A 16 -8,-2.3 -8,-1.1 14,-0.1 2,-0.3 -0.813 50.4 -67.9-175.2-146.9 26.5 -14.6 6.7 20 20 A E E -AC 10 32A 95 12,-1.3 12,-2.4 -10,-0.2 2,-0.7 -0.975 38.8-107.8-140.1 145.3 23.6 -12.1 6.2 21 21 A S E + C 0 31A 26 -12,-2.1 10,-0.2 -2,-0.3 -12,-0.2 -0.671 48.7 152.3 -77.0 111.9 23.1 -8.8 4.4 22 22 A I E + 0 0 84 8,-1.9 2,-0.3 -2,-0.7 -1,-0.2 0.747 63.8 1.8-107.7 -40.4 22.8 -6.1 7.2 23 23 A D E - C 0 30A 33 7,-1.7 7,-1.5 2,-0.0 -1,-0.4 -0.934 52.8-152.1-148.4 160.7 24.0 -2.9 5.4 24 24 A V E + C 0 29A 25 -2,-0.3 2,-0.4 5,-0.2 5,-0.2 -0.945 18.6 170.3-139.6 118.8 25.4 -1.6 1.9 25 25 A Y E > - C 0 28A 15 3,-2.3 3,-2.0 -2,-0.3 2,-0.1 -0.995 57.3 -48.8-132.5 127.0 27.8 1.4 1.6 26 26 A G T 3 S- 0 0 51 -2,-0.4 0, 0.0 1,-0.3 0, 0.0 -0.288 122.7 -13.5 60.0-119.8 29.6 2.4 -1.6 27 27 A D T 3 S+ 0 0 119 -2,-0.1 15,-1.5 2,-0.0 2,-0.4 0.061 121.7 87.3-102.2 22.8 31.3 -0.6 -3.3 28 28 A Y E < -CD 25 41A 71 -3,-2.0 -3,-2.3 13,-0.2 2,-0.7 -0.986 62.4-150.6-133.3 124.9 30.9 -2.8 -0.2 29 29 A L E -CD 24 40A 13 11,-2.7 11,-2.1 -2,-0.4 2,-0.8 -0.861 25.9-137.1 -85.2 109.6 28.1 -5.1 0.9 30 30 A I E -CD 23 39A 0 -7,-1.5 -8,-1.9 -2,-0.7 -7,-1.7 -0.656 23.6-167.6 -70.8 107.1 28.3 -5.1 4.8 31 31 A V E -CD 21 38A 0 7,-2.1 7,-2.5 -2,-0.8 2,-0.6 -0.920 16.8-136.4-101.6 119.3 27.8 -8.8 5.7 32 32 A K E +CD 20 37A 51 -12,-2.4 -12,-1.3 -2,-0.6 2,-0.4 -0.695 31.1 175.9 -76.0 113.7 27.1 -9.6 9.4 33 33 A V E > - D 0 36A 21 3,-2.4 3,-1.4 -2,-0.6 2,-1.1 -0.993 56.2 -44.8-125.3 126.6 29.3 -12.7 10.2 34 34 A G T 3 S- 0 0 74 -2,-0.4 -2,-0.1 1,-0.3 3,-0.0 -0.336 123.1 -27.9 60.0 -91.4 29.5 -14.2 13.8 35 35 A T T 3 S+ 0 0 131 -2,-1.1 -1,-0.3 0, 0.0 2,-0.1 0.533 127.9 59.5-125.2 -23.8 30.1 -11.0 15.9 36 36 A E E < S-D 33 0A 88 -3,-1.4 -3,-2.4 -5,-0.0 2,-0.5 -0.355 79.9-107.3-110.8 179.2 31.7 -8.6 13.3 37 37 A F E -D 32 0A 46 -5,-0.2 2,-0.8 27,-0.2 -5,-0.2 -0.947 20.2-162.4-119.2 110.4 31.0 -7.1 9.9 38 38 A L E -D 31 0A 13 -7,-2.5 -7,-2.1 -2,-0.5 2,-1.2 -0.851 11.7-152.4 -91.5 105.9 32.8 -8.4 6.7 39 39 A A E -D 30 0A 0 24,-2.0 -9,-0.3 -2,-0.8 27,-0.1 -0.682 16.1-161.7 -83.2 92.5 32.4 -5.7 4.0 40 40 A V E -D 29 0A 0 -11,-2.1 -11,-2.7 -2,-1.2 5,-0.1 -0.562 18.5-115.5 -80.2 134.7 32.6 -7.8 0.8 41 41 A P E >> -D 28 0A 23 0, 0.0 3,-1.7 0, 0.0 4,-0.9 -0.335 23.1-115.7 -65.6 154.4 33.4 -5.9 -2.5 42 42 A K T 34 S+ 0 0 108 -15,-1.5 -14,-0.1 1,-0.3 -2,-0.0 0.772 114.3 66.7 -63.2 -28.1 30.7 -5.9 -5.3 43 43 A K T 34 S+ 0 0 182 -16,-0.2 -1,-0.3 1,-0.2 14,-0.2 0.689 96.8 56.0 -65.7 -21.9 33.1 -8.0 -7.6 44 44 A S T <4 S+ 0 0 2 -3,-1.7 12,-1.8 12,-0.1 2,-0.3 0.906 86.1 89.5 -74.3 -43.6 32.7 -10.8 -5.0 45 45 A I E < +E 55 0A 38 -4,-0.9 10,-0.3 10,-0.2 3,-0.1 -0.394 53.8 178.1 -61.7 112.5 28.8 -10.9 -5.4 46 46 A K E - 0 0 148 8,-2.2 2,-0.3 -2,-0.3 9,-0.2 0.964 61.4 -8.8 -78.5 -63.1 28.1 -13.3 -8.3 47 47 A S E -E 54 0A 38 7,-1.2 7,-2.0 42,-0.0 2,-0.8 -0.999 58.6-127.4-146.0 132.8 24.3 -13.3 -8.5 48 48 A V E -E 53 0A 28 -2,-0.3 5,-0.2 5,-0.2 2,-0.1 -0.766 37.3-163.4 -77.7 109.6 21.4 -11.9 -6.4 49 49 A E E > -E 52 0A 33 3,-1.8 2,-1.7 -2,-0.8 3,-0.8 -0.345 41.0 -71.0 -86.2 174.3 19.2 -15.0 -5.8 50 50 A D T 3 S- 0 0 53 1,-0.3 -45,-0.1 -2,-0.1 3,-0.1 -0.520 121.4 -18.8 -74.6 86.5 15.6 -15.0 -4.6 51 51 A G T 3 S+ 0 0 1 -2,-1.7 -41,-1.9 -47,-0.4 2,-0.3 0.578 128.8 87.1 88.2 13.4 16.3 -13.9 -1.0 52 52 A R E < -bE 10 49A 98 -3,-0.8 -3,-1.8 -43,-0.3 2,-0.4 -0.934 62.5-145.1-135.6 159.7 20.0 -14.9 -1.1 53 53 A I E -bE 11 48A 13 -43,-2.1 -41,-2.3 -2,-0.3 2,-0.7 -0.934 13.1-159.1-124.2 104.0 23.4 -13.3 -2.2 54 54 A V E -bE 12 47A 34 -7,-2.0 -8,-2.2 -2,-0.4 -7,-1.2 -0.780 17.2-179.1 -79.1 116.4 25.9 -15.8 -3.7 55 55 A I E -bE 13 45A 0 -43,-2.7 -41,-2.3 -2,-0.7 -10,-0.2 -0.742 12.2-157.1-105.9 164.0 29.4 -14.3 -3.4 56 56 A G - 0 0 11 -12,-1.8 2,-0.3 1,-0.3 -1,-0.2 0.561 50.4 -30.6-104.4-107.0 32.5 -15.9 -4.7 57 57 A E + 0 0 174 -14,-0.2 -1,-0.3 -13,-0.1 2,-0.3 -0.851 58.2 157.8-122.7 156.8 36.0 -15.1 -3.4 58 58 A F - 0 0 30 -2,-0.3 2,-1.1 -3,-0.1 3,-0.1 -0.956 54.1 -80.1-167.1 160.2 37.5 -11.9 -1.9 59 59 A D > - 0 0 102 -2,-0.3 4,-2.6 1,-0.2 5,-0.2 -0.688 44.2-169.6 -75.2 98.2 40.4 -10.7 0.3 60 60 A E H > S+ 0 0 122 -2,-1.1 4,-1.6 1,-0.2 -1,-0.2 0.865 81.6 51.4 -60.2 -43.3 38.8 -11.5 3.7 61 61 A E H > S+ 0 0 114 2,-0.2 4,-1.7 1,-0.2 -1,-0.2 0.834 113.5 46.1 -67.9 -33.9 41.4 -9.7 5.9 62 62 A E H > S+ 0 0 109 2,-0.2 4,-2.4 1,-0.2 5,-0.4 0.952 112.2 49.2 -69.6 -49.4 41.0 -6.5 3.7 63 63 A A H < S+ 0 0 3 -4,-2.6 -24,-2.0 1,-0.2 4,-0.3 0.780 112.5 52.0 -59.0 -28.5 37.1 -6.8 3.8 64 64 A R H X S+ 0 0 84 -4,-1.6 4,-1.9 -26,-0.2 -1,-0.2 0.889 110.5 44.2 -74.6 -45.3 37.5 -7.2 7.6 65 65 A E H X S+ 0 0 93 -4,-1.7 4,-1.0 2,-0.2 -2,-0.2 0.849 118.3 42.6 -75.4 -36.9 39.7 -4.0 8.2 66 66 A L H X S+ 0 0 21 -4,-2.4 4,-0.8 2,-0.2 -1,-0.2 0.614 110.2 61.1 -81.8 -15.1 37.6 -1.7 5.9 67 67 A G H > S+ 0 0 0 -5,-0.4 4,-1.3 -4,-0.3 -2,-0.2 0.909 108.7 39.8 -66.5 -47.8 34.7 -3.4 7.6 68 68 A R H X S+ 0 0 149 -4,-1.9 4,-0.7 2,-0.2 -2,-0.2 0.704 109.5 60.7 -76.3 -21.5 35.9 -2.1 11.0 69 69 A K H X S+ 0 0 84 -4,-1.0 4,-2.0 2,-0.2 -1,-0.2 0.812 104.5 49.8 -68.2 -32.9 36.8 1.2 9.2 70 70 A W H X S+ 0 0 27 -4,-0.8 4,-2.3 2,-0.2 -2,-0.2 0.880 102.1 60.3 -67.1 -40.5 33.0 1.2 8.4 71 71 A L H < S+ 0 0 54 -4,-1.3 -2,-0.2 1,-0.2 -1,-0.2 0.738 110.0 44.2 -57.9 -24.9 32.5 0.6 12.2 72 72 A E H >< S+ 0 0 152 -4,-0.7 3,-1.1 -3,-0.1 -2,-0.2 0.911 116.3 42.7 -79.3 -50.5 34.3 4.0 12.6 73 73 A E H >< S+ 0 0 70 -4,-2.0 3,-1.5 1,-0.2 -2,-0.2 0.671 95.1 78.3 -75.8 -19.1 32.5 6.0 9.9 74 74 A K T 3< S+ 0 0 108 -4,-2.3 -1,-0.2 1,-0.3 -3,-0.1 0.594 70.0 87.4 -66.6 -12.8 29.0 4.7 10.7 75 75 A S T < + 0 0 96 -3,-1.1 -1,-0.3 -5,-0.2 -2,-0.1 0.656 68.0 98.2 -60.5 -20.8 28.9 7.2 13.7 76 76 A K S < S- 0 0 152 -3,-1.5 3,-0.1 1,-0.1 -3,-0.0 -0.404 91.4 -92.2 -64.9 146.1 27.5 9.8 11.1 77 77 A P - 0 0 113 0, 0.0 2,-0.9 0, 0.0 3,-0.1 -0.278 52.3 -85.4 -65.5 152.0 23.6 10.2 11.2 78 78 A V S S+ 0 0 146 1,-0.2 -4,-0.0 -3,-0.1 -3,-0.0 -0.406 84.7 116.6 -69.4 97.1 21.5 8.1 8.8 79 79 A T + 0 0 124 -2,-0.9 2,-0.7 -3,-0.1 -1,-0.2 0.187 32.7 129.5-137.2 6.9 21.4 9.9 5.4 80 80 A L + 0 0 91 1,-0.2 4,-0.2 -3,-0.1 3,-0.2 -0.562 25.9 171.0 -69.5 108.9 23.2 7.1 3.4 81 81 A E > + 0 0 105 -2,-0.7 3,-1.0 1,-0.2 -1,-0.2 0.645 61.1 80.6 -96.3 -19.1 20.8 6.7 0.4 82 82 A E T 3 S+ 0 0 123 1,-0.3 -1,-0.2 3,-0.0 -57,-0.1 0.635 80.7 68.8 -69.1 -19.5 23.2 4.4 -1.6 83 83 A L T 3 S+ 0 0 69 -3,-0.2 2,-1.0 1,-0.1 -1,-0.3 0.915 80.2 86.7 -58.7 -47.3 22.1 1.4 0.6 84 84 A K < + 0 0 162 -3,-1.0 2,-0.4 -4,-0.2 -1,-0.1 -0.447 57.8 158.3 -64.8 94.7 18.6 1.7 -1.1 85 85 A S - 0 0 89 -2,-1.0 -3,-0.0 1,-0.1 -2,-0.0 -0.961 41.8-138.7-118.6 141.9 19.0 -0.5 -4.2 86 86 A Y - 0 0 137 -2,-0.4 -1,-0.1 -84,-0.0 -2,-0.0 0.827 36.8-120.5 -68.3 -32.3 16.0 -2.0 -6.0 87 87 A G - 0 0 21 -85,-0.1 -1,-0.0 1,-0.0 -2,-0.0 0.900 37.6-178.5 78.9 59.2 17.7 -5.4 -6.7 88 88 A F + 0 0 152 -86,-0.1 2,-1.7 1,-0.1 -86,-0.1 0.451 42.2 120.5 -72.8 -0.9 17.3 -5.1 -10.5 89 89 A G + 0 0 28 1,-0.2 -1,-0.1 -88,-0.1 -42,-0.0 -0.504 33.9 172.7 -69.0 86.4 19.0 -8.6 -10.8 90 90 A E + 0 0 122 -2,-1.7 -1,-0.2 -89,-0.1 4,-0.1 0.705 60.2 72.2 -70.1 -24.1 16.0 -10.3 -12.6 91 91 A E + 0 0 150 -3,-0.1 2,-0.3 4,-0.1 -43,-0.1 -0.240 59.6 103.0 -79.1 174.1 18.3 -13.3 -13.1 92 92 A G S S- 0 0 32 -43,-0.1 -43,-0.2 -45,-0.1 -2,-0.1 -0.996 86.1 -12.8 153.5-146.5 19.3 -15.8 -10.4 93 93 A E S S- 0 0 108 -2,-0.3 2,-0.3 1,-0.1 -44,-0.1 0.687 131.4 -6.3 -57.4 -24.0 18.5 -19.3 -9.2 94 94 A G 0 0 44 -4,-0.1 -1,-0.1 0, 0.0 -44,-0.0 -0.961 360.0 360.0-161.8 174.1 15.4 -19.0 -11.5 95 95 A S 0 0 184 -2,-0.3 -4,-0.1 -4,-0.1 -5,-0.0 -0.834 360.0 360.0-142.9 360.0 13.4 -16.7 -13.7