==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER MEMBRANE PROTEIN 01-JUL-09 2KLD . COMPND 2 MOLECULE: POLYCYSTIN-2; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR H.R.KALBITZER . 72 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5997.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 37 51.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 3 4.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 11.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 8.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 18 25.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 724 A D 0 0 89 0, 0.0 8,-0.1 0, 0.0 3,-0.0 0.000 360.0 360.0 360.0 -38.0 -2.2 9.5 0.5 2 725 A I + 0 0 160 2,-0.0 2,-0.2 0, 0.0 7,-0.1 0.980 360.0 17.7 -66.9 -45.2 -2.6 9.7 -3.3 3 726 A S S S- 0 0 62 5,-0.1 2,-0.6 0, 0.0 19,-0.1 -0.681 91.9-123.2-112.7 165.0 -6.0 11.0 -2.7 4 727 A E + 0 0 163 -2,-0.2 5,-0.1 1,-0.1 6,-0.1 -0.801 46.6 143.5-122.8 100.9 -7.0 12.5 0.6 5 728 A S S S- 0 0 48 -2,-0.6 -1,-0.1 1,-0.1 16,-0.1 0.883 70.8 -74.3 -85.9 -82.5 -10.0 11.1 2.5 6 729 A L S > S- 0 0 133 0, 0.0 4,-0.9 0, 0.0 -1,-0.1 0.055 103.9 -4.5-141.4-104.1 -9.0 11.3 6.1 7 730 A R T 4>S+ 0 0 132 2,-0.2 5,-1.7 1,-0.2 10,-0.0 0.773 142.9 42.2 -69.6 -30.9 -6.5 9.0 8.0 8 731 A Q T 45S+ 0 0 0 3,-0.2 3,-0.4 1,-0.2 -1,-0.2 0.746 107.9 61.9 -85.8 -29.4 -6.1 6.9 4.8 9 732 A G T 45S+ 0 0 3 1,-0.3 -2,-0.2 -8,-0.1 -1,-0.2 0.748 129.7 1.8 -69.2 -22.8 -6.0 10.0 2.8 10 733 A G T <5S+ 0 0 37 -4,-0.9 -1,-0.3 2,-0.1 -2,-0.1 -0.569 126.0 36.1-166.5 91.2 -3.0 11.0 4.6 11 734 A G T 5S+ 0 0 6 -3,-0.4 2,-0.3 -2,-0.2 -3,-0.2 -0.424 101.8 3.8 168.0 -86.8 -1.5 8.8 7.1 12 735 A K < - 0 0 16 -5,-1.7 2,-0.5 39,-0.1 36,-0.2 -0.865 59.0-129.0-131.3 162.1 -1.4 5.1 7.0 13 736 A L E +A 47 0A 39 34,-0.7 34,-3.2 -2,-0.3 33,-1.6 -0.948 29.3 166.4-120.0 128.7 -2.5 2.5 4.3 14 737 A N E > -A 46 0A 19 -2,-0.5 4,-1.3 32,-0.3 32,-0.3 -0.835 40.6-126.5-129.3 164.8 -4.7 -0.5 5.0 15 738 A F H > S+ 0 0 26 30,-0.5 4,-0.9 -2,-0.3 -1,-0.2 0.985 116.8 28.2 -69.2 -63.8 -6.6 -2.9 2.8 16 739 A D H 4 S+ 0 0 116 1,-0.2 4,-0.4 29,-0.2 3,-0.2 0.814 128.0 46.1 -63.9 -32.3 -9.9 -2.3 4.6 17 740 A E H >> S+ 0 0 22 1,-0.2 3,-1.4 2,-0.2 4,-0.6 0.822 99.9 68.2 -83.0 -27.4 -8.9 1.2 5.5 18 741 A L H >X S+ 0 0 25 -4,-1.3 4,-2.0 1,-0.3 3,-0.9 0.806 90.0 66.9 -55.8 -27.8 -7.6 1.8 1.9 19 742 A R H 3< S+ 0 0 34 -4,-0.9 -1,-0.3 1,-0.3 6,-0.2 0.885 87.0 67.7 -61.9 -34.2 -11.2 1.6 1.0 20 743 A Q H X4 S+ 0 0 51 -3,-1.4 3,-0.6 -4,-0.4 -1,-0.3 0.822 105.4 41.0 -53.6 -38.2 -11.7 4.7 3.0 21 744 A D H << S+ 0 0 26 -3,-0.9 -1,-0.2 -4,-0.6 -2,-0.2 0.933 129.7 26.7 -77.3 -48.3 -9.7 6.6 0.4 22 745 A L T >< S+ 0 0 45 -4,-2.0 3,-2.5 3,-0.1 2,-0.3 -0.303 80.8 168.0-107.4 41.3 -11.1 5.0 -2.6 23 746 A K T < S+ 0 0 167 -3,-0.6 3,-0.1 1,-0.3 -3,-0.1 -0.464 72.7 29.9 -61.7 120.2 -14.6 4.0 -1.2 24 747 A G T 3 S+ 0 0 81 1,-0.5 2,-0.4 -2,-0.3 -1,-0.3 0.258 93.8 119.7 111.4 -9.0 -16.7 3.0 -4.2 25 748 A K < + 0 0 107 -3,-2.5 -1,-0.5 -6,-0.2 -3,-0.1 -0.736 59.2 23.0 -91.2 137.6 -13.7 1.8 -6.2 26 749 A G - 0 0 34 -2,-0.4 3,-0.1 -3,-0.1 -2,-0.1 0.098 64.8-125.0 93.7 156.0 -13.6 -1.8 -7.2 27 750 A H S S+ 0 0 175 1,-0.5 2,-0.4 -2,-0.0 -3,-0.0 0.859 94.6 16.2 -97.8 -54.1 -16.3 -4.4 -7.7 28 751 A T S >> S- 0 0 81 1,-0.1 3,-0.9 0, 0.0 4,-0.7 -0.893 70.5-130.9-118.8 148.4 -15.1 -7.0 -5.5 29 752 A D H >> S+ 0 0 72 -2,-0.4 4,-2.8 1,-0.2 3,-0.6 0.804 103.8 70.9 -64.6 -31.5 -12.4 -6.7 -2.8 30 753 A A H 3> S+ 0 0 57 1,-0.2 4,-1.9 2,-0.2 -1,-0.2 0.810 93.3 57.0 -58.1 -30.2 -10.6 -9.8 -4.1 31 754 A E H <> S+ 0 0 94 -3,-0.9 4,-1.5 2,-0.2 -1,-0.2 0.880 111.9 40.7 -66.3 -40.2 -9.6 -7.6 -7.1 32 755 A I H S+ 0 0 90 -2,-0.5 4,-2.0 1,-0.1 5,-0.1 0.082 107.3 90.9 64.9 -18.0 2.1 3.9 11.2 50 773 A H H > S+ 0 0 114 -2,-0.5 4,-0.6 2,-0.2 -1,-0.1 0.911 99.4 34.0 -68.1 -44.1 5.1 2.1 9.5 51 774 A E H > S+ 0 0 9 1,-0.2 4,-1.3 2,-0.2 3,-0.4 0.821 115.0 60.4 -75.6 -37.7 4.5 4.0 6.3 52 775 A H H 4 S+ 0 0 55 1,-0.2 -2,-0.2 2,-0.2 -1,-0.2 0.839 97.9 56.8 -61.3 -40.7 3.4 7.0 8.2 53 776 A Q H < S+ 0 0 146 -4,-2.0 -1,-0.2 1,-0.2 -2,-0.2 0.811 105.4 51.4 -66.9 -27.2 6.8 7.3 10.0 54 777 A Q H < S- 0 0 72 -4,-0.6 -1,-0.2 -3,-0.4 -2,-0.2 0.856 85.4-164.9 -70.7 -39.3 8.6 7.5 6.6 55 778 A M < + 0 0 141 -4,-1.3 2,-0.4 -44,-0.2 -1,-0.1 0.130 66.5 76.6 73.3 -21.7 6.1 10.3 5.5 56 779 A R S S- 0 0 169 -5,-0.2 2,-0.7 3,-0.0 -1,-0.1 -0.954 93.3-111.3-120.1 137.0 7.4 9.7 2.0 57 780 A D > - 0 0 71 -2,-0.4 4,-0.5 1,-0.2 3,-0.1 -0.580 27.4-174.2 -74.0 112.3 6.3 6.8 -0.2 58 781 A D T 4 S+ 0 0 38 -2,-0.7 5,-0.3 1,-0.2 -1,-0.2 0.613 75.7 72.4 -82.0 -12.6 9.3 4.6 -0.6 59 782 A L T 4 S+ 0 0 79 1,-0.2 -1,-0.2 3,-0.1 -2,-0.0 0.925 93.1 54.1 -65.5 -47.3 7.5 2.3 -3.1 60 783 A E T 4 S+ 0 0 161 1,-0.1 2,-0.9 -3,-0.1 -1,-0.2 0.822 98.9 73.6 -56.0 -36.3 7.6 4.9 -5.8 61 784 A K < - 0 0 68 -4,-0.5 2,-1.5 1,-0.1 3,-0.3 -0.729 63.0-169.1 -88.1 106.9 11.4 5.1 -5.3 62 785 A E + 0 0 169 -2,-0.9 4,-0.1 1,-0.2 -1,-0.1 -0.488 31.7 146.3 -92.8 67.2 13.1 2.1 -6.7 63 786 A R + 0 0 176 -2,-1.5 2,-0.3 -5,-0.3 -1,-0.2 0.775 55.0 68.8 -71.3 -31.2 16.5 3.0 -5.1 64 787 A E S S- 0 0 154 -3,-0.3 2,-0.6 1,-0.0 0, 0.0 -0.732 89.2-117.4 -95.3 142.0 17.4 -0.7 -4.6 65 788 A D - 0 0 141 -2,-0.3 2,-0.8 1,-0.0 -2,-0.1 -0.682 19.5-137.3 -81.8 121.4 18.1 -3.0 -7.5 66 789 A L - 0 0 121 -2,-0.6 2,-0.1 -4,-0.1 4,-0.1 -0.677 29.2-154.7 -78.1 108.4 15.7 -5.8 -7.8 67 790 A D - 0 0 86 -2,-0.8 3,-0.1 2,-0.1 -1,-0.0 -0.272 23.1-115.5 -81.1 174.7 18.0 -8.7 -8.6 68 791 A L S S+ 0 0 168 1,-0.2 2,-0.5 -2,-0.1 -1,-0.1 0.946 103.7 42.7 -74.9 -50.3 17.2 -11.9 -10.4 69 792 A D - 0 0 102 1,-0.1 -1,-0.2 -3,-0.0 -2,-0.1 -0.856 57.3-179.5-101.8 129.6 17.8 -14.1 -7.4 70 793 A H - 0 0 113 -2,-0.5 2,-0.8 2,-0.3 -1,-0.1 -0.309 49.2-111.7-118.5 45.0 16.6 -13.1 -4.0 71 794 A S 0 0 106 1,-0.2 -1,-0.2 0, 0.0 0, 0.0 -0.470 360.0 360.0 63.8 -98.5 17.9 -16.1 -2.1 72 795 A S 0 0 167 -2,-0.8 -2,-0.3 -3,-0.1 -1,-0.2 0.846 360.0 360.0 -87.7 360.0 14.7 -17.9 -1.1