==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER MEMBRANE PROTEIN 01-JUL-09 2KLE . COMPND 2 MOLECULE: POLYCYSTIN-2; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR H.R.KALBITZER . 72 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6578.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 35 48.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 3 4.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 4.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 11.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 19 26.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 724 A D 0 0 187 0, 0.0 68,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -40.8 12.9 -3.1 13.7 2 725 A I + 0 0 111 68,-0.0 3,-0.1 0, 0.0 67,-0.0 0.782 360.0 66.0 -67.5 -27.1 10.3 -1.1 15.6 3 726 A S S S- 0 0 69 1,-0.2 6,-0.1 2,-0.0 7,-0.1 0.051 97.9 -30.1 -89.9-162.5 8.1 -0.5 12.6 4 727 A E - 0 0 110 5,-0.2 -1,-0.2 4,-0.1 17,-0.1 0.129 69.9 -89.5 -59.5 167.5 6.1 -2.8 10.3 5 728 A S - 0 0 63 -3,-0.1 16,-0.1 1,-0.1 -2,-0.0 0.813 48.8-109.1 -49.6 -73.5 6.7 -6.4 9.5 6 729 A L S > S+ 0 0 136 0, 0.0 4,-0.5 0, 0.0 -1,-0.1 -0.221 101.7 37.2 171.8 -72.5 9.0 -6.9 6.3 7 730 A R T 4>S+ 0 0 176 2,-0.2 5,-0.7 4,-0.1 10,-0.0 0.926 140.9 17.3 -71.2 -44.1 7.4 -8.3 3.2 8 731 A Q T >45S+ 0 0 1 3,-0.2 3,-1.0 1,-0.1 4,-0.5 0.915 129.1 51.2 -86.2 -58.3 4.2 -6.3 3.9 9 732 A G T 345S+ 0 0 17 1,-0.3 -5,-0.2 2,-0.1 -2,-0.2 0.450 119.3 39.0 -63.1 -3.6 5.6 -3.8 6.4 10 733 A G T 3<5S+ 0 0 58 -4,-0.5 -1,-0.3 2,-0.2 -2,-0.1 -0.326 125.4 14.7-145.1 58.1 8.4 -3.0 4.0 11 734 A G T < 5S- 0 0 38 -3,-1.0 2,-0.3 1,-0.1 -3,-0.2 -0.131 111.7 -5.3 179.2 -66.7 7.1 -2.9 0.5 12 735 A K < - 0 0 59 -5,-0.7 2,-0.4 -4,-0.5 36,-0.2 -0.956 51.0-129.7-151.0 161.9 3.5 -2.8 -0.3 13 736 A L E +A 47 0A 62 34,-1.3 34,-2.3 -2,-0.3 33,-1.7 -0.971 28.6 165.2-123.3 129.4 0.1 -2.9 1.4 14 737 A N E > -A 46 0A 27 -2,-0.4 4,-3.9 32,-0.3 32,-0.4 -0.936 45.7-118.0-135.8 149.0 -2.7 -5.2 0.3 15 738 A F H > S+ 0 0 10 30,-1.1 4,-1.2 -2,-0.3 -1,-0.2 0.994 121.4 32.9 -47.3 -60.6 -5.9 -6.2 2.1 16 739 A D H 4 S+ 0 0 115 1,-0.2 4,-0.2 2,-0.2 -1,-0.2 0.748 129.7 38.9 -67.9 -27.5 -4.8 -9.9 2.1 17 740 A E H >> S+ 0 0 66 2,-0.2 3,-1.7 1,-0.1 4,-0.5 0.802 105.1 64.6 -93.8 -33.5 -1.1 -8.9 2.4 18 741 A L H >X S+ 0 0 12 -4,-3.9 4,-2.0 1,-0.3 3,-1.2 0.787 91.1 70.3 -57.1 -28.3 -1.7 -6.0 4.8 19 742 A R H 3X S+ 0 0 35 -4,-1.2 4,-0.7 -5,-0.3 -1,-0.3 0.889 82.0 69.8 -58.0 -35.8 -2.8 -8.7 7.1 20 743 A Q H <4 S+ 0 0 38 -3,-1.7 3,-0.3 1,-0.3 -1,-0.3 0.861 108.3 38.0 -51.3 -31.9 0.8 -9.8 7.3 21 744 A D H << S+ 0 0 51 -3,-1.2 -1,-0.3 -4,-0.5 -2,-0.3 0.932 134.5 22.9 -80.0 -50.5 1.1 -6.6 9.2 22 745 A L H < S+ 0 0 67 -4,-2.0 2,-0.5 -5,-0.1 -2,-0.2 -0.326 81.6 174.2-114.6 44.2 -2.2 -6.8 11.1 23 746 A K < + 0 0 153 -4,-0.7 -3,-0.1 -3,-0.3 -4,-0.1 -0.411 60.9 19.1 -59.5 105.6 -2.8 -10.6 11.0 24 747 A G S S+ 0 0 69 -2,-0.5 -1,-0.1 3,-0.0 3,-0.1 0.821 78.8 107.9 101.4 91.1 -5.9 -11.3 13.0 25 748 A K + 0 0 108 1,-0.4 2,-0.1 2,-0.1 -2,-0.1 0.392 64.1 52.8-156.1 -38.1 -8.3 -8.6 13.9 26 749 A G - 0 0 33 1,-0.1 -1,-0.4 3,-0.0 3,-0.1 -0.424 69.2-125.3-107.1 179.7 -11.5 -8.8 12.1 27 750 A H S S+ 0 0 166 1,-0.4 2,-0.3 -2,-0.1 -1,-0.1 0.923 85.0 10.5 -90.9 -76.4 -14.1 -11.5 11.7 28 751 A T S >> S- 0 0 84 1,-0.1 4,-1.6 0, 0.0 3,-0.8 -0.807 72.3-121.3-106.7 148.5 -14.8 -12.1 8.1 29 752 A D H 3> S+ 0 0 77 -2,-0.3 4,-3.3 1,-0.2 5,-0.2 0.863 112.4 61.6 -54.8 -35.6 -12.7 -10.7 5.2 30 753 A A H 3> S+ 0 0 67 1,-0.2 4,-1.8 2,-0.2 -1,-0.2 0.860 103.2 48.3 -58.7 -42.6 -15.9 -9.0 3.9 31 754 A E H <> S+ 0 0 95 -3,-0.8 4,-2.1 2,-0.2 -1,-0.2 0.903 118.1 39.5 -64.2 -43.9 -16.3 -7.0 7.0 32 755 A I H X S+ 0 0 6 -4,-1.6 4,-2.2 2,-0.2 5,-0.2 0.865 112.8 55.6 -76.6 -38.3 -12.7 -5.8 7.0 33 756 A E H X S+ 0 0 100 -4,-3.3 4,-0.7 -5,-0.2 -1,-0.2 0.868 115.5 37.7 -63.1 -45.1 -12.6 -5.3 3.3 34 757 A A H X S+ 0 0 61 -4,-1.8 4,-1.2 -5,-0.2 3,-0.5 0.936 113.5 55.7 -69.7 -49.3 -15.5 -3.0 3.4 35 758 A I H >X S+ 0 0 87 -4,-2.1 4,-3.2 1,-0.3 3,-0.7 0.892 107.2 49.3 -55.3 -44.8 -14.7 -1.2 6.6 36 759 A F H 3X S+ 0 0 12 -4,-2.2 4,-2.5 1,-0.2 -1,-0.3 0.855 98.7 67.6 -67.0 -31.5 -11.2 -0.2 5.5 37 760 A T H 3< S+ 0 0 83 -4,-0.7 -1,-0.2 -3,-0.5 -2,-0.2 0.894 117.8 23.8 -59.1 -36.5 -12.6 1.2 2.2 38 761 A K H << S+ 0 0 170 -4,-1.2 -2,-0.2 -3,-0.7 -1,-0.2 0.897 137.9 28.7 -93.9 -46.7 -14.3 3.9 4.2 39 762 A Y H < S+ 0 0 177 -4,-3.2 -3,-0.2 -5,-0.2 -2,-0.2 0.627 94.3 101.7 -95.6 -18.2 -12.2 4.1 7.4 40 763 A D S < S- 0 0 34 -4,-2.5 0, 0.0 -5,-0.4 0, 0.0 -0.335 82.0-113.7 -64.6 154.8 -8.7 2.9 6.2 41 764 A Q S S+ 0 0 166 1,-0.2 -1,-0.1 2,-0.1 -4,-0.0 0.901 113.9 15.0 -54.9 -46.9 -6.1 5.5 5.6 42 765 A D S S- 0 0 67 0, 0.0 -1,-0.2 0, 0.0 -5,-0.1 0.630 86.1-143.6-108.6 -11.0 -6.0 4.9 1.9 43 766 A G S S+ 0 0 20 -7,-0.2 -6,-0.1 1,-0.1 -2,-0.1 0.644 84.4 87.0 57.5 14.0 -9.2 2.9 1.4 44 767 A D + 0 0 67 -8,-0.1 -29,-0.2 3,-0.0 -1,-0.1 0.854 50.2 164.3-104.5 -63.3 -7.3 0.9 -1.1 45 768 A Q + 0 0 12 -31,-0.1 -30,-1.1 1,-0.1 -31,-0.3 0.873 58.2 69.7 39.5 82.2 -5.5 -1.9 0.8 46 769 A E E +A 14 0A 123 -33,-1.7 2,-0.5 -32,-0.4 -32,-0.3 0.240 65.7 125.6 157.0 19.7 -4.4 -4.3 -2.0 47 770 A L E -A 13 0A 36 -34,-2.3 -34,-1.3 4,-0.0 -1,-0.1 -0.843 45.2-147.2-111.7 128.1 -1.7 -2.3 -3.9 48 771 A T > - 0 0 38 -2,-0.5 4,-3.0 -36,-0.2 5,-0.2 -0.369 31.2-105.8 -86.1 168.7 1.8 -3.6 -4.6 49 772 A E H > S+ 0 0 77 1,-0.2 4,-2.5 2,-0.2 5,-0.1 0.884 123.1 55.8 -58.0 -35.9 5.0 -1.7 -4.8 50 773 A H H > S+ 0 0 127 2,-0.2 4,-0.8 1,-0.2 -1,-0.2 0.879 111.8 40.8 -67.5 -36.6 4.9 -2.1 -8.5 51 774 A E H >> S+ 0 0 74 2,-0.2 4,-2.6 1,-0.2 3,-0.5 0.902 114.1 52.0 -77.4 -39.8 1.4 -0.6 -8.7 52 775 A H H 3< S+ 0 0 86 -4,-3.0 -2,-0.2 1,-0.2 -1,-0.2 0.862 102.9 62.4 -61.8 -35.4 2.3 2.1 -6.2 53 776 A Q H 3< S+ 0 0 139 -4,-2.5 -1,-0.2 -5,-0.2 -2,-0.2 0.852 113.6 32.6 -58.3 -38.9 5.3 2.9 -8.4 54 777 A Q H << S+ 0 0 136 -4,-0.8 -2,-0.2 -3,-0.5 -1,-0.2 0.891 119.6 46.3 -86.6 -43.6 3.1 3.8 -11.3 55 778 A M S < S+ 0 0 119 -4,-2.6 -3,-0.1 1,-0.0 2,-0.1 0.996 98.9 33.9 -78.0 -82.7 0.0 5.3 -9.6 56 779 A R - 0 0 110 -4,-0.2 2,-0.5 -5,-0.1 3,-0.2 -0.421 55.4-147.9 -86.6 160.1 0.3 7.9 -6.9 57 780 A D + 0 0 96 1,-0.2 4,-0.4 -2,-0.1 -1,-0.1 -0.805 35.3 148.9-124.1 80.8 2.8 10.5 -6.4 58 781 A D S > S+ 0 0 94 -2,-0.5 3,-1.5 2,-0.2 -1,-0.2 0.963 78.9 40.0 -78.7 -54.0 3.3 11.1 -2.6 59 782 A L G > S+ 0 0 121 1,-0.3 3,-0.8 2,-0.2 -1,-0.1 0.653 102.5 72.4 -74.3 -18.0 6.9 12.1 -2.5 60 783 A E G 3 S+ 0 0 141 1,-0.3 -1,-0.3 3,-0.0 -2,-0.2 0.859 115.9 23.7 -59.3 -31.5 6.5 14.1 -5.7 61 784 A K G < S+ 0 0 181 -3,-1.5 -1,-0.3 -4,-0.4 2,-0.3 -0.513 113.0 70.1-139.0 63.1 4.6 16.4 -3.4 62 785 A E < - 0 0 99 -3,-0.8 2,-0.5 -2,-0.1 -4,-0.0 -0.910 58.6-143.1-174.5 142.7 5.8 16.0 0.2 63 786 A R - 0 0 225 -2,-0.3 2,-0.1 -3,-0.0 -3,-0.0 -0.964 14.7-149.0-123.0 118.1 8.9 16.7 2.1 64 787 A E - 0 0 146 -2,-0.5 2,-0.2 -5,-0.1 -2,-0.0 -0.389 17.8-120.5 -78.5 156.0 10.2 14.4 4.8 65 788 A D - 0 0 143 -2,-0.1 2,-1.6 1,-0.0 -1,-0.1 -0.527 38.0 -92.9 -88.9 165.4 12.1 15.6 7.9 66 789 A L + 0 0 172 -2,-0.2 2,-0.2 2,-0.0 -1,-0.0 -0.633 65.3 159.6 -88.7 88.8 15.6 14.4 8.6 67 790 A D - 0 0 99 -2,-1.6 4,-0.0 1,-0.1 -3,-0.0 -0.449 39.9-140.5-103.3 178.0 14.8 11.4 10.8 68 791 A L - 0 0 168 -2,-0.2 -1,-0.1 2,-0.0 3,-0.1 0.828 65.2 -59.0-109.7 -51.3 16.9 8.4 11.8 69 792 A D S S- 0 0 106 1,-0.1 2,-0.3 -67,-0.0 -2,-0.1 0.143 103.7 -11.3-159.3 -76.3 14.5 5.3 11.9 70 793 A H + 0 0 71 -67,-0.0 -1,-0.1 2,-0.0 -2,-0.0 -0.953 56.4 163.1-139.7 149.9 11.5 5.4 14.3 71 794 A S 0 0 82 -2,-0.3 -1,-0.0 -3,-0.1 0, 0.0 -0.023 360.0 360.0-168.8 40.2 11.2 8.0 17.0 72 795 A S 0 0 147 0, 0.0 -2,-0.0 0, 0.0 0, 0.0 -0.651 360.0 360.0 -79.2 360.0 7.7 8.2 18.3