==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=10-APR-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSPORT PROTEIN 06-JUL-09 2KLN . COMPND 2 MOLECULE: PROBABLE SULPHATE-TRANSPORT TRANSMEMBRANE PROTEIN . SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM BOVIS; . AUTHOR A.K.SHARMA,L.YE,A.S.ZOLOTAREV,S.L.ALPER,A.C.RIGBY . 124 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8038.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 83 66.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 18 14.5 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 7.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 8.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 35 28.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 7 5.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 168 0, 0.0 2,-0.3 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0-176.1 -20.2 2.3 4.5 2 2 A H - 0 0 168 1,-0.1 4,-0.1 4,-0.1 0, 0.0 -0.987 360.0 -4.3-147.2 140.2 -17.7 2.1 7.3 3 3 A D S S+ 0 0 116 -2,-0.3 2,-3.0 2,-0.2 -1,-0.1 0.119 103.9 51.5 68.5 171.1 -14.8 -0.3 8.0 4 4 A I S S- 0 0 99 18,-1.2 19,-0.2 1,-0.1 -1,-0.1 -0.055 128.1 -32.0 63.2 -36.3 -13.8 -3.5 6.1 5 5 A D S S+ 0 0 96 -2,-3.0 -2,-0.2 16,-0.2 17,-0.2 -0.322 76.0 146.1-168.4-108.0 -13.7 -1.7 2.8 6 6 A D - 0 0 47 -4,-0.1 15,-0.1 1,-0.1 -4,-0.1 0.196 67.2 -68.4 66.7 166.4 -15.9 1.3 1.6 7 7 A Y - 0 0 202 1,-0.2 -1,-0.1 -6,-0.1 11,-0.0 -0.806 48.9-175.8 -94.4 100.7 -14.8 4.1 -0.7 8 8 A P - 0 0 60 0, 0.0 -1,-0.2 0, 0.0 10,-0.1 0.879 60.0 -67.7 -65.8 -41.5 -12.2 6.1 1.4 9 9 A Q - 0 0 105 10,-0.1 9,-0.1 8,-0.0 -2,-0.0 -0.096 48.0-162.2-172.5 -78.6 -11.6 8.8 -1.2 10 10 A A - 0 0 62 7,-1.2 8,-0.1 2,-0.1 6,-0.1 0.899 9.1-172.4 64.8 102.5 -9.9 8.2 -4.5 11 11 A K - 0 0 127 1,-0.3 2,-0.3 6,-0.1 5,-0.2 0.922 29.4-109.1 -86.3 -83.3 -8.7 11.4 -6.0 12 12 A R - 0 0 183 37,-0.2 -1,-0.3 2,-0.1 4,-0.2 -0.934 58.6 -34.5 172.8-161.3 -7.4 11.0 -9.6 13 13 A V S S+ 0 0 92 -2,-0.3 36,-2.9 2,-0.1 2,-0.4 0.907 127.0 46.0 -51.7 -50.9 -4.1 11.0 -11.5 14 14 A P S S+ 0 0 71 0, 0.0 36,-0.1 0, 0.0 -2,-0.1 -0.816 123.5 5.5 -94.8 136.7 -2.6 13.8 -9.3 15 15 A G S S+ 0 0 41 -2,-0.4 2,-0.3 34,-0.2 35,-0.2 0.830 84.6 161.6 71.0 36.4 -2.9 13.6 -5.5 16 16 A L E +a 50 0A 17 33,-2.3 35,-1.0 -3,-0.4 2,-0.3 -0.629 8.7 165.3 -93.0 144.9 -4.5 10.2 -5.2 17 17 A V E -a 51 0A 15 -2,-0.3 -7,-1.2 33,-0.2 2,-0.3 -0.933 10.1-176.0-158.5 135.1 -4.6 8.1 -2.0 18 18 A V E -a 52 0A 41 33,-1.6 35,-2.2 -2,-0.3 2,-0.3 -0.922 21.6-123.2-129.6 158.9 -6.5 5.1 -0.8 19 19 A Y E -a 53 0A 103 -2,-0.3 2,-0.8 33,-0.2 35,-0.3 -0.709 28.6-105.2-102.4 150.8 -6.6 3.2 2.4 20 20 A R E -a 54 0A 26 33,-1.7 35,-1.3 -2,-0.3 36,-0.3 -0.680 48.2-113.5 -73.4 107.7 -5.9 -0.5 3.1 21 21 A Y - 0 0 53 -2,-0.8 2,-1.3 1,-0.1 -16,-0.2 -0.108 21.9-129.4 -44.0 134.1 -9.4 -1.9 3.6 22 22 A D + 0 0 23 -17,-0.2 -18,-1.2 2,-0.1 -17,-0.2 -0.569 69.7 95.0 -97.3 72.1 -9.8 -3.1 7.2 23 23 A A S S- 0 0 21 -2,-1.3 2,-0.6 -19,-0.2 3,-0.1 -0.920 79.7-100.7-162.0 131.8 -11.1 -6.7 6.8 24 24 A P + 0 0 100 0, 0.0 38,-0.2 0, 0.0 37,-0.2 -0.380 54.6 143.8 -59.4 104.0 -9.5 -10.1 6.8 25 25 A L > - 0 0 47 36,-2.5 2,-0.8 -2,-0.6 3,-0.7 0.407 36.1-165.4-112.4 -8.8 -9.2 -11.2 3.2 26 26 A C B 3 -d 62 0B 54 35,-1.6 37,-1.7 1,-0.2 -1,-0.2 -0.469 46.8 -73.5 65.5-101.9 -5.9 -12.9 3.9 27 27 A F T 3> S+ 0 0 48 -2,-0.8 4,-0.6 35,-0.1 3,-0.4 0.259 83.4 132.1-173.9 4.9 -4.3 -13.6 0.4 28 28 A A T <4 S- 0 0 99 -3,-0.7 3,-0.1 1,-0.3 -2,-0.1 0.839 100.7 -2.8 -43.4 -58.7 -6.4 -16.5 -1.1 29 29 A N T > S+ 0 0 110 -4,-0.3 4,-2.5 1,-0.1 -1,-0.3 0.223 105.0 114.8-114.0 12.6 -6.9 -14.9 -4.5 30 30 A A H > + 0 0 1 -3,-0.4 4,-2.2 1,-0.2 5,-0.2 0.613 63.0 67.8 -66.8 -15.1 -5.1 -11.7 -3.4 31 31 A E H X S+ 0 0 101 -4,-0.6 4,-2.0 2,-0.2 -1,-0.2 0.999 115.4 22.6 -66.0 -66.7 -2.3 -12.2 -5.9 32 32 A D H > S+ 0 0 86 -3,-0.2 4,-3.3 1,-0.2 5,-0.2 0.813 123.8 59.8 -70.5 -29.7 -4.2 -11.7 -9.1 33 33 A F H X S+ 0 0 75 -4,-2.5 4,-2.3 2,-0.2 5,-0.3 0.943 106.3 45.2 -60.5 -49.9 -6.8 -9.7 -7.1 34 34 A R H X>S+ 0 0 12 -4,-2.2 4,-1.7 -5,-0.2 5,-0.7 0.920 116.6 47.8 -60.2 -44.8 -4.2 -7.2 -6.1 35 35 A R H X>S+ 0 0 101 -4,-2.0 4,-2.6 -5,-0.2 5,-0.5 0.993 111.7 47.4 -56.3 -65.5 -2.9 -7.0 -9.6 36 36 A R H X5S+ 0 0 156 -4,-3.3 4,-1.5 1,-0.2 -2,-0.2 0.867 118.9 38.2 -45.5 -54.9 -6.3 -6.7 -11.3 37 37 A A H X5S+ 0 0 36 -4,-2.3 4,-1.5 -5,-0.2 -1,-0.2 0.977 125.7 30.7 -68.0 -62.5 -7.6 -3.9 -9.0 38 38 A L H <5S+ 0 0 34 -4,-1.7 4,-0.4 -5,-0.3 -3,-0.2 0.892 119.9 53.4 -69.4 -38.7 -4.6 -1.7 -8.3 39 39 A T H X S+ 0 0 58 -2,-0.4 4,-1.6 1,-0.1 5,-0.4 0.784 77.8 148.2 61.0 28.5 1.1 -12.3 2.9 65 65 A A T 4> + 0 0 4 1,-0.2 5,-2.7 2,-0.2 4,-0.4 0.921 64.2 59.3 -59.1 -47.3 1.0 -8.6 1.9 66 66 A L T 4>S+ 0 0 40 3,-0.2 5,-0.9 4,-0.2 -1,-0.2 0.901 108.6 47.0 -50.3 -42.1 4.7 -8.5 1.4 67 67 A D T >5S+ 0 0 58 3,-0.2 4,-1.5 -3,-0.2 5,-0.3 0.988 130.6 12.9 -64.7 -76.7 4.5 -11.2 -1.2 68 68 A A H X5S+ 0 0 4 -4,-1.6 4,-1.9 2,-0.2 5,-0.3 0.989 138.0 35.8 -66.2 -61.1 1.6 -10.1 -3.4 69 69 A L H >5S+ 0 0 13 -4,-0.4 4,-1.9 -5,-0.4 -3,-0.2 0.898 122.0 42.0 -63.2 -46.3 1.1 -6.5 -2.3 70 70 A D H >XS+ 0 0 1 -5,-2.7 4,-2.2 2,-0.2 5,-0.6 0.838 109.6 57.2 -81.2 -31.4 4.8 -5.5 -1.6 71 71 A Q H X< S+ 0 0 21 -4,-1.6 3,-1.1 -3,-0.3 4,-0.4 0.739 115.6 61.9 -94.0 -25.8 5.8 -0.7 -9.6 77 77 A L H ><>S+ 0 0 11 -4,-3.1 3,-1.9 -5,-0.3 5,-0.5 0.938 98.8 55.9 -62.6 -47.2 6.1 2.2 -7.2 78 78 A R T 3<5S+ 0 0 137 -4,-1.9 -1,-0.3 1,-0.3 -2,-0.1 0.423 99.4 66.2 -67.7 3.6 9.7 2.7 -8.0 79 79 A R T < 5S- 0 0 185 -3,-1.1 -1,-0.3 -36,-0.2 -2,-0.2 0.616 114.5 -2.6 -99.6 -16.7 8.6 3.1 -11.6 80 80 A G T < 5S- 0 0 40 -3,-1.9 2,-0.8 -4,-0.4 -31,-0.1 -0.546 98.8 -53.7-147.6-150.1 6.6 6.3 -11.2 81 81 A I E 5S+b 49 0A 46 -33,-0.6 -31,-1.3 -2,-0.2 2,-0.3 -0.704 84.1 113.4-108.8 78.5 5.4 8.9 -8.7 82 82 A V E < -b 50 0A 15 -2,-0.8 -31,-0.3 -5,-0.5 2,-0.3 -0.961 37.7-173.3-143.2 154.4 3.7 6.8 -6.0 83 83 A F E -b 51 0A 63 -33,-1.4 -31,-1.4 -2,-0.3 2,-0.3 -0.852 6.5-154.7-139.8 178.4 4.3 6.0 -2.4 84 84 A A E -bc 52 109A 1 24,-0.6 26,-1.7 -2,-0.3 2,-0.3 -0.964 8.7-178.3-160.0 143.7 3.0 3.8 0.4 85 85 A M E -bc 53 110A 3 -33,-2.6 -31,-1.2 -2,-0.3 26,-0.3 -0.999 5.1-171.2-148.4 142.1 2.9 3.7 4.2 86 86 A A E - c 0 111A 0 24,-1.4 26,-2.0 -2,-0.3 -2,-0.0 -0.602 30.4-127.4-115.6-179.1 1.7 1.6 7.0 87 87 A R - 0 0 138 -2,-0.2 24,-0.1 24,-0.2 -34,-0.0 0.238 61.4 -98.0-112.8 8.6 1.4 2.1 10.8 88 88 A V + 0 0 64 1,-0.0 -29,-0.1 -29,-0.0 23,-0.0 0.971 64.3 152.7 72.6 85.9 3.3 -1.1 11.6 89 89 A K S S- 0 0 31 -31,-0.1 -1,-0.0 -30,-0.0 -30,-0.0 0.465 96.3 -44.0-109.4 -12.0 1.0 -4.0 12.4 90 90 A Q S >> S+ 0 0 98 0, 0.0 4,-2.3 0, 0.0 3,-0.9 0.075 112.7 112.7 169.6 -19.5 3.6 -6.5 11.2 91 91 A D H 3>>S+ 0 0 2 1,-0.3 4,-2.5 2,-0.2 5,-0.7 0.781 71.1 59.4 -45.2 -44.0 4.6 -4.7 8.0 92 92 A L H 3>5S+ 0 0 67 1,-0.2 4,-1.3 3,-0.2 -1,-0.3 0.942 113.7 36.1 -56.1 -48.5 8.1 -4.0 9.2 93 93 A R H <>5S+ 0 0 183 -3,-0.9 4,-1.6 2,-0.2 -2,-0.2 0.964 125.5 38.9 -70.7 -50.7 9.0 -7.6 9.7 94 94 A E H X5S+ 0 0 17 -4,-2.3 4,-1.6 2,-0.2 3,-0.2 0.965 119.3 43.0 -67.2 -55.1 7.1 -9.0 6.7 95 95 A S H X5S+ 0 0 4 -4,-2.5 4,-3.0 1,-0.2 -1,-0.2 0.871 114.9 50.9 -63.5 -38.1 7.8 -6.3 4.1 96 96 A L H << + 0 0 8 -4,-3.0 3,-0.7 1,-0.2 -1,-0.2 -0.721 63.2 158.6-103.9 85.0 12.0 -6.4 0.0 100 100 A S T > + 0 0 79 -2,-1.0 3,-1.1 -3,-0.3 -1,-0.2 0.482 59.1 88.1 -84.7 -1.6 15.3 -5.9 1.9 101 101 A L T >> + 0 0 50 1,-0.3 4,-1.9 2,-0.1 3,-1.8 0.343 53.7 106.5 -77.1 9.7 16.5 -3.5 -0.8 102 102 A L H <> + 0 0 31 -3,-0.7 4,-2.1 1,-0.3 -1,-0.3 0.775 62.7 75.6 -57.7 -26.4 14.8 -0.8 1.3 103 103 A D H <4 S+ 0 0 131 -3,-1.1 -1,-0.3 1,-0.2 -2,-0.1 0.843 108.9 25.4 -51.2 -37.9 18.3 0.1 2.2 104 104 A K H <4 S+ 0 0 137 -3,-1.8 -2,-0.2 2,-0.1 -1,-0.2 0.771 120.5 52.8-104.7 -32.0 18.8 1.7 -1.3 105 105 A I H < S+ 0 0 33 -4,-1.9 2,-0.4 1,-0.2 -3,-0.2 0.738 82.1 175.3 -77.9 -22.1 15.2 2.6 -2.3 106 106 A G >< + 0 0 34 -4,-2.1 3,-0.5 -5,-0.3 2,-0.3 -0.364 64.4 23.8 64.2-110.0 14.8 4.5 1.0 107 107 A E T 3 S+ 0 0 122 -2,-0.4 3,-0.3 1,-0.2 -1,-0.2 -0.010 92.0 109.0 -86.7 32.5 11.5 6.2 1.2 108 108 A D T 3 S- 0 0 10 -2,-0.3 -24,-0.6 1,-0.3 2,-0.4 0.984 95.7 -0.5 -66.9 -60.1 9.9 3.9 -1.4 109 109 A H E < S+c 84 0A 3 -3,-0.5 -1,-0.3 -26,-0.2 -24,-0.2 -0.889 90.2 137.8-140.1 102.7 7.6 2.0 1.1 110 110 A I E -c 85 0A 29 -26,-1.7 -24,-1.4 -2,-0.4 2,-0.4 -0.356 47.7 -79.5-129.5-157.3 7.8 3.1 4.7 111 111 A F E S-c 86 0A 55 -26,-0.3 -24,-0.2 1,-0.2 -26,-0.1 -0.971 84.8 -18.8-127.8 130.4 5.6 3.7 7.7 112 112 A M S S+ 0 0 112 -26,-2.0 -1,-0.2 -2,-0.4 -25,-0.1 0.927 98.7 95.0 45.1 83.9 3.5 6.8 8.7 113 113 A T >> + 0 0 45 -3,-0.1 4,-2.3 -27,-0.0 3,-1.1 0.344 48.5 89.0-160.1 -41.2 4.9 9.6 6.6 114 114 A L H 3> S+ 0 0 3 1,-0.2 4,-2.8 2,-0.2 5,-0.4 0.803 81.4 61.7 -47.6 -51.3 3.0 10.2 3.3 115 115 A P H 3> S+ 0 0 64 0, 0.0 4,-0.7 0, 0.0 -1,-0.2 0.875 119.5 27.7 -45.3 -46.7 0.3 12.7 4.6 116 116 A T H <> S+ 0 0 83 -3,-1.1 4,-1.9 2,-0.2 -2,-0.2 0.775 116.6 63.7 -87.7 -26.6 3.0 15.3 5.6 117 117 A A H X S+ 0 0 13 -4,-2.3 4,-3.3 1,-0.2 3,-0.3 0.963 105.2 42.8 -61.2 -54.1 5.4 14.0 2.9 118 118 A V H X S+ 0 0 44 -4,-2.8 4,-1.3 1,-0.2 -1,-0.2 0.846 108.9 61.4 -63.0 -32.4 3.3 15.0 -0.1 119 119 A Q H < S+ 0 0 119 -4,-0.7 -1,-0.2 -5,-0.4 5,-0.2 0.931 116.0 30.7 -57.5 -47.0 2.4 18.2 1.7 120 120 A A H >X S+ 0 0 34 -4,-1.9 4,-3.3 -3,-0.3 3,-1.4 0.923 120.0 50.6 -78.8 -46.4 6.1 19.2 1.6 121 121 A F H 3< S+ 0 0 95 -4,-3.3 -2,-0.2 1,-0.3 -3,-0.2 0.536 109.5 51.3 -77.9 -6.1 7.2 17.5 -1.6 122 122 A R T 3< S+ 0 0 145 -4,-1.3 -1,-0.3 -5,-0.2 -2,-0.1 0.302 127.7 19.9-108.6 8.3 4.4 18.9 -3.7 123 123 A R T <4 0 0 185 -3,-1.4 -2,-0.2 -5,-0.1 -3,-0.2 0.524 360.0 360.0-139.3 -43.0 5.0 22.5 -2.7 124 124 A R < 0 0 198 -4,-3.3 -3,-0.1 -5,-0.2 -4,-0.1 0.993 360.0 360.0 58.8 360.0 8.6 22.8 -1.3