==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=6-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER LIPID BINDING PROTEIN 17-DEC-01 1KMR . COMPND 2 MOLECULE: PULMONARY SURFACTANT-ASSOCIATED PROTEIN B; . SOURCE 2 SYNTHETIC: YES; . AUTHOR J.W.KURUTZ,K.Y.C.LEE . 15 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 1509.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 8 53.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 7 46.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 6.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 11 A C 0 0 142 0, 0.0 2,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 115.6 -4.9 -6.9 0.5 2 12 A R > - 0 0 170 0, 0.0 4,-1.4 0, 0.0 0, 0.0 -0.074 360.0 -18.0-139.6-132.3 -1.4 -7.6 2.2 3 13 A A H > S+ 0 0 68 2,-0.2 4,-1.1 1,-0.2 3,-0.1 0.957 128.9 27.1 -66.3 -63.0 2.3 -6.6 2.4 4 14 A L H > S+ 0 0 101 2,-0.2 4,-3.1 1,-0.2 5,-0.2 0.748 114.5 67.2 -73.0 -30.3 3.3 -4.6 -0.8 5 15 A I H > S+ 0 0 42 2,-0.2 4,-2.6 1,-0.2 -2,-0.2 0.903 103.4 46.1 -48.0 -44.8 -0.4 -3.5 -1.0 6 16 A K H X S+ 0 0 93 -4,-1.4 4,-2.1 2,-0.2 -2,-0.2 0.813 110.1 53.1 -71.7 -31.0 0.6 -1.6 2.3 7 17 A R H X S+ 0 0 156 -4,-1.1 4,-1.4 2,-0.2 -2,-0.2 0.973 115.1 40.7 -56.2 -56.3 3.9 -0.3 0.6 8 18 A I H X S+ 0 0 81 -4,-3.1 4,-2.7 2,-0.2 3,-0.3 0.920 117.3 48.7 -57.0 -45.9 1.7 1.1 -2.4 9 19 A Q H <>S+ 0 0 47 -4,-2.6 5,-2.2 2,-0.3 6,-0.3 0.865 101.7 62.3 -70.1 -33.8 -1.1 2.3 0.1 10 20 A A H <5S+ 0 0 53 -4,-2.1 -1,-0.2 4,-0.2 -2,-0.2 0.907 117.5 32.2 -47.7 -43.0 1.6 4.0 2.2 11 21 A M H <5S+ 0 0 141 -4,-1.4 -2,-0.3 -3,-0.3 -1,-0.2 0.874 125.7 44.0 -72.6 -47.0 2.2 6.1 -1.1 12 22 A I T <5S- 0 0 124 -4,-2.7 -3,-0.2 -5,-0.1 -2,-0.1 0.995 133.8 -17.0 -76.4 -64.0 -1.5 6.1 -2.4 13 23 A P T 5S- 0 0 83 0, 0.0 -3,-0.2 0, 0.0 -4,-0.1 0.278 89.8-101.8-129.3 15.0 -4.2 6.9 0.5 14 24 A K < 0 0 147 -5,-2.2 -4,-0.2 1,-0.2 -5,-0.1 0.958 360.0 360.0 60.9 59.4 -2.3 6.3 3.9 15 25 A G 0 0 61 -6,-0.3 -1,-0.2 -9,-0.1 -5,-0.1 -0.495 360.0 360.0-165.0 360.0 -3.7 2.8 4.8