==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=6-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HORMONE/GROWTH FACTOR 17-DEC-01 1KMX . COMPND 2 MOLECULE: VASCULAR ENDOTHELIAL GROWTH FACTOR; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR M.E.STAUFFER,N.J.SKELTON,W.J.FAIRBROTHER . 54 1 4 4 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5155.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 19 35.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 8 14.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 3.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 7.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 5 9.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 3.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 148 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -51.1 -69.5 -25.1 41.6 2 2 A R - 0 0 204 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.708 360.0 -39.0 -94.2 -25.5 -67.4 -23.0 39.2 3 3 A Q - 0 0 88 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.108 57.7-160.0-160.2 -72.0 -69.6 -23.4 36.1 4 4 A E + 0 0 149 1,-0.1 0, 0.0 0, 0.0 0, 0.0 0.991 34.5 143.2 68.1 79.4 -71.3 -26.8 35.4 5 5 A N - 0 0 60 2,-0.0 -1,-0.1 20,-0.0 2,-0.1 -0.621 35.9-152.9-149.4 83.0 -72.2 -26.7 31.7 6 6 A P - 0 0 116 0, 0.0 2,-0.4 0, 0.0 0, 0.0 -0.347 11.7-155.3 -61.5 133.2 -71.7 -30.0 29.8 7 7 A a - 0 0 39 -2,-0.1 18,-0.1 13,-0.0 3,-0.1 -0.909 15.3-119.9-113.3 138.0 -71.1 -29.5 26.1 8 8 A G - 0 0 51 -2,-0.4 0, 0.0 1,-0.1 0, 0.0 -0.506 41.6 -91.0 -75.7 141.4 -71.9 -32.1 23.4 9 9 A P - 0 0 113 0, 0.0 -1,-0.1 0, 0.0 3,-0.0 -0.126 34.6-163.2 -49.6 143.5 -68.9 -33.5 21.3 10 10 A b + 0 0 58 -3,-0.1 17,-0.0 16,-0.1 5,-0.0 0.909 66.4 12.1 -91.7 -72.0 -68.2 -31.6 18.1 11 11 A S - 0 0 40 1,-0.1 4,-0.1 4,-0.1 36,-0.1 0.041 68.2-134.1 -90.5-159.2 -66.1 -33.8 15.9 12 12 A E S S- 0 0 180 -3,-0.0 3,-0.2 -2,-0.0 -1,-0.1 0.620 80.4 -6.2-125.0 -70.8 -65.3 -37.5 16.2 13 13 A R S S+ 0 0 190 1,-0.2 2,-1.0 2,-0.1 3,-0.4 0.850 133.3 44.5-100.2 -50.5 -61.6 -38.6 15.7 14 14 A R S S+ 0 0 86 1,-0.2 3,-0.3 2,-0.1 -1,-0.2 -0.425 73.4 125.7 -95.0 58.7 -59.8 -35.5 14.6 15 15 A K > + 0 0 110 -2,-1.0 3,-1.9 -3,-0.2 -1,-0.2 0.616 49.6 82.1 -89.4 -16.5 -61.4 -33.2 17.2 16 16 A H T 3 S+ 0 0 151 -3,-0.4 -1,-0.2 1,-0.3 -2,-0.1 0.772 82.8 65.5 -59.9 -26.2 -58.1 -31.9 18.6 17 17 A L T 3 S+ 0 0 48 -3,-0.3 13,-1.7 30,-0.1 -1,-0.3 0.629 92.6 79.5 -72.2 -13.7 -58.0 -29.4 15.8 18 18 A F E < -A 29 0A 31 -3,-1.9 2,-0.4 11,-0.2 11,-0.2 -0.512 69.1-142.0 -93.8 166.2 -61.2 -27.6 17.1 19 19 A V E -A 28 0A 66 9,-1.6 9,-1.6 -2,-0.2 2,-0.4 -0.994 13.7-154.9-128.5 127.9 -61.6 -25.1 19.9 20 20 A Q E -A 27 0A 91 -2,-0.4 7,-0.2 7,-0.2 -13,-0.0 -0.871 6.9-141.1-109.6 139.0 -64.7 -25.1 22.2 21 21 A D > - 0 0 83 5,-1.4 4,-1.4 -2,-0.4 5,-0.0 -0.721 9.2-141.5 -94.4 142.6 -66.1 -22.2 24.1 22 22 A P T 4 S+ 0 0 61 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.489 99.1 48.3 -81.2 -2.3 -67.5 -22.7 27.7 23 23 A Q T 4 S+ 0 0 151 3,-0.1 -3,-0.0 0, 0.0 -2,-0.0 0.809 127.3 18.7-102.7 -43.0 -70.4 -20.3 27.1 24 24 A T T 4 S- 0 0 78 2,-0.1 3,-0.1 -17,-0.0 -4,-0.0 0.606 86.4-140.4-102.2 -18.5 -71.9 -21.5 23.8 25 25 A a < + 0 0 33 -4,-1.4 2,-0.1 1,-0.2 -17,-0.1 0.672 57.4 135.4 63.9 17.9 -70.3 -25.0 23.7 26 26 A K - 0 0 138 -19,-0.1 -5,-1.4 -5,-0.0 2,-0.3 -0.366 47.6-129.5 -90.1 173.6 -69.7 -24.5 20.0 27 27 A b E -A 20 0A 38 -7,-0.2 2,-0.3 -2,-0.1 -7,-0.2 -0.955 17.9-174.2-129.5 148.6 -66.6 -25.4 18.0 28 28 A S E -A 19 0A 75 -9,-1.6 -9,-1.6 -2,-0.3 17,-0.0 -1.000 32.8-105.8-140.3 136.1 -64.3 -23.5 15.6 29 29 A c E -A 18 0A 32 -2,-0.3 -11,-0.2 -11,-0.2 19,-0.1 -0.213 19.2-139.1 -59.5 150.8 -61.4 -24.8 13.6 30 30 A K S S+ 0 0 111 -13,-1.7 -1,-0.1 18,-0.1 -12,-0.1 0.971 83.4 67.3 -74.1 -57.9 -57.9 -23.8 14.7 31 31 A N S S- 0 0 26 17,-0.3 2,-0.3 -14,-0.2 -2,-0.0 -0.261 77.6-141.1 -63.9 151.2 -56.4 -23.2 11.2 32 32 A T > - 0 0 66 1,-0.1 4,-1.6 16,-0.0 3,-0.4 -0.741 22.8-112.0-114.1 163.0 -57.8 -20.3 9.2 33 33 A D H > S+ 0 0 109 -2,-0.3 4,-3.0 1,-0.2 8,-0.2 0.837 116.1 61.6 -60.1 -33.3 -58.5 -19.8 5.5 34 34 A S H > S+ 0 0 67 2,-0.2 4,-1.1 1,-0.2 -1,-0.2 0.911 102.2 50.0 -60.0 -45.0 -55.7 -17.3 5.3 35 35 A R H >4 S+ 0 0 183 -3,-0.4 3,-0.6 2,-0.2 4,-0.4 0.939 113.9 44.2 -60.0 -49.3 -53.1 -20.0 6.3 36 36 A d H ><>S+ 0 0 1 -4,-1.6 3,-1.9 1,-0.2 5,-0.7 0.930 110.6 54.5 -61.8 -45.9 -54.4 -22.5 3.7 37 37 A K H ><5S+ 0 0 130 -4,-3.0 3,-1.9 1,-0.3 -1,-0.2 0.724 89.0 80.1 -61.1 -20.7 -54.6 -19.7 1.0 38 38 A A T <<5S+ 0 0 73 -4,-1.1 -1,-0.3 -3,-0.6 -2,-0.2 0.772 107.3 28.2 -58.6 -24.4 -50.9 -19.0 1.8 39 39 A R T < 5S- 0 0 198 -3,-1.9 -1,-0.3 -4,-0.4 -2,-0.2 -0.155 130.1 -86.9-128.6 37.9 -50.1 -22.0 -0.4 40 40 A Q T < 5S+ 0 0 157 -3,-1.9 2,-0.3 1,-0.2 -3,-0.2 0.964 88.9 125.7 56.8 58.4 -53.1 -21.9 -2.7 41 41 A L < - 0 0 49 -5,-0.7 2,-0.4 -8,-0.2 11,-0.2 -0.890 53.4-133.4-139.0 168.7 -55.4 -24.0 -0.5 42 42 A E E -B 51 0B 122 9,-2.5 9,-0.7 -2,-0.3 7,-0.1 -0.957 22.7-125.9-132.8 115.3 -58.9 -23.7 1.0 43 43 A L E -B 50 0B 24 -2,-0.4 2,-0.5 7,-0.2 7,-0.2 -0.347 24.2-142.6 -58.7 127.7 -59.6 -24.6 4.7 44 44 A N E >> -B 49 0B 54 5,-3.0 4,-1.9 1,-0.1 5,-0.7 -0.814 6.1-150.0 -97.5 130.3 -62.4 -27.2 4.9 45 45 A E T 45S+ 0 0 144 -2,-0.5 -1,-0.1 1,-0.2 -2,-0.1 0.486 89.9 69.5 -76.1 -2.7 -64.8 -26.8 7.8 46 46 A R T 45S+ 0 0 193 3,-0.1 -1,-0.2 1,-0.1 -3,-0.0 0.938 125.7 0.3 -79.9 -49.9 -65.5 -30.6 7.9 47 47 A T T 45S- 0 0 40 -3,-0.2 -2,-0.2 2,-0.1 -30,-0.1 0.415 97.3-116.1-117.5 -3.1 -62.0 -31.7 9.2 48 48 A c T <5S+ 0 0 0 -4,-1.9 2,-0.3 1,-0.2 -17,-0.3 0.973 71.7 124.6 64.9 55.5 -60.3 -28.2 9.5 49 49 A R E < -B 44 0B 81 -5,-0.7 -5,-3.0 -7,-0.1 2,-0.3 -0.910 63.7 -97.9-139.9 166.5 -57.6 -28.9 6.9 50 50 A d E +B 43 0B 37 -2,-0.3 2,-0.3 -7,-0.2 -7,-0.2 -0.678 40.6 178.6 -90.0 141.0 -56.3 -27.3 3.7 51 51 A D E -B 42 0B 70 -9,-0.7 -9,-2.5 -2,-0.3 0, 0.0 -0.939 30.7-116.5-138.7 160.6 -57.4 -28.6 0.3 52 52 A K - 0 0 162 -2,-0.3 -11,-0.1 -11,-0.2 -12,-0.0 -0.871 20.9-174.0-101.4 111.6 -56.8 -27.8 -3.4 53 53 A P 0 0 68 0, 0.0 -1,-0.2 0, 0.0 -12,-0.1 0.939 360.0 360.0 -68.5 -47.0 -60.0 -26.6 -5.2 54 54 A R 0 0 282 0, 0.0 -2,-0.1 0, 0.0 0, 0.0 0.090 360.0 360.0-163.6 360.0 -58.4 -26.5 -8.7