==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-JAN-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN, PROTEIN BINDING 21-JUL-09 2KM6 . COMPND 2 MOLECULE: NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 7; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR A.PINHEIRO,M.PROELL,R.SCHWARZENBACHER,W.PETI . 96 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5881.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 71 74.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 9.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 14 14.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 45 46.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 1 0 0 1 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 3 A M 0 0 124 0, 0.0 2,-0.2 0, 0.0 90,-0.0 0.000 360.0 360.0 360.0 139.4 15.8 3.3 -4.8 2 4 A T - 0 0 58 1,-0.1 0, 0.0 2,-0.0 0, 0.0 -0.629 360.0-140.6-121.3 178.7 14.2 3.0 -8.2 3 5 A S S > S+ 0 0 102 -2,-0.2 4,-1.4 3,-0.1 5,-0.2 0.743 98.7 33.3-107.2 -53.3 11.2 4.6 -9.9 4 6 A P H > S+ 0 0 91 0, 0.0 4,-2.3 0, 0.0 5,-0.2 0.970 123.3 45.7 -67.6 -50.0 9.5 1.7 -11.9 5 7 A Q H > S+ 0 0 94 1,-0.2 4,-2.4 2,-0.2 5,-0.2 0.775 104.6 67.5 -62.8 -26.7 10.3 -1.0 -9.3 6 8 A L H > S+ 0 0 23 2,-0.2 4,-1.1 1,-0.2 3,-0.2 0.980 111.4 28.9 -56.9 -60.7 9.2 1.5 -6.6 7 9 A E H X S+ 0 0 78 -4,-1.4 4,-2.1 1,-0.2 -2,-0.2 0.820 117.4 62.3 -73.9 -29.8 5.5 1.5 -7.6 8 10 A W H X S+ 0 0 103 -4,-2.3 4,-2.8 -5,-0.2 -1,-0.2 0.869 97.2 56.5 -62.3 -38.8 5.8 -2.1 -9.0 9 11 A T H X S+ 0 0 6 -4,-2.4 4,-1.9 -3,-0.2 -1,-0.2 0.931 106.7 50.7 -62.3 -40.7 6.7 -3.4 -5.5 10 12 A L H X S+ 0 0 1 -4,-1.1 4,-2.4 2,-0.2 3,-0.3 0.957 112.8 44.0 -58.7 -53.6 3.5 -2.0 -4.2 11 13 A Q H X S+ 0 0 47 -4,-2.1 4,-0.9 1,-0.2 5,-0.2 0.902 109.2 58.7 -61.9 -38.6 1.3 -3.6 -6.9 12 14 A T H X S+ 0 0 24 -4,-2.8 4,-0.5 2,-0.2 3,-0.3 0.869 109.6 42.5 -60.4 -38.6 3.2 -6.9 -6.5 13 15 A L H >X S+ 0 0 0 -4,-1.9 4,-2.1 -3,-0.3 3,-1.1 0.951 116.6 48.0 -70.5 -45.8 2.2 -7.1 -2.9 14 16 A L H 3< S+ 0 0 1 -4,-2.4 37,-0.2 1,-0.3 -2,-0.2 0.465 106.7 57.0 -77.7 -4.4 -1.3 -6.0 -3.6 15 17 A E H 3< S+ 0 0 110 -4,-0.9 -1,-0.3 -3,-0.3 -2,-0.2 0.568 109.0 47.0 -96.9 -13.5 -1.5 -8.5 -6.5 16 18 A Q H << S+ 0 0 105 -3,-1.1 2,-0.5 -4,-0.5 -2,-0.2 0.804 120.6 39.2 -89.4 -37.9 -0.7 -11.2 -4.1 17 19 A L S < S+ 0 0 5 -4,-2.1 -1,-0.3 1,-0.1 34,-0.2 -0.958 85.4 89.8-112.4 123.1 -3.2 -10.0 -1.5 18 20 A N >> + 0 0 47 -2,-0.5 4,-2.7 -3,-0.1 5,-0.5 0.091 48.1 92.2-169.2 -55.2 -6.5 -8.7 -3.0 19 21 A E T 45S- 0 0 156 1,-0.3 4,-0.1 2,-0.2 -2,-0.1 0.719 125.6 -22.9 -29.5 -74.8 -9.5 -11.1 -3.4 20 22 A D T >5S+ 0 0 92 2,-0.1 4,-0.6 3,-0.1 -1,-0.3 0.321 135.9 78.9-118.3 7.3 -11.2 -10.6 -0.1 21 23 A E H >5S+ 0 0 71 1,-0.2 4,-2.2 2,-0.2 3,-0.4 0.839 83.7 55.7 -85.3 -38.1 -8.0 -9.4 1.3 22 24 A L H X5S+ 0 0 4 -4,-2.7 4,-3.0 1,-0.2 5,-0.2 0.816 98.2 64.3 -71.1 -29.6 -7.9 -5.9 0.0 23 25 A K H >X S+ 0 0 51 -4,-0.6 4,-2.2 -3,-0.4 3,-0.6 0.946 111.7 55.9 -68.7 -52.9 -9.7 -5.7 4.9 25 27 A F H 3X S+ 0 0 1 -4,-2.2 4,-2.2 1,-0.3 -2,-0.2 0.869 106.4 50.6 -48.8 -47.8 -6.6 -3.8 3.9 26 28 A K H 3X S+ 0 0 21 -4,-3.0 4,-1.2 1,-0.2 -1,-0.3 0.861 110.9 49.2 -62.6 -35.7 -8.7 -0.7 3.0 27 29 A S H << S+ 0 0 74 -4,-0.9 -1,-0.2 -3,-0.6 -2,-0.2 0.860 110.6 49.0 -75.2 -35.8 -10.5 -0.8 6.3 28 30 A L H >X S+ 0 0 51 -4,-2.2 3,-0.9 1,-0.2 4,-0.6 0.844 109.2 54.3 -70.5 -35.2 -7.2 -1.1 8.2 29 31 A L H 3< S+ 0 0 5 -4,-2.2 3,-0.4 -5,-0.3 -2,-0.2 0.819 107.5 49.9 -65.6 -31.9 -5.9 1.8 6.2 30 32 A W T 3< S+ 0 0 104 -4,-1.2 -1,-0.3 1,-0.2 -2,-0.2 0.425 105.0 61.2 -88.8 2.5 -9.0 3.7 7.3 31 33 A A T <4 S+ 0 0 81 -3,-0.9 -1,-0.2 -5,-0.1 -2,-0.2 0.570 91.0 74.2-103.2 -16.5 -8.3 2.8 10.9 32 34 A F S < S- 0 0 50 -4,-0.6 2,-0.5 -3,-0.4 0, 0.0 -0.668 103.5 -83.8 -95.1 156.7 -4.9 4.4 11.3 33 35 A P - 0 0 108 0, 0.0 2,-0.6 0, 0.0 -2,-0.1 -0.464 44.4-140.8 -63.6 110.3 -4.5 8.2 11.6 34 36 A L - 0 0 35 -2,-0.5 2,-0.5 -4,-0.1 5,-0.1 -0.657 17.5-136.4 -77.7 117.9 -4.5 9.5 8.1 35 37 A E > - 0 0 108 -2,-0.6 3,-2.9 3,-0.1 2,-0.7 -0.672 43.6 -65.8 -90.3 121.6 -2.0 12.2 7.8 36 38 A D T 3 S+ 0 0 155 -2,-0.5 3,-0.5 1,-0.3 4,-0.3 -0.119 134.3 27.2 46.7 -83.7 -2.8 15.5 6.0 37 39 A V T > S+ 0 0 46 -2,-0.7 3,-1.3 1,-0.2 -1,-0.3 0.829 117.2 62.0 -77.4 -26.7 -3.2 14.3 2.4 38 40 A L G X S+ 0 0 4 -3,-2.9 3,-1.2 1,-0.3 -1,-0.2 0.752 90.8 69.5 -68.9 -19.8 -4.3 10.8 3.5 39 41 A Q G 3 S+ 0 0 140 -3,-0.5 -1,-0.3 1,-0.3 -2,-0.2 0.779 104.7 40.2 -69.7 -25.1 -7.2 12.5 5.1 40 42 A K G < S+ 0 0 154 -3,-1.3 -1,-0.3 -4,-0.3 -2,-0.2 0.229 81.8 151.5-108.3 13.4 -8.6 13.3 1.7 41 43 A T < - 0 0 10 -3,-1.2 2,-1.2 1,-0.2 3,-0.1 -0.218 57.3-110.9 -49.2 121.5 -7.7 9.9 0.1 42 44 A P >> + 0 0 45 0, 0.0 4,-2.3 0, 0.0 3,-0.9 -0.456 38.8 177.7 -63.8 94.8 -10.2 9.2 -2.7 43 45 A W H 3> S+ 0 0 91 -2,-1.2 4,-3.1 1,-0.3 6,-0.2 0.814 78.3 70.7 -67.8 -28.4 -12.1 6.3 -1.2 44 46 A S H 3> S+ 0 0 88 2,-0.2 4,-0.7 1,-0.2 -1,-0.3 0.830 107.0 37.0 -57.3 -33.0 -14.2 6.5 -4.4 45 47 A E H <> S+ 0 0 69 -3,-0.9 4,-2.3 2,-0.2 3,-0.3 0.940 114.1 54.2 -80.1 -49.4 -11.2 5.2 -6.2 46 48 A V H < S+ 0 0 0 -4,-2.3 -2,-0.2 1,-0.2 -3,-0.2 0.774 100.7 65.6 -56.3 -31.3 -10.1 2.8 -3.4 47 49 A E H < S+ 0 0 118 -4,-3.1 -1,-0.2 1,-0.2 -2,-0.2 0.976 116.4 22.2 -52.1 -64.2 -13.6 1.2 -3.5 48 50 A E H < S+ 0 0 168 -4,-0.7 -1,-0.2 -3,-0.3 -2,-0.2 0.673 104.6 107.6 -83.1 -17.8 -13.4 -0.2 -7.0 49 51 A A < - 0 0 3 -4,-2.3 2,-0.4 -6,-0.2 -4,-0.0 -0.390 47.7-176.6 -65.3 132.7 -9.6 -0.2 -6.9 50 52 A D > - 0 0 103 -2,-0.1 3,-2.3 -27,-0.0 4,-0.2 -0.971 49.5 -41.8-132.8 144.0 -8.0 -3.5 -6.6 51 53 A G T 3> S+ 0 0 2 -2,-0.4 4,-2.3 1,-0.3 3,-0.3 -0.097 135.0 26.0 48.0-101.0 -4.4 -4.5 -6.3 52 54 A K H 3> S+ 0 0 75 1,-0.2 4,-2.0 2,-0.2 -1,-0.3 0.891 124.3 53.1 -58.1 -45.1 -2.5 -2.3 -8.7 53 55 A K H <> S+ 0 0 71 -3,-2.3 4,-1.2 1,-0.2 -1,-0.2 0.866 108.5 48.6 -62.7 -36.7 -5.1 0.4 -8.6 54 56 A L H >> S+ 0 0 0 -3,-0.3 4,-1.4 2,-0.2 3,-0.5 0.922 109.0 52.9 -70.9 -40.0 -4.9 0.5 -4.8 55 57 A A H 3X S+ 0 0 1 -4,-2.3 4,-2.0 1,-0.3 -2,-0.2 0.864 105.5 57.1 -58.2 -36.6 -1.1 0.7 -4.9 56 58 A E H 3< S+ 0 0 51 -4,-2.0 4,-0.4 1,-0.2 -1,-0.3 0.848 103.1 52.6 -63.1 -37.0 -1.6 3.6 -7.3 57 59 A I H X S+ 0 0 11 -4,-1.4 4,-1.2 1,-0.2 3,-0.6 0.936 113.1 41.6 -68.6 -44.2 -0.9 5.0 -2.1 59 61 A V H 3< S+ 0 0 47 -4,-2.0 -1,-0.2 1,-0.2 -2,-0.2 0.507 105.7 69.7 -81.9 -2.5 1.7 6.5 -4.4 60 62 A N H 34 S+ 0 0 87 -4,-0.4 -1,-0.2 -5,-0.2 -2,-0.2 0.834 112.4 24.0 -79.1 -34.9 -0.9 9.1 -5.3 61 63 A T H << S+ 0 0 27 -4,-0.9 -2,-0.2 -3,-0.6 -3,-0.1 0.927 115.7 36.8 -98.0 -68.8 -0.8 10.7 -1.9 62 64 A S S < S- 0 0 19 -4,-1.2 2,-0.2 1,-0.1 -1,-0.0 -0.195 78.0 -95.8 -93.6 174.0 2.4 10.2 0.1 63 65 A S >> - 0 0 90 1,-0.1 4,-2.3 -2,-0.0 3,-1.4 -0.560 41.7-107.7 -83.0 153.5 6.1 10.0 -0.5 64 66 A E H 3> S+ 0 0 44 1,-0.3 4,-3.5 2,-0.2 5,-0.2 0.829 116.5 61.7 -53.0 -36.9 7.8 6.6 -0.9 65 67 A N H 34 S+ 0 0 95 1,-0.2 4,-0.3 2,-0.2 -1,-0.3 0.836 110.7 39.1 -62.2 -33.1 9.4 6.8 2.6 66 68 A W H X> S+ 0 0 63 -3,-1.4 4,-2.8 2,-0.2 3,-1.1 0.935 118.0 47.9 -82.0 -45.4 6.0 7.0 4.2 67 69 A I H 3X S+ 0 0 1 -4,-2.3 4,-3.0 1,-0.3 5,-0.4 0.872 103.3 61.7 -63.6 -39.5 4.4 4.5 1.9 68 70 A R H 3< S+ 0 0 33 -4,-3.5 -1,-0.3 1,-0.2 24,-0.2 0.707 115.9 33.6 -63.6 -21.0 7.2 1.9 2.3 69 71 A N H <> S+ 0 0 97 -3,-1.1 4,-2.3 -4,-0.3 -1,-0.2 0.777 116.1 58.4 -97.4 -38.0 6.4 1.8 6.0 70 72 A A H X S+ 0 0 11 -4,-2.8 4,-1.6 2,-0.2 -2,-0.2 0.923 105.4 45.7 -57.7 -54.8 2.6 2.3 5.5 71 73 A T H X S+ 0 0 1 -4,-3.0 4,-1.9 1,-0.2 -1,-0.2 0.875 112.5 53.3 -63.0 -34.7 1.9 -0.7 3.3 72 74 A V H > S+ 0 0 9 -5,-0.4 4,-2.8 1,-0.2 -1,-0.2 0.938 104.1 54.4 -64.4 -45.9 4.0 -2.8 5.6 73 75 A N H X S+ 0 0 85 -4,-2.3 4,-2.1 1,-0.2 -1,-0.2 0.844 107.5 51.1 -60.3 -35.6 2.1 -1.8 8.7 74 76 A I H X S+ 0 0 6 -4,-1.6 4,-1.0 2,-0.2 -1,-0.2 0.928 111.0 47.4 -67.9 -43.7 -1.2 -2.8 7.1 75 77 A L H <>S+ 0 0 0 -4,-1.9 5,-2.7 2,-0.2 3,-0.5 0.897 110.7 52.9 -62.3 -39.2 0.3 -6.2 6.2 76 78 A E H ><5S+ 0 0 72 -4,-2.8 3,-1.4 1,-0.2 -2,-0.2 0.901 107.2 51.9 -60.3 -41.6 1.5 -6.4 9.8 77 79 A E H 3<5S+ 0 0 129 -4,-2.1 -1,-0.2 1,-0.3 -2,-0.2 0.699 107.8 51.8 -68.2 -20.8 -2.1 -5.7 10.9 78 80 A M T 3<5S- 0 0 40 -4,-1.0 -1,-0.3 -3,-0.5 -2,-0.2 0.369 115.2-118.4 -95.1 1.8 -3.2 -8.5 8.7 79 81 A N T < 5 + 0 0 138 -3,-1.4 2,-0.7 1,-0.3 -3,-0.2 0.698 63.6 152.2 66.0 23.1 -0.7 -10.9 10.4 80 82 A L < + 0 0 35 -5,-2.7 -1,-0.3 1,-0.2 -2,-0.1 -0.742 8.1 154.5 -86.7 113.5 0.9 -11.3 6.9 81 83 A T > + 0 0 70 -2,-0.7 4,-2.9 -3,-0.1 5,-0.3 0.823 61.1 58.5-102.3 -53.2 4.5 -12.0 7.4 82 84 A E T 4 S+ 0 0 127 1,-0.3 4,-0.4 2,-0.2 3,-0.4 0.886 117.2 27.6 -45.9 -70.1 5.5 -13.8 4.3 83 85 A L T > S+ 0 0 22 1,-0.2 4,-1.2 2,-0.2 -1,-0.3 0.720 118.9 60.7 -72.4 -17.1 4.7 -11.3 1.5 84 86 A C H > S+ 0 0 0 1,-0.2 4,-2.4 2,-0.2 -1,-0.2 0.876 98.7 55.4 -76.9 -33.9 5.2 -8.5 4.0 85 87 A K H < S+ 0 0 128 -4,-2.9 -1,-0.2 -3,-0.4 -2,-0.2 0.629 101.9 59.3 -72.1 -12.3 8.8 -9.5 4.4 86 88 A M H >> S+ 0 0 55 -4,-0.4 4,-2.3 -5,-0.3 3,-0.7 0.876 107.5 44.6 -77.4 -40.0 9.0 -9.2 0.7 87 89 A A H 3<>S+ 0 0 0 -4,-1.2 5,-2.3 1,-0.3 4,-0.3 0.881 108.6 57.4 -69.6 -38.6 8.0 -5.6 1.1 88 90 A K T 3<5S+ 0 0 80 -4,-2.4 -1,-0.3 1,-0.2 6,-0.2 0.607 114.5 39.6 -67.2 -14.7 10.5 -5.3 4.0 89 91 A A T <45S+ 0 0 76 -3,-0.7 -2,-0.2 -5,-0.2 -1,-0.2 0.744 131.9 21.1-101.8 -33.6 13.1 -6.3 1.6 90 92 A E T <5S+ 0 0 69 -4,-2.3 3,-0.3 3,-0.1 -3,-0.2 0.911 125.9 36.2-100.0 -67.0 12.0 -4.4 -1.5 91 93 A M T 5S+ 0 0 4 -4,-0.3 2,-1.6 1,-0.3 -3,-0.2 0.948 118.6 47.6 -59.6 -56.1 9.8 -1.5 -0.7 92 94 A M S