==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=28-JUN-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSFERASE/DNA 08-MAY-13 4KMF . COMPND 2 MOLECULE: INTERFERON-INDUCIBLE AND DOUBLE-STRANDED-DEPENDEN . SOURCE 2 ORGANISM_SCIENTIFIC: CARASSIUS AURATUS; . AUTHOR D.KIM,K.K.KIM . 62 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4114.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 42 67.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 7 11.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 31 50.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 3.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 2 A S > 0 0 112 0, 0.0 4,-2.2 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0 166.8 7.6 11.7 -5.9 2 3 A A H > + 0 0 78 2,-0.2 4,-2.6 1,-0.2 5,-0.1 0.841 360.0 55.9 -64.1 -32.6 8.6 12.7 -2.4 3 4 A E H > S+ 0 0 86 2,-0.2 4,-2.6 1,-0.2 -1,-0.2 0.930 107.4 49.2 -64.4 -44.7 7.6 9.2 -1.2 4 5 A T H > S+ 0 0 68 2,-0.2 4,-2.2 1,-0.2 -2,-0.2 0.919 111.3 49.7 -56.7 -44.3 10.0 7.7 -3.7 5 6 A Q H X S+ 0 0 84 -4,-2.2 4,-2.0 1,-0.2 -2,-0.2 0.920 110.2 49.7 -64.9 -43.1 12.7 10.1 -2.5 6 7 A M H X S+ 0 0 39 -4,-2.6 4,-1.9 2,-0.2 -1,-0.2 0.895 109.9 52.0 -57.1 -44.1 12.1 9.2 1.2 7 8 A E H X S+ 0 0 27 -4,-2.6 4,-2.6 2,-0.2 -2,-0.2 0.901 106.7 53.5 -60.6 -39.9 12.3 5.5 0.2 8 9 A R H X S+ 0 0 153 -4,-2.2 4,-2.6 1,-0.2 -2,-0.2 0.898 107.2 51.5 -60.4 -41.8 15.7 6.1 -1.5 9 10 A K H X S+ 0 0 97 -4,-2.0 4,-2.2 2,-0.2 -1,-0.2 0.878 109.2 49.8 -63.3 -40.0 16.9 7.7 1.7 10 11 A I H X S+ 0 0 0 -4,-1.9 4,-2.2 2,-0.2 -2,-0.2 0.916 111.3 49.2 -64.3 -45.6 15.9 4.7 3.8 11 12 A I H X S+ 0 0 31 -4,-2.6 4,-2.6 2,-0.2 -2,-0.2 0.926 110.8 50.1 -58.9 -44.1 17.6 2.4 1.3 12 13 A D H X S+ 0 0 104 -4,-2.6 4,-2.5 1,-0.2 -2,-0.2 0.901 108.5 53.8 -61.4 -42.1 20.8 4.5 1.5 13 14 A F H X S+ 0 0 19 -4,-2.2 4,-2.5 2,-0.2 5,-0.3 0.913 110.6 45.0 -57.0 -47.8 20.6 4.3 5.3 14 15 A L H X S+ 0 0 2 -4,-2.2 4,-2.2 2,-0.2 -2,-0.2 0.876 112.2 51.9 -67.0 -37.0 20.5 0.5 5.2 15 16 A R H < S+ 0 0 71 -4,-2.6 -2,-0.2 1,-0.2 -1,-0.2 0.903 117.2 40.0 -61.4 -40.4 23.3 0.4 2.6 16 17 A Q H < S+ 0 0 80 -4,-2.5 -2,-0.2 -5,-0.2 -1,-0.2 0.821 129.7 26.1 -79.5 -30.5 25.4 2.6 4.9 17 18 A N H < S- 0 0 101 -4,-2.5 -3,-0.2 1,-0.2 -2,-0.2 0.586 95.1-134.0-115.8 -12.5 24.5 1.1 8.2 18 19 A G < - 0 0 29 -4,-2.2 -1,-0.2 -5,-0.3 41,-0.1 -0.278 62.7 -0.9 81.3-172.4 23.5 -2.5 7.8 19 20 A K S S+ 0 0 149 39,-0.1 2,-0.3 -4,-0.1 41,-0.2 -0.166 75.0 173.4 -61.7 136.9 20.5 -4.2 9.2 20 21 A S E -A 59 0A 12 39,-2.3 39,-3.0 4,-0.0 2,-0.2 -0.979 32.5-118.4-146.0 148.5 18.4 -1.9 11.5 21 22 A I E > -A 58 0A 50 -2,-0.3 4,-1.6 37,-0.2 3,-0.4 -0.553 39.7-107.5 -83.6 160.1 15.2 -1.8 13.4 22 23 A A H > S+ 0 0 10 35,-0.6 4,-3.0 1,-0.2 5,-0.2 0.845 116.1 60.5 -55.4 -37.8 12.6 0.8 12.5 23 24 A L H > S+ 0 0 114 1,-0.2 4,-1.9 2,-0.2 -1,-0.2 0.923 106.8 46.2 -63.5 -41.1 13.2 3.0 15.5 24 25 A T H > S+ 0 0 67 -3,-0.4 4,-1.7 2,-0.2 -1,-0.2 0.914 112.9 48.0 -63.7 -45.7 16.9 3.5 14.5 25 26 A I H X S+ 0 0 0 -4,-1.6 4,-2.8 1,-0.2 5,-0.4 0.924 110.5 54.0 -61.9 -45.9 16.0 4.3 10.9 26 27 A A H X>S+ 0 0 9 -4,-3.0 4,-1.8 1,-0.2 5,-1.2 0.909 105.5 52.0 -56.4 -43.7 13.4 6.7 12.1 27 28 A K H <5S+ 0 0 84 -4,-1.9 -1,-0.2 3,-0.2 -2,-0.2 0.890 115.6 41.2 -62.3 -40.1 15.8 8.7 14.3 28 29 A E H <5S+ 0 0 135 -4,-1.7 -2,-0.2 1,-0.2 -1,-0.2 0.895 118.4 42.1 -77.1 -42.1 18.3 9.1 11.4 29 30 A I H <5S- 0 0 38 -4,-2.8 -2,-0.2 -5,-0.2 -1,-0.2 0.767 107.9-131.1 -73.7 -22.4 15.9 9.9 8.6 30 31 A G T <5 + 0 0 63 -4,-1.8 2,-0.3 -5,-0.4 -3,-0.2 0.801 62.4 127.0 77.4 32.4 14.1 12.1 11.1 31 32 A L < - 0 0 45 -5,-1.2 -1,-0.3 -6,-0.2 -2,-0.1 -0.846 67.6 -94.3-113.7 154.0 10.6 10.7 10.4 32 33 A D > - 0 0 92 -2,-0.3 4,-2.2 1,-0.1 3,-0.5 -0.327 39.2-109.5 -63.9 153.2 8.1 9.3 12.9 33 34 A K H > S+ 0 0 118 1,-0.2 4,-2.8 2,-0.2 5,-0.2 0.842 116.1 54.2 -51.8 -39.8 8.2 5.5 13.3 34 35 A S H > S+ 0 0 86 2,-0.2 4,-2.3 1,-0.2 -1,-0.2 0.881 109.1 48.2 -68.3 -39.0 4.8 5.0 11.6 35 36 A T H > S+ 0 0 27 -3,-0.5 4,-2.1 2,-0.2 -1,-0.2 0.924 111.9 48.8 -65.2 -46.6 5.9 6.8 8.5 36 37 A V H X S+ 0 0 0 -4,-2.2 4,-2.8 2,-0.2 -2,-0.2 0.922 111.9 50.1 -56.6 -44.6 9.2 4.9 8.4 37 38 A N H X S+ 0 0 34 -4,-2.8 4,-2.6 2,-0.2 5,-0.3 0.898 105.2 56.2 -65.4 -38.7 7.2 1.6 8.8 38 39 A R H X S+ 0 0 105 -4,-2.3 4,-2.0 1,-0.2 -1,-0.2 0.962 113.4 42.1 -52.3 -50.4 4.8 2.7 5.9 39 40 A H H X S+ 0 0 2 -4,-2.1 4,-2.8 2,-0.2 -2,-0.2 0.891 111.5 53.7 -65.4 -42.3 7.9 3.0 3.7 40 41 A L H X S+ 0 0 0 -4,-2.8 4,-1.5 2,-0.2 -1,-0.2 0.917 111.0 46.2 -61.0 -43.7 9.6 -0.2 5.0 41 42 A Y H X S+ 0 0 102 -4,-2.6 4,-2.2 2,-0.2 -1,-0.2 0.877 112.6 49.8 -70.8 -33.6 6.5 -2.3 4.2 42 43 A N H X S+ 0 0 66 -4,-2.0 4,-1.9 -5,-0.3 -2,-0.2 0.933 110.1 52.1 -62.9 -44.4 6.1 -0.7 0.7 43 44 A L H <>S+ 0 0 0 -4,-2.8 5,-3.0 1,-0.2 6,-1.2 0.796 108.6 51.3 -61.8 -29.6 9.9 -1.4 0.2 44 45 A Q H ><5S+ 0 0 69 -4,-1.5 3,-1.5 4,-0.2 -1,-0.2 0.915 107.6 50.9 -72.5 -41.7 9.1 -5.0 1.1 45 46 A R H 3<5S+ 0 0 225 -4,-2.2 -2,-0.2 1,-0.3 -1,-0.2 0.851 110.9 50.4 -58.4 -31.7 6.3 -5.2 -1.4 46 47 A S T 3<5S- 0 0 59 -4,-1.9 -1,-0.3 -5,-0.1 -2,-0.2 0.275 116.0-116.9 -97.1 10.6 8.6 -3.9 -4.0 47 48 A N T < 5S+ 0 0 109 -3,-1.5 -3,-0.2 2,-0.2 -2,-0.1 0.769 84.0 114.1 65.2 33.3 11.3 -6.5 -3.1 48 49 A Q S