==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER BLOOD CLOTTING 21-AUG-09 2KNF . COMPND 2 MOLECULE: PLASMINOGEN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR M.D.BATTISTEL,A.GRISHAEV,S.A.AN,F.J.CASTELLINO,M.LLINAS . 86 1 3 3 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4839.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 35 40.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 2.3 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 12 14.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 8.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 8.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 4 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -4 A S 0 0 150 0, 0.0 4,-0.1 0, 0.0 83,-0.0 0.000 360.0 360.0 360.0 173.9 4.2 36.5 -1.6 2 -3 A N - 0 0 113 2,-0.1 3,-0.1 1,-0.1 0, 0.0 0.441 360.0-112.5 -77.5 1.2 2.1 33.5 -2.8 3 -2 A A S S+ 0 0 46 1,-0.2 2,-1.1 12,-0.0 11,-0.2 0.680 77.0 135.9 77.3 23.1 2.0 32.7 0.9 4 -1 A D + 0 0 16 11,-0.2 2,-0.3 12,-0.1 -1,-0.2 -0.546 50.3 94.8 -92.4 62.4 4.0 29.5 0.6 5 1 A a S S- 0 0 7 -2,-1.1 9,-0.7 76,-0.1 78,-0.2 -0.988 71.0-116.8-153.5 151.7 6.0 30.5 3.6 6 2 A M B -a 83 0A 33 76,-2.7 78,-3.2 -2,-0.3 79,-1.6 -0.588 10.8-138.5 -96.6 156.6 5.9 29.8 7.4 7 3 A F S >>>S- 0 0 101 77,-0.2 3,-1.2 -2,-0.2 2,-0.7 -0.900 73.2 -49.5-113.3 97.8 5.3 32.2 10.3 8 4 A G T 345S+ 0 0 42 -2,-0.7 -2,-0.1 1,-0.3 76,-0.1 -0.682 134.6 2.6 78.8-114.3 7.7 31.2 13.0 9 5 A N T 345S- 0 0 48 -2,-0.7 -1,-0.3 55,-0.1 52,-0.1 0.697 108.0-100.8 -79.4 -24.7 7.5 27.5 13.5 10 6 A G T X45S+ 0 0 0 -3,-1.2 47,-1.0 54,-0.2 3,-0.7 0.602 82.0 132.4 107.5 17.7 5.0 27.0 10.7 11 7 A K T 3<5S+ 0 0 112 -4,-0.6 46,-0.2 1,-0.3 -3,-0.1 0.915 90.5 27.9 -65.5 -44.0 1.9 26.8 12.9 12 8 A G T 3 -C 79 0C 3 4,-2.5 3,-1.1 -2,-0.3 59,-0.3 -0.025 52.1 -81.6 -74.3-172.8 11.1 17.4 3.2 21 17 A V T 3 S+ 0 0 81 57,-2.3 58,-0.1 1,-0.3 -1,-0.1 0.702 136.8 48.8 -65.2 -16.8 14.5 19.1 3.7 22 18 A T T 3 S- 0 0 90 56,-0.3 -1,-0.3 2,-0.1 57,-0.1 0.574 122.9-106.6 -94.2 -13.7 15.8 16.5 1.3 23 19 A G < + 0 0 40 -3,-1.1 -2,-0.1 1,-0.3 56,-0.1 0.620 67.8 153.0 87.0 14.8 13.1 17.0 -1.2 24 20 A T - 0 0 28 1,-0.1 -4,-2.5 47,-0.0 -1,-0.3 -0.723 54.7-105.7 -75.8 119.5 11.5 13.7 -0.2 25 21 A P B -B 19 0B 64 0, 0.0 45,-2.4 0, 0.0 -6,-0.3 -0.163 30.7-120.4 -48.1 129.2 7.8 14.2 -1.0 26 22 A b B -D 69 0D 1 -8,-1.9 43,-0.3 43,-0.2 3,-0.1 -0.552 27.8-123.9 -70.0 134.8 5.5 14.7 2.0 27 23 A Q - 0 0 0 41,-3.9 2,-0.4 -2,-0.3 41,-0.4 -0.277 37.1 -84.6 -67.9 166.4 2.8 12.1 2.3 28 24 A D > - 0 0 55 5,-0.5 3,-1.1 1,-0.2 5,-0.3 -0.619 26.2-144.6 -76.1 126.0 -0.8 13.1 2.5 29 25 A W T 3 S+ 0 0 0 23,-2.3 -1,-0.2 -2,-0.4 24,-0.1 0.829 108.6 52.1 -54.8 -31.1 -1.7 14.0 6.0 30 26 A A T 3 S+ 0 0 56 22,-0.9 2,-0.3 11,-0.2 -1,-0.3 0.686 101.4 75.2 -76.2 -21.0 -4.9 12.3 5.0 31 27 A A < - 0 0 19 -3,-1.1 4,-0.1 21,-0.3 6,-0.0 -0.689 61.2-156.0-103.1 150.6 -3.2 9.1 3.7 32 28 A Q + 0 0 60 -2,-0.3 4,-0.1 4,-0.1 -1,-0.1 -0.197 53.8 154.3-103.2 35.3 -1.7 6.3 5.8 33 29 A E S S- 0 0 145 1,-0.4 -5,-0.5 -5,-0.3 -2,-0.1 -0.961 72.0 -22.6-145.3 119.6 0.4 5.7 2.8 34 30 A P S S+ 0 0 86 0, 0.0 2,-0.5 0, 0.0 -1,-0.4 -0.864 146.6 48.0 -89.4 32.1 2.9 4.4 2.7 35 31 A H S S- 0 0 14 -4,-0.1 2,-0.4 2,-0.1 -2,-0.3 -0.947 78.7-141.2-130.9 108.0 3.1 5.5 6.3 36 32 A R + 0 0 189 -2,-0.5 2,-0.2 -4,-0.1 -4,-0.1 -0.559 33.9 159.3 -73.0 123.1 0.0 4.7 8.4 37 33 A H - 0 0 5 -2,-0.4 -4,-0.1 -8,-0.1 -2,-0.1 -0.734 27.8-175.8-151.7 94.6 -0.6 7.7 10.8 38 34 A S S S+ 0 0 96 -2,-0.2 2,-0.3 -6,-0.1 3,-0.2 0.046 74.2 79.3 -75.2 29.6 -4.0 8.2 12.3 39 35 A I S S+ 0 0 88 1,-0.2 6,-0.1 -10,-0.1 4,-0.0 -0.966 84.5 23.8-141.6 151.0 -2.4 11.4 13.7 40 36 A F S S+ 0 0 36 -2,-0.3 -1,-0.2 1,-0.2 28,-0.1 0.919 85.2 140.1 51.7 47.1 -1.6 14.7 12.2 41 37 A T S > S- 0 0 12 -3,-0.2 4,-1.5 -11,-0.1 3,-0.2 -0.627 72.3-103.7 -99.3 170.9 -4.3 14.3 9.7 42 38 A P T 4 S+ 0 0 39 0, 0.0 7,-0.1 0, 0.0 8,-0.1 0.707 125.0 47.6 -63.1 -17.3 -6.7 17.1 8.5 43 39 A E T 4 S+ 0 0 162 2,-0.1 -13,-0.0 1,-0.1 -4,-0.0 0.655 113.7 42.2-102.8 -20.5 -9.3 15.4 10.7 44 40 A T T 4 S+ 0 0 57 -3,-0.2 -1,-0.1 1,-0.2 -4,-0.1 0.594 126.5 34.1 -98.5 -15.5 -7.2 14.9 13.9 45 41 A N ><> + 0 0 8 -4,-1.5 3,-2.1 5,-0.1 2,-1.8 -0.359 65.5 160.7-135.8 55.1 -5.7 18.3 13.7 46 42 A P T 3 5S+ 0 0 102 0, 0.0 -3,-0.1 0, 0.0 -1,-0.0 -0.011 72.9 61.4 -71.2 36.6 -8.4 20.6 12.2 47 43 A R T 3 5S+ 0 0 168 -2,-1.8 -2,-0.0 11,-0.0 -3,-0.0 0.399 91.3 59.8-134.8 -10.0 -6.5 23.6 13.6 48 44 A A T < 5S- 0 0 4 -3,-2.1 9,-0.3 -6,-0.1 -35,-0.1 0.218 104.6-116.7-110.6 12.6 -3.2 23.4 11.8 49 45 A G T 5 - 0 0 31 1,-0.2 2,-0.7 -4,-0.2 -37,-0.0 0.869 42.4-176.8 60.2 44.0 -4.6 23.7 8.3 50 46 A L < + 0 0 11 -5,-0.5 2,-0.4 -9,-0.2 -1,-0.2 -0.653 7.0 170.5 -80.5 111.8 -3.5 20.3 7.1 51 47 A E > - 0 0 93 -2,-0.7 3,-2.0 3,-0.4 2,-0.2 -0.982 54.7 -46.5-124.5 134.6 -4.4 19.9 3.5 52 48 A K T 3 S- 0 0 128 -2,-0.4 -23,-2.3 1,-0.3 -22,-0.9 -0.206 111.7 -41.0 50.7-107.6 -3.3 17.1 1.1 53 49 A N T 3 S+ 0 0 35 -25,-0.3 -1,-0.3 -2,-0.2 2,-0.2 0.150 92.2 137.9-137.1 14.0 0.4 16.8 1.7 54 50 A Y < - 0 0 73 -3,-2.0 -3,-0.4 1,-0.1 -36,-0.2 -0.490 66.0 -96.7 -67.4 131.0 1.4 20.4 1.9 55 51 A c + 0 0 0 -38,-3.9 -40,-0.3 -2,-0.2 2,-0.3 -0.033 54.4 167.5 -54.0 149.7 3.9 20.8 4.8 56 52 A R B -E 66 0E 3 10,-2.6 10,-2.9 -3,-0.1 -45,-0.2 -0.949 38.7-132.6-153.9 165.9 2.5 21.9 8.1 57 53 A N + 0 0 0 -47,-1.0 -44,-0.1 -9,-0.3 -48,-0.1 -0.650 30.0 163.8-127.9 79.5 3.4 22.3 11.8 58 54 A P S S+ 0 0 7 0, 0.0 -1,-0.1 0, 0.0 -9,-0.1 0.854 87.7 35.8 -59.0 -35.8 0.5 20.8 13.8 59 55 A D S S- 0 0 105 -3,-0.1 3,-0.1 -11,-0.1 -48,-0.1 0.654 106.7-129.0 -91.5 -17.3 2.7 20.6 16.9 60 56 A G - 0 0 9 1,-0.2 -50,-0.1 -50,-0.1 -49,-0.1 0.934 26.5-156.5 62.6 47.8 4.5 23.8 16.1 61 57 A D > - 0 0 60 3,-0.2 3,-1.9 1,-0.2 -1,-0.2 -0.341 18.3-129.3 -50.1 132.0 7.9 22.2 16.5 62 58 A V T 3 S+ 0 0 128 1,-0.3 -1,-0.2 -3,-0.1 -52,-0.0 0.369 105.3 65.7 -74.4 8.4 10.3 25.1 17.3 63 59 A G T 3 S- 0 0 61 1,-0.4 -1,-0.3 -54,-0.1 -2,-0.1 0.623 114.5 -95.7-100.6 -19.0 12.5 23.7 14.5 64 60 A G < - 0 0 5 -3,-1.9 -1,-0.4 16,-0.0 -3,-0.2 -0.703 57.6 -29.5 130.2 179.6 10.0 24.4 11.8 65 61 A P + 0 0 3 0, 0.0 14,-2.7 0, 0.0 -8,-0.3 -0.274 57.7 175.4 -73.9 156.8 7.3 22.8 9.7 66 62 A W E -EF 56 78E 12 -10,-2.9 -10,-2.6 12,-0.3 2,-0.3 -0.678 13.0-169.5-144.9-172.8 7.3 19.2 8.9 67 63 A b E - F 0 77E 0 10,-2.2 10,-2.0 -2,-0.2 2,-0.4 -0.945 36.6 -83.8-168.7-179.0 5.4 16.4 7.3 68 64 A Y E - F 0 76E 6 -41,-0.4 -41,-3.9 -2,-0.3 2,-0.3 -0.844 47.9-130.8-100.8 144.8 5.2 12.7 6.9 69 65 A T B -D 26 0D 0 6,-2.0 -43,-0.2 -2,-0.4 -50,-0.0 -0.709 14.7-141.8-102.9 146.2 7.5 11.3 4.2 70 66 A T S S+ 0 0 55 -45,-2.4 -44,-0.1 -2,-0.3 -1,-0.1 0.031 74.4 117.1 -81.9 27.7 6.7 8.9 1.4 71 67 A N - 0 0 32 3,-0.4 3,-0.5 -46,-0.1 -2,-0.2 -0.868 65.4-146.6-102.1 120.6 10.2 7.7 2.3 72 68 A P S S+ 0 0 122 0, 0.0 3,-0.1 0, 0.0 -1,-0.1 0.463 94.5 66.4 -65.7 0.0 10.5 4.0 3.6 73 69 A R S S+ 0 0 214 1,-0.3 2,-0.3 2,-0.0 -3,-0.0 0.923 109.8 14.8 -84.2 -53.4 13.4 5.2 5.8 74 70 A K - 0 0 65 -3,-0.5 -3,-0.4 1,-0.1 -1,-0.3 -0.933 59.6-138.0-131.6 149.8 11.6 7.6 8.2 75 71 A L S S+ 0 0 65 -2,-0.3 -6,-2.0 1,-0.2 2,-0.3 0.922 86.4 1.8 -69.9 -45.8 8.0 8.3 9.2 76 72 A Y E +F 68 0E 111 -8,-0.3 2,-0.3 -6,-0.1 -8,-0.3 -0.926 62.3 171.1-142.7 162.3 8.3 12.0 9.2 77 73 A D E -F 67 0E 31 -10,-2.0 -10,-2.2 -2,-0.3 2,-0.2 -0.905 36.6 -82.4-156.9-178.0 10.8 14.8 8.6 78 74 A Y E -F 66 0E 80 -2,-0.3 -57,-2.3 -12,-0.3 -56,-0.3 -0.633 37.0-135.6 -98.0 155.7 11.1 18.6 8.3 79 75 A c B -C 20 0C 11 -14,-2.7 2,-0.4 -59,-0.3 -58,-0.2 -0.511 12.6-123.2-103.8 173.7 10.3 20.6 5.2 80 76 A D + 0 0 108 -61,-0.8 -62,-0.1 -60,-0.3 -14,-0.1 -0.651 49.1 146.5-119.7 71.5 12.1 23.5 3.6 81 77 A V - 0 0 6 -2,-0.4 -75,-0.1 -16,-0.1 -76,-0.1 -0.941 47.0-115.1-108.5 130.0 9.7 26.4 3.4 82 78 A P - 0 0 62 0, 0.0 -76,-2.7 0, 0.0 2,-0.7 -0.121 34.5 -95.0 -58.8 153.9 10.9 30.0 3.8 83 79 A Q B -a 6 0A 63 -78,-0.2 3,-0.3 1,-0.2 -76,-0.2 -0.630 35.0-176.3 -75.6 112.6 10.0 32.2 6.6 84 80 A a S S+ 0 0 39 -78,-3.2 2,-1.9 -2,-0.7 -77,-0.2 0.882 80.8 62.5 -75.4 -40.8 7.0 34.3 5.6 85 81 A A 0 0 58 -79,-1.6 -1,-0.2 -3,-0.1 -77,-0.1 -0.396 360.0 360.0 -83.7 59.6 7.1 36.2 8.9 86 82 A A 0 0 141 -2,-1.9 -1,-0.1 -3,-0.3 -79,-0.0 -0.845 360.0 360.0-135.1 360.0 10.6 37.6 8.1