==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=23-JUL-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN BINDING 07-SEP-09 2KNX . COMPND 2 MOLECULE: PROLOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTE . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR M.GUTTMAN,E.KOMIVES . 50 1 3 3 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3798.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 24 48.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 5 10.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 10.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 22.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 4.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 123 0, 0.0 4,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -98.3 -18.4 5.8 6.0 2 2 A S > - 0 0 91 1,-0.2 3,-0.9 2,-0.1 2,-0.5 0.998 360.0-152.8 60.9 73.7 -15.0 5.8 4.4 3 3 A E T 3 S- 0 0 185 1,-0.3 -1,-0.2 2,-0.1 0, 0.0 -0.660 74.3 -9.8 -81.6 125.6 -15.7 7.2 1.0 4 4 A G T 3 S+ 0 0 52 -2,-0.5 -1,-0.3 2,-0.1 -2,-0.1 0.799 103.5 122.9 58.4 28.9 -13.2 6.1 -1.6 5 5 A K X + 0 0 97 -3,-0.9 3,-0.6 -4,-0.1 2,-0.1 0.960 52.8 58.7 -82.2 -74.6 -11.1 4.6 1.1 6 6 A T T 3 S- 0 0 117 -4,-0.3 15,-0.1 1,-0.2 -1,-0.1 -0.383 125.7 -3.0 -61.7 128.1 -10.6 0.9 0.2 7 7 A a T 3 S- 0 0 65 -2,-0.1 -1,-0.2 5,-0.1 4,-0.2 0.975 90.3-173.5 52.0 67.7 -9.0 0.5 -3.2 8 8 A G X - 0 0 15 -3,-0.6 3,-0.9 2,-0.2 -3,-0.1 0.227 47.6 -62.5 -72.7-158.7 -8.8 4.2 -4.1 9 9 A P T 3 S+ 0 0 139 0, 0.0 2,-0.4 0, 0.0 -1,-0.0 0.890 139.6 35.0 -56.5 -41.5 -7.7 5.6 -7.4 10 10 A S T 3 S+ 0 0 59 2,-0.0 13,-0.9 0, 0.0 2,-0.5 -0.572 83.2 170.9-114.2 66.0 -4.2 4.1 -7.0 11 11 A S E < -A 22 0A 61 -3,-0.9 2,-0.3 -2,-0.4 -5,-0.0 -0.672 17.4-155.3 -81.8 122.0 -5.0 0.9 -5.2 12 12 A F E -A 21 0A 46 9,-3.1 9,-1.1 -2,-0.5 2,-0.5 -0.744 7.9-136.0 -98.1 144.3 -2.1 -1.5 -4.9 13 13 A S E -A 20 0A 66 -2,-0.3 7,-0.2 7,-0.2 5,-0.1 -0.857 16.2-125.1-104.2 132.5 -2.4 -5.2 -4.5 14 14 A b E > > -A 19 0A 0 5,-3.0 3,-0.8 -2,-0.5 5,-0.6 -0.558 32.7-113.1 -74.9 131.1 -0.4 -7.2 -2.0 15 15 A P T 3 5S+ 0 0 64 0, 0.0 19,-0.2 0, 0.0 20,-0.2 -0.130 98.2 28.1 -60.2 158.8 1.6 -10.2 -3.6 16 16 A G T 3 5S+ 0 0 92 1,-0.1 2,-0.3 18,-0.1 -2,-0.1 0.734 126.5 42.4 60.6 21.9 0.7 -13.7 -2.7 17 17 A T T < 5S- 0 0 62 -3,-0.8 2,-0.4 2,-0.1 -1,-0.1 -0.964 87.1-105.5-179.3 168.9 -2.9 -12.5 -2.1 18 18 A H T 5 + 0 0 177 -2,-0.3 2,-0.5 -5,-0.1 -2,-0.0 -0.448 62.5 136.0-110.0 59.2 -5.7 -10.3 -3.4 19 19 A V E < -A 14 0A 45 -5,-0.6 -5,-3.0 -2,-0.4 2,-0.1 -0.923 39.9-149.8-110.3 122.7 -5.6 -7.4 -0.9 20 20 A a E -A 13 0A 44 -2,-0.5 -7,-0.2 -7,-0.2 -9,-0.1 -0.455 11.6-172.7 -86.8 161.7 -5.8 -3.9 -2.1 21 21 A V E -A 12 0A 1 -9,-1.1 -9,-3.1 -2,-0.1 5,-0.1 -0.814 24.2-123.0-158.6 112.0 -4.2 -0.8 -0.6 22 22 A P E >> -A 11 0A 15 0, 0.0 3,-2.6 0, 0.0 4,-1.4 -0.183 30.3-113.1 -54.5 144.7 -4.7 2.9 -1.6 23 23 A E T 34 S+ 0 0 105 -13,-0.9 -12,-0.1 1,-0.3 3,-0.1 0.816 119.1 65.1 -48.8 -32.1 -1.6 4.8 -2.5 24 24 A R T 34 S+ 0 0 208 1,-0.2 -1,-0.3 4,-0.0 -13,-0.1 0.824 107.1 40.7 -61.3 -31.0 -2.2 6.8 0.6 25 25 A W T X4 S+ 0 0 87 -3,-2.6 3,-1.4 4,-0.1 4,-0.3 0.655 89.5 112.9 -89.9 -19.3 -1.6 3.6 2.6 26 26 A L T 3< S- 0 0 16 -4,-1.4 13,-0.2 1,-0.3 5,-0.1 -0.376 99.2 -10.9 -58.8 119.6 1.3 2.6 0.4 27 27 A c T 3 S+ 0 0 42 11,-0.3 -1,-0.3 -2,-0.2 12,-0.1 0.933 95.4 132.9 53.6 50.7 4.5 2.7 2.6 28 28 A D S < S- 0 0 78 -3,-1.4 -2,-0.1 2,-0.2 -1,-0.1 0.545 81.5 -97.1-104.6 -13.2 2.6 4.6 5.3 29 29 A G S S+ 0 0 54 -4,-0.3 2,-1.0 1,-0.1 -3,-0.1 0.027 97.0 103.1 119.9 -26.3 3.9 2.4 8.2 30 30 A D S S- 0 0 107 -5,-0.3 2,-1.5 8,-0.0 -2,-0.2 -0.776 70.5-138.3 -94.6 98.5 1.0 0.0 8.6 31 31 A K + 0 0 121 -2,-1.0 5,-0.1 1,-0.2 6,-0.1 -0.336 35.0 165.5 -57.4 88.9 2.0 -3.2 7.0 32 32 A D + 0 0 47 -2,-1.5 2,-0.2 -7,-0.2 -1,-0.2 0.821 55.0 76.6 -76.7 -32.3 -1.3 -4.0 5.2 33 33 A b S > S- 0 0 3 -3,-0.2 3,-2.8 1,-0.1 6,-0.1 -0.552 93.1-117.0 -81.7 144.2 0.3 -6.7 3.0 34 34 A A T 3 S+ 0 0 77 1,-0.3 -1,-0.1 -19,-0.2 -18,-0.1 0.826 119.5 28.7 -46.8 -37.2 1.1 -10.1 4.5 35 35 A D T 3 S- 0 0 124 -20,-0.2 -1,-0.3 5,-0.0 -3,-0.1 -0.030 117.8-104.9-115.7 29.3 4.8 -9.4 3.8 36 36 A G X + 0 0 3 -3,-2.8 3,-0.9 -5,-0.1 -2,-0.1 0.806 67.5 153.6 53.0 31.3 4.6 -5.6 4.1 37 37 A A G > + 0 0 4 1,-0.3 3,-2.8 2,-0.2 6,-1.1 0.920 68.4 56.3 -55.2 -47.3 4.9 -5.4 0.3 38 38 A D G 3 S+ 0 0 0 1,-0.3 -11,-0.3 4,-0.2 -1,-0.3 0.789 108.8 48.8 -56.1 -28.1 3.1 -2.1 0.3 39 39 A E G < S+ 0 0 57 -3,-0.9 -1,-0.3 -13,-0.2 2,-0.2 0.247 112.6 60.2 -95.7 11.3 5.9 -0.9 2.6 40 40 A S S X>>S- 0 0 68 -3,-2.8 3,-1.8 1,-0.0 5,-0.9 -0.742 102.9 -89.3-129.5 178.0 8.6 -2.3 0.4 41 41 A I G >45S+ 0 0 95 1,-0.3 3,-0.6 -2,-0.2 5,-0.1 0.725 113.1 81.6 -60.9 -20.7 9.9 -1.9 -3.1 42 42 A A G 345S+ 0 0 65 1,-0.3 -1,-0.3 -5,-0.2 -4,-0.2 0.817 96.4 42.5 -54.4 -31.7 7.4 -4.7 -4.1 43 43 A A G <45S- 0 0 26 -3,-1.8 -1,-0.3 -6,-1.1 -2,-0.2 0.677 129.2 -97.1 -88.3 -20.5 4.8 -1.9 -4.2 44 44 A G T <<5S+ 0 0 45 -4,-0.6 2,-1.1 -3,-0.6 3,-0.4 0.687 73.0 144.9 109.5 28.1 7.1 0.5 -6.0 45 45 A c < + 0 0 21 -5,-0.9 -3,-0.1 1,-0.2 -4,-0.1 -0.526 19.9 129.8 -96.4 66.2 8.4 2.6 -3.1 46 46 A L + 0 0 125 -2,-1.1 -1,-0.2 -5,-0.1 2,-0.1 0.894 41.7 93.9 -83.5 -45.4 11.9 3.2 -4.5 47 47 A Y + 0 0 173 -3,-0.4 -3,-0.0 1,-0.2 0, 0.0 -0.292 47.0 116.1 -53.3 119.9 12.0 7.0 -4.1 48 48 A N + 0 0 131 -2,-0.1 -1,-0.2 0, 0.0 -2,-0.1 0.257 30.6 176.1-147.0 -76.7 13.7 7.7 -0.7 49 49 A S 0 0 105 0, 0.0 -2,-0.0 0, 0.0 0, 0.0 0.923 360.0 360.0 53.6 99.4 17.0 9.5 -0.6 50 50 A T 0 0 195 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.212 360.0 360.0 59.7 360.0 17.9 10.1 3.1