==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=10-MAR-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE 30-SEP-09 2KOU . COMPND 2 MOLECULE: DICER-LIKE PROTEIN 4; . SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; . AUTHOR H.QIN,J.SONG,Y.A.YUAN . 102 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7075.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 60 58.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 14 13.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 4.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 10.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 29 28.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A I 0 0 229 0, 0.0 2,-0.9 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 105.9 34.6 -10.8 0.5 2 2 A S + 0 0 138 2,-0.0 2,-0.2 0, 0.0 0, 0.0 -0.822 360.0 156.5 -99.3 98.9 34.4 -14.4 1.6 3 3 A G + 0 0 67 -2,-0.9 2,-0.0 1,-0.1 0, 0.0 -0.461 14.9 123.2-111.0-176.0 30.8 -15.3 2.4 4 4 A G S >> S+ 0 0 16 -2,-0.2 4,-1.7 94,-0.1 3,-0.8 -0.423 76.9 48.7 162.8 -76.6 28.7 -18.4 2.5 5 5 A S H 3> S+ 0 0 109 1,-0.3 4,-0.7 2,-0.2 91,-0.1 0.822 109.3 59.4 -60.5 -32.2 26.9 -19.1 5.8 6 6 A S H 3> S+ 0 0 80 1,-0.2 4,-1.4 2,-0.2 3,-0.4 0.825 102.6 53.0 -65.4 -32.4 25.7 -15.5 5.7 7 7 A I H <>>S+ 0 0 50 -3,-0.8 4,-4.8 1,-0.2 5,-0.5 0.929 94.2 67.6 -68.0 -46.9 24.0 -16.3 2.4 8 8 A S H X5S+ 0 0 3 -4,-1.7 4,-0.9 1,-0.3 -1,-0.2 0.787 107.3 43.5 -42.5 -31.6 22.2 -19.3 3.8 9 9 A M H X5S+ 0 0 70 -4,-0.7 4,-0.7 -3,-0.4 -1,-0.3 0.868 117.6 42.5 -82.6 -41.4 20.4 -16.6 5.8 10 10 A M H >X5S+ 0 0 51 -4,-1.4 4,-1.0 1,-0.2 3,-0.5 0.870 113.8 52.1 -72.1 -39.1 19.9 -14.2 2.9 11 11 A Y H 3X5S+ 0 0 62 -4,-4.8 4,-3.0 1,-0.2 3,-0.5 0.861 97.5 66.6 -64.9 -37.5 18.9 -16.9 0.5 12 12 A K H 3<< S+ 0 0 6 -4,-1.0 3,-2.9 -3,-0.5 -2,-0.2 0.810 97.9 74.0 -73.3 -31.1 14.6 -15.5 -1.5 15 15 A S T 3< S+ 0 0 18 -4,-3.0 -1,-0.2 1,-0.3 -2,-0.2 0.693 77.4 79.2 -54.6 -17.9 13.6 -19.1 -0.9 16 16 A R T < S+ 0 0 45 -3,-0.9 -1,-0.3 -4,-0.4 -2,-0.2 0.515 72.0 119.0 -68.7 -3.9 10.2 -17.6 -0.2 17 17 A L S < S- 0 0 25 -3,-2.9 6,-0.2 85,-0.2 5,-0.0 -0.098 74.4-123.3 -58.7 162.7 9.9 -17.4 -4.0 18 18 A P S S+ 0 0 55 0, 0.0 5,-0.2 0, 0.0 -1,-0.1 0.925 109.8 60.6 -74.9 -48.1 7.1 -19.3 -5.7 19 19 A H S S+ 0 0 175 3,-0.1 2,-0.4 2,-0.1 -4,-0.1 0.724 89.4 96.0 -51.4 -21.2 9.3 -21.4 -7.9 20 20 A D > - 0 0 23 -6,-0.2 3,-0.8 1,-0.2 82,-0.0 -0.603 64.5-160.0 -76.7 127.6 10.7 -22.6 -4.6 21 21 A E T 3 S+ 0 0 171 -2,-0.4 -1,-0.2 1,-0.2 -2,-0.1 0.684 94.9 54.0 -78.7 -20.0 9.0 -25.9 -3.5 22 22 A F T 3 S+ 0 0 147 -7,-0.1 2,-0.4 2,-0.1 -1,-0.2 0.281 83.9 117.3 -95.4 8.1 10.2 -25.2 0.1 23 23 A F < - 0 0 64 -3,-0.8 -7,-0.1 -5,-0.2 -8,-0.0 -0.655 56.5-144.8 -81.9 128.5 8.5 -21.7 -0.0 24 24 A Q - 0 0 122 -2,-0.4 2,-0.4 1,-0.1 -2,-0.1 -0.603 24.8 -98.7 -92.5 153.9 5.7 -21.2 2.4 25 25 A P S S+ 0 0 87 0, 0.0 3,-0.1 0, 0.0 -1,-0.1 -0.593 96.1 68.3 -75.0 122.5 2.6 -19.2 1.8 26 26 A K S S+ 0 0 97 1,-0.7 24,-0.1 -2,-0.4 23,-0.1 -0.142 76.7 80.1 166.9 -52.8 2.8 -15.7 3.3 27 27 A P - 0 0 20 0, 0.0 -1,-0.7 0, 0.0 2,-0.3 -0.224 62.3-147.2 -75.0 168.2 5.5 -13.8 1.4 28 28 A E E -A 45 0A 85 17,-0.6 17,-0.8 -3,-0.1 2,-0.4 -0.984 7.4-161.1-139.8 149.1 4.9 -12.1 -2.0 29 29 A F E +A 44 0A 75 -2,-0.3 2,-0.4 15,-0.2 15,-0.2 -0.998 12.1 170.3-135.4 133.1 7.0 -11.4 -5.0 30 30 A Q E -A 43 0A 88 13,-1.6 13,-3.7 -2,-0.4 2,-0.4 -0.991 12.7-160.8-144.9 132.7 6.4 -8.9 -7.8 31 31 A F E -A 42 0A 50 -2,-0.4 11,-0.2 11,-0.2 32,-0.1 -0.934 2.9-159.6-117.3 137.4 8.7 -7.8 -10.7 32 32 A K E -A 41 0A 120 9,-2.9 9,-3.1 -2,-0.4 2,-0.4 -0.943 14.1-144.4-119.7 109.4 8.3 -4.6 -12.7 33 33 A P E +A 40 0A 105 0, 0.0 2,-0.3 0, 0.0 7,-0.2 -0.578 30.0 166.9 -75.1 126.1 10.1 -4.6 -16.1 34 34 A V - 0 0 69 5,-0.7 4,-0.0 -2,-0.4 -2,-0.0 -0.861 38.9 -81.8-134.4 167.7 11.5 -1.2 -17.0 35 35 A D > - 0 0 122 -2,-0.3 3,-2.1 1,-0.1 -1,-0.1 -0.122 50.1 -98.6 -64.0 166.4 13.9 0.2 -19.6 36 36 A E G > S+ 0 0 162 1,-0.3 3,-0.6 2,-0.2 -1,-0.1 0.634 117.0 82.4 -61.8 -13.0 17.7 -0.0 -19.0 37 37 A F G 3 S+ 0 0 193 1,-0.2 -1,-0.3 2,-0.1 -2,-0.1 0.536 117.0 7.5 -69.0 -5.9 17.3 3.6 -17.8 38 38 A G G < S- 0 0 25 -3,-2.1 -1,-0.2 1,-0.2 -2,-0.2 0.044 92.7-139.9-165.9 34.9 16.3 2.0 -14.5 39 39 A G < - 0 0 9 -3,-0.6 -5,-0.7 20,-0.1 2,-0.3 -0.024 60.7 -33.4 36.6-124.2 16.8 -1.7 -14.8 40 40 A T E -AB 33 60A 9 20,-2.5 19,-0.6 22,-0.3 2,-0.6 -0.925 53.1-127.3-127.4 151.9 13.9 -3.5 -13.2 41 41 A I E -AB 32 58A 40 -9,-3.1 -9,-2.9 -2,-0.3 2,-0.5 -0.884 20.3-153.8-102.4 119.6 11.8 -2.6 -10.2 42 42 A C E -AB 31 57A 2 15,-0.7 15,-0.9 -2,-0.6 2,-0.6 -0.813 8.6-168.2 -95.2 127.5 11.5 -5.3 -7.5 43 43 A R E +AB 30 56A 91 -13,-3.7 -13,-1.6 -2,-0.5 2,-0.4 -0.942 10.7 171.9-121.2 109.4 8.4 -5.3 -5.4 44 44 A I E +AB 29 55A 18 11,-0.9 11,-0.8 -2,-0.6 2,-0.4 -0.951 4.2 178.6-119.6 136.7 8.3 -7.5 -2.4 45 45 A T E -A 28 0A 52 -17,-0.8 -17,-0.6 -2,-0.4 7,-0.1 -0.989 12.2-152.9-141.3 128.3 5.6 -7.4 0.3 46 46 A L - 0 0 27 -2,-0.4 7,-0.1 -19,-0.2 8,-0.1 -0.511 30.5 -93.8 -94.9 165.5 5.3 -9.6 3.4 47 47 A P > - 0 0 27 0, 0.0 3,-3.9 0, 0.0 -1,-0.1 -0.280 40.8 -99.2 -75.1 163.4 2.1 -10.6 5.2 48 48 A A T 3 S+ 0 0 108 1,-0.3 -2,-0.0 -22,-0.0 -22,-0.0 0.712 122.3 74.7 -53.7 -19.4 0.7 -8.7 8.2 49 49 A N T 3 S+ 0 0 99 -23,-0.1 -1,-0.3 38,-0.0 38,-0.1 0.666 96.0 58.1 -67.4 -16.1 2.4 -11.4 10.1 50 50 A A < - 0 0 11 -3,-3.9 3,-0.1 1,-0.2 -4,-0.1 -0.933 69.6-156.3-119.4 141.4 5.6 -9.6 9.3 51 51 A P S S+ 0 0 50 0, 0.0 2,-0.2 0, 0.0 -1,-0.2 0.978 73.6 3.7 -75.0 -80.0 6.5 -6.0 10.1 52 52 A I S S+ 0 0 43 25,-0.2 3,-0.1 1,-0.1 30,-0.1 -0.571 72.7 110.2-104.7 169.9 9.1 -4.8 7.6 53 53 A S + 0 0 1 1,-0.4 2,-0.1 -2,-0.2 -1,-0.1 0.116 43.2 127.9 149.5 -17.9 10.5 -6.6 4.6 54 54 A E - 0 0 94 -3,-0.2 -1,-0.4 23,-0.1 2,-0.4 -0.439 31.7-179.6 -68.2 136.3 9.0 -4.7 1.7 55 55 A I E +B 44 0A 18 -11,-0.8 -11,-0.9 -2,-0.1 2,-0.5 -0.921 7.7 172.9-144.1 113.1 11.6 -3.4 -0.8 56 56 A E E +B 43 0A 122 -2,-0.4 2,-0.2 -13,-0.2 -13,-0.2 -0.947 34.4 96.1-126.4 110.0 10.7 -1.4 -3.9 57 57 A S E -B 42 0A 75 -15,-0.9 -15,-0.7 -2,-0.5 13,-0.2 -0.753 61.0-112.5 172.5 139.9 13.4 0.1 -6.0 58 58 A S E +B 41 0A 47 -2,-0.2 -17,-0.2 -17,-0.2 -19,-0.1 -0.279 47.0 136.1 -77.6 167.1 15.4 -0.7 -9.1 59 59 A L E + 0 0 106 -19,-0.6 -1,-0.1 1,-0.5 -20,-0.1 0.135 62.4 59.0-178.5 -34.8 19.1 -1.6 -9.2 60 60 A L E -B 40 0A 43 -20,-0.5 -20,-2.5 2,-0.2 -1,-0.5 -0.931 67.4-140.5-118.3 140.4 19.5 -4.5 -11.5 61 61 A P S S+ 0 0 100 0, 0.0 2,-0.3 0, 0.0 -27,-0.1 0.428 88.4 73.6 -75.1 1.6 18.6 -4.6 -15.2 62 62 A S S > S- 0 0 60 -22,-0.1 4,-3.4 1,-0.1 -22,-0.3 -0.897 74.4-143.0-118.7 147.6 17.4 -8.2 -14.5 63 63 A T H > S+ 0 0 42 -2,-0.3 4,-3.0 2,-0.2 5,-0.2 0.917 104.2 51.4 -71.3 -45.8 14.3 -9.3 -12.6 64 64 A E H > S+ 0 0 144 2,-0.2 4,-1.0 1,-0.2 -1,-0.2 0.890 121.4 34.3 -57.8 -42.1 16.0 -12.3 -11.0 65 65 A A H > S+ 0 0 25 2,-0.2 4,-2.0 1,-0.2 -2,-0.2 0.921 114.3 56.7 -78.2 -48.2 18.8 -10.0 -9.8 66 66 A A H X S+ 0 0 0 -4,-3.4 4,-1.7 1,-0.3 -24,-0.2 0.871 110.0 47.6 -49.8 -40.9 16.5 -7.0 -9.2 67 67 A K H X S+ 0 0 27 -4,-3.0 4,-3.2 1,-0.2 -1,-0.3 0.855 104.6 59.8 -68.9 -36.2 14.5 -9.3 -6.9 68 68 A K H X S+ 0 0 87 -4,-1.0 4,-3.3 -5,-0.2 -1,-0.2 0.844 104.4 52.5 -59.7 -34.6 17.8 -10.4 -5.3 69 69 A D H X S+ 0 0 35 -4,-2.0 4,-4.4 2,-0.2 5,-0.3 0.991 114.3 37.6 -64.1 -63.6 18.3 -6.8 -4.4 70 70 A A H X S+ 0 0 0 -4,-1.7 4,-2.4 1,-0.2 -2,-0.2 0.849 119.4 52.1 -56.3 -35.7 15.0 -6.2 -2.7 71 71 A C H X S+ 0 0 2 -4,-3.2 4,-2.0 2,-0.2 -1,-0.2 0.932 114.2 41.3 -65.9 -47.1 15.3 -9.7 -1.4 72 72 A L H X S+ 0 0 65 -4,-3.3 4,-1.9 2,-0.2 -2,-0.2 0.928 118.1 46.3 -65.5 -46.8 18.7 -9.0 0.0 73 73 A K H X S+ 0 0 114 -4,-4.4 4,-2.8 1,-0.2 -2,-0.2 0.829 109.6 56.8 -64.0 -32.6 17.6 -5.6 1.2 74 74 A A H X S+ 0 0 0 -4,-2.4 4,-1.8 -5,-0.3 -1,-0.2 0.908 104.0 51.9 -64.5 -43.5 14.5 -7.3 2.7 75 75 A V H X S+ 0 0 8 -4,-2.0 4,-2.9 2,-0.2 -2,-0.2 0.925 111.7 46.6 -58.2 -47.3 16.7 -9.6 4.7 76 76 A H H X S+ 0 0 107 -4,-1.9 4,-4.5 2,-0.3 5,-0.4 0.928 109.8 53.1 -60.4 -47.6 18.6 -6.7 6.1 77 77 A E H X S+ 0 0 79 -4,-2.8 4,-0.7 1,-0.3 5,-0.3 0.809 117.3 39.3 -57.3 -31.2 15.4 -4.8 6.8 78 78 A L H X S+ 0 0 19 -4,-1.8 4,-0.9 3,-0.2 -1,-0.3 0.758 116.9 50.6 -88.1 -29.7 14.3 -7.9 8.7 79 79 A H H < S+ 0 0 120 -4,-2.9 -2,-0.2 -5,-0.2 -3,-0.2 0.922 107.8 51.4 -72.8 -46.6 17.7 -8.5 10.2 80 80 A N H < S+ 0 0 147 -4,-4.5 -1,-0.2 -5,-0.1 -2,-0.2 0.857 131.1 20.0 -58.0 -36.5 18.0 -4.9 11.4 81 81 A L H < S+ 0 0 88 -4,-0.7 -2,-0.2 -5,-0.4 -3,-0.2 0.874 72.2 167.8 -94.8 -77.3 14.6 -5.4 13.1 82 82 A G < + 0 0 24 -4,-0.9 3,-0.2 -5,-0.3 -3,-0.1 0.972 23.4 139.8 56.9 60.8 13.9 -9.1 13.4 83 83 A V S S+ 0 0 83 1,-0.1 3,-0.2 2,-0.1 -1,-0.1 0.506 70.6 49.8-106.5 -12.4 10.9 -8.7 15.7 84 84 A L >> + 0 0 54 -6,-0.2 3,-2.6 1,-0.1 4,-1.1 -0.083 65.6 127.9-115.5 29.9 8.9 -11.4 14.1 85 85 A N T 34 S+ 0 0 100 1,-0.3 -1,-0.1 2,-0.2 -2,-0.1 0.673 70.7 64.7 -59.1 -15.9 11.7 -14.0 14.2 86 86 A D T 34 S+ 0 0 152 -3,-0.2 -1,-0.3 1,-0.2 -2,-0.1 0.711 100.9 48.7 -78.8 -22.2 9.0 -16.1 15.8 87 87 A F T <4 S+ 0 0 44 -3,-2.6 2,-0.3 -38,-0.1 -2,-0.2 0.692 109.9 60.4 -88.1 -22.8 7.1 -16.0 12.5 88 88 A L S < S- 0 0 34 -4,-1.1 0, 0.0 1,-0.1 0, 0.0 -0.759 100.1 -92.4-106.7 153.4 10.1 -16.9 10.5 89 89 A L - 0 0 85 -2,-0.3 -2,-0.1 1,-0.1 -3,-0.1 -0.429 44.1-138.9 -65.2 132.5 12.2 -20.1 10.7 90 90 A P >> - 0 0 77 0, 0.0 3,-1.3 0, 0.0 4,-0.7 0.181 46.5 -66.1 -75.0-161.4 15.1 -19.7 13.0 91 91 A D H 3> S+ 0 0 97 1,-0.3 4,-0.6 2,-0.2 -2,-0.1 0.708 126.6 78.6 -62.3 -19.4 18.7 -20.9 12.5 92 92 A S H >4 S+ 0 0 73 1,-0.3 3,-0.7 2,-0.2 -1,-0.3 0.899 100.4 36.7 -55.1 -44.1 17.1 -24.3 12.8 93 93 A K H <4 S+ 0 0 92 -3,-1.3 -1,-0.3 1,-0.2 -2,-0.2 0.615 106.7 69.5 -82.8 -14.7 15.9 -24.0 9.2 94 94 A D H 3< + 0 0 31 -4,-0.7 2,-3.8 1,-0.2 -1,-0.2 0.545 66.7 107.9 -78.2 -7.9 19.1 -22.3 8.4 95 95 A E << + 0 0 146 -3,-0.7 2,-0.3 -4,-0.6 -1,-0.2 -0.286 63.3 93.0 -68.9 60.0 20.8 -25.6 9.0 96 96 A I S S- 0 0 52 -2,-3.8 -88,-0.1 -91,-0.1 2,-0.1 -0.894 84.1 -77.2-145.1 172.0 21.3 -25.9 5.2 97 97 A E > - 0 0 120 -2,-0.3 4,-2.7 1,-0.1 -93,-0.0 -0.378 36.2-121.8 -73.4 152.5 23.9 -25.1 2.6 98 98 A D T 4 S+ 0 0 44 1,-0.2 -1,-0.1 2,-0.2 -87,-0.1 0.872 118.5 41.4 -60.3 -38.3 24.4 -21.6 1.4 99 99 A E T 4 S+ 0 0 154 1,-0.2 -1,-0.2 3,-0.1 -95,-0.0 0.837 109.5 59.0 -77.1 -35.4 23.6 -22.8 -2.1 100 100 A L T 4 S+ 0 0 123 2,-0.1 -2,-0.2 0, 0.0 -1,-0.2 0.933 95.4 77.2 -58.1 -49.0 20.8 -25.0 -0.9 101 101 A S < 0 0 4 -4,-2.7 -89,-0.1 1,-0.2 -92,-0.1 0.028 360.0 360.0 -55.2 170.1 19.0 -22.0 0.5 102 102 A D 0 0 64 -94,-0.2 -1,-0.2 -93,-0.1 -85,-0.2 -0.171 360.0 360.0 60.1 360.0 17.1 -19.7 -1.7