==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=22-JUL-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER MEMBRANE PROTEIN 13-OCT-09 2KPF . COMPND 2 MOLECULE: GLYCOPHORIN-A; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR K.S.MINEEV,E.V.BOCHAROV,M.V.GONCHARUK,A.S.ARSENIEV,P.E.VOLYN . 76 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7914.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 54 71.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 7.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 44 57.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 61 A R 0 0 292 0, 0.0 2,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 51.5 2.1 0.0 -1.2 2 62 A V - 0 0 122 1,-0.0 2,-0.1 0, 0.0 0, 0.0 -0.813 360.0-140.8-100.4 135.8 5.6 0.2 0.3 3 63 A Q - 0 0 163 -2,-0.4 2,-0.3 1,-0.0 3,-0.1 -0.234 14.7-156.5 -84.3 177.1 8.6 -1.1 -1.5 4 64 A L + 0 0 149 1,-0.2 3,-0.1 3,-0.1 -1,-0.0 -0.986 50.7 47.1-153.4 158.6 11.6 -2.9 0.0 5 65 A A S S- 0 0 92 -2,-0.3 2,-1.0 1,-0.1 -1,-0.2 0.893 75.7-115.1 72.2 100.3 15.3 -3.6 -0.6 6 66 A H S S+ 0 0 199 -3,-0.1 2,-0.3 2,-0.0 -1,-0.1 -0.520 75.7 91.8 -68.7 100.3 17.3 -0.5 -1.6 7 67 A H S S- 0 0 174 -2,-1.0 2,-0.2 -3,-0.1 -3,-0.1 -0.951 75.8 -84.4-179.4 163.4 18.3 -1.3 -5.2 8 68 A F + 0 0 141 -2,-0.3 2,-0.3 3,-0.0 -2,-0.0 -0.514 50.2 154.4 -82.7 150.4 17.4 -1.0 -8.9 9 69 A S + 0 0 58 1,-0.2 -2,-0.0 -2,-0.2 -1,-0.0 -0.905 35.7 64.7-158.2-176.5 15.0 -3.4 -10.6 10 70 A E > - 0 0 145 -2,-0.3 3,-0.5 1,-0.1 -1,-0.2 0.980 48.3-173.8 51.6 69.7 12.5 -3.9 -13.4 11 71 A P T > + 0 0 90 0, 0.0 3,-0.6 0, 0.0 4,-0.2 0.545 68.7 88.5 -69.7 -6.3 15.0 -3.5 -16.3 12 72 A E T 3> + 0 0 58 1,-0.2 4,-2.2 2,-0.1 5,-0.2 0.101 51.5 119.3 -80.3 24.8 12.0 -3.6 -18.6 13 73 A I H <> S+ 0 0 89 -3,-0.5 4,-2.2 1,-0.2 -1,-0.2 0.958 71.6 49.3 -53.7 -57.6 11.7 0.1 -18.2 14 74 A T H <> S+ 0 0 113 -3,-0.6 4,-3.2 1,-0.2 -1,-0.2 0.887 108.7 55.2 -50.0 -44.0 12.2 0.9 -21.9 15 75 A L H > S+ 0 0 38 1,-0.2 4,-2.8 2,-0.2 -1,-0.2 0.936 106.5 49.6 -56.1 -50.0 9.6 -1.7 -22.8 16 76 A I H X S+ 0 0 52 -4,-2.2 4,-2.2 1,-0.2 -1,-0.2 0.915 114.1 45.6 -56.1 -46.2 7.0 -0.0 -20.6 17 77 A I H X S+ 0 0 95 -4,-2.2 4,-2.7 2,-0.2 -2,-0.2 0.944 112.1 50.4 -63.2 -50.0 7.7 3.3 -22.2 18 78 A F H X S+ 0 0 129 -4,-3.2 4,-2.9 2,-0.2 5,-0.2 0.924 110.6 50.5 -54.7 -48.3 7.7 2.0 -25.7 19 79 A G H X S+ 0 0 0 -4,-2.8 4,-2.7 1,-0.2 5,-0.2 0.952 113.8 42.4 -55.9 -54.6 4.4 0.3 -25.1 20 80 A V H X S+ 0 0 43 -4,-2.2 4,-2.6 1,-0.2 5,-0.2 0.846 114.1 54.1 -61.7 -34.7 2.6 3.3 -23.7 21 81 A M H X S+ 0 0 110 -4,-2.7 4,-2.0 -5,-0.2 5,-0.2 0.928 111.7 42.8 -65.7 -46.5 4.3 5.4 -26.4 22 82 A A H X S+ 0 0 46 -4,-2.9 4,-2.3 -5,-0.2 -2,-0.2 0.924 117.2 46.8 -66.2 -46.0 3.0 3.2 -29.3 23 83 A G H X S+ 0 0 6 -4,-2.7 4,-2.7 -5,-0.2 5,-0.2 0.953 112.9 47.9 -61.7 -52.2 -0.5 2.9 -27.7 24 84 A V H X S+ 0 0 38 -4,-2.6 4,-2.2 1,-0.2 -2,-0.2 0.957 115.0 44.6 -53.5 -57.4 -0.9 6.6 -27.0 25 85 A I H X S+ 0 0 87 -4,-2.0 4,-2.2 -5,-0.2 -1,-0.2 0.890 112.2 54.8 -55.6 -42.0 0.2 7.7 -30.4 26 86 A G H X S+ 0 0 25 -4,-2.3 4,-2.3 -5,-0.2 -1,-0.2 0.945 107.8 47.1 -58.0 -51.7 -2.0 5.0 -32.0 27 87 A T H X S+ 0 0 14 -4,-2.7 4,-3.5 1,-0.2 5,-0.3 0.914 109.5 54.9 -57.2 -45.6 -5.2 6.1 -30.3 28 88 A I H X S+ 0 0 74 -4,-2.2 4,-3.1 -5,-0.2 -1,-0.2 0.933 108.9 47.4 -53.7 -51.1 -4.5 9.8 -31.2 29 89 A L H X S+ 0 0 120 -4,-2.2 4,-1.3 2,-0.2 -1,-0.2 0.951 115.7 44.2 -56.3 -53.5 -4.2 8.9 -34.9 30 90 A L H >X S+ 0 0 133 -4,-2.3 4,-1.4 1,-0.2 3,-0.7 0.945 115.1 48.4 -57.4 -51.6 -7.4 6.8 -34.9 31 91 A I H >X S+ 0 0 63 -4,-3.5 4,-1.6 1,-0.3 3,-0.6 0.927 106.9 55.7 -55.1 -48.9 -9.3 9.4 -32.8 32 92 A S H 3X S+ 0 0 76 -4,-3.1 4,-0.9 -5,-0.3 -1,-0.3 0.798 105.3 55.3 -55.1 -29.1 -8.2 12.2 -35.1 33 93 A Y H + 0 0 107 -36,-0.0 4,-2.2 -39,-0.0 5,-0.2 0.061 64.0 58.2-168.5 -64.2 7.8 -9.4 -21.1 52 73 B I H > S+ 0 0 129 1,-0.2 4,-2.5 2,-0.2 5,-0.2 0.927 106.0 54.3 -49.8 -52.3 4.7 -9.6 -23.2 53 74 B T H > S+ 0 0 102 1,-0.2 4,-3.2 2,-0.2 -1,-0.2 0.909 107.2 51.1 -49.4 -48.5 2.5 -8.7 -20.2 54 75 B L H > S+ 0 0 47 1,-0.2 4,-2.8 2,-0.2 -1,-0.2 0.932 109.1 50.2 -56.2 -49.2 4.5 -5.5 -19.7 55 76 B I H X S+ 0 0 44 -4,-2.2 4,-2.1 1,-0.2 -1,-0.2 0.910 113.9 45.4 -56.4 -45.3 4.2 -4.5 -23.3 56 77 B I H X S+ 0 0 97 -4,-2.5 4,-2.7 2,-0.2 -2,-0.2 0.946 112.2 50.4 -64.3 -50.2 0.4 -5.0 -23.2 57 78 B F H X S+ 0 0 133 -4,-3.2 4,-2.8 -5,-0.2 5,-0.2 0.924 110.8 50.2 -54.5 -48.5 0.0 -3.2 -19.9 58 79 B G H X S+ 0 0 0 -4,-2.8 4,-2.7 1,-0.2 5,-0.2 0.953 113.9 42.4 -56.0 -54.8 2.0 -0.2 -21.1 59 80 B V H X S+ 0 0 42 -4,-2.1 4,-2.6 1,-0.2 5,-0.2 0.843 114.0 54.5 -61.7 -34.3 0.0 0.2 -24.3 60 81 B M H X S+ 0 0 119 -4,-2.7 4,-2.0 -5,-0.2 5,-0.2 0.930 111.4 42.8 -65.7 -47.0 -3.2 -0.4 -22.4 61 82 B A H X S+ 0 0 52 -4,-2.8 4,-2.2 -5,-0.2 -2,-0.2 0.920 117.3 46.8 -65.9 -45.3 -2.5 2.4 -19.9 62 83 B G H X S+ 0 0 5 -4,-2.7 4,-2.7 -5,-0.2 5,-0.2 0.954 112.9 47.8 -62.3 -52.2 -1.3 4.8 -22.5 63 84 B V H X S+ 0 0 36 -4,-2.6 4,-2.2 1,-0.2 -2,-0.2 0.959 115.4 44.0 -53.3 -58.2 -4.2 4.2 -24.9 64 85 B I H X S+ 0 0 93 -4,-2.0 4,-2.2 -5,-0.2 -1,-0.2 0.884 112.6 55.0 -55.6 -41.0 -6.8 4.5 -22.2 65 86 B G H X S+ 0 0 25 -4,-2.2 4,-2.3 -5,-0.2 -1,-0.2 0.947 107.7 46.8 -58.6 -52.0 -5.0 7.6 -20.9 66 87 B T H X S+ 0 0 10 -4,-2.7 4,-3.5 1,-0.2 5,-0.3 0.914 109.7 55.1 -57.1 -45.6 -5.0 9.5 -24.1 67 88 B I H X S+ 0 0 65 -4,-2.2 4,-3.2 -5,-0.2 -1,-0.2 0.934 108.8 47.3 -53.7 -51.2 -8.7 8.7 -24.7 68 89 B L H X S+ 0 0 112 -4,-2.2 4,-1.3 2,-0.2 -1,-0.2 0.950 115.6 44.5 -56.4 -53.2 -9.7 10.2 -21.4 69 90 B L H >X S+ 0 0 128 -4,-2.3 4,-1.4 1,-0.2 3,-0.7 0.947 115.4 47.6 -57.3 -52.1 -7.6 13.3 -21.9 70 91 B I H >X S+ 0 0 60 -4,-3.5 4,-1.6 1,-0.3 3,-0.7 0.926 107.2 56.0 -55.6 -48.5 -8.8 13.7 -25.5 71 92 B S H 3X S+ 0 0 64 -4,-3.2 4,-0.9 -5,-0.3 -1,-0.3 0.795 104.7 55.8 -55.2 -28.7 -12.4 13.2 -24.5 72 93 B Y H S+ 0 0 155 -4,-1.3 4,-1.5 -3,-0.7 5,-0.7 0.859 102.2 54.7 -72.9 -36.7 -11.9 16.1 -22.1 73 94 B G H <<5S+ 0 0 54 -4,-1.4 -2,-0.2 -3,-0.7 -1,-0.2 0.875 104.1 54.0 -64.9 -38.2 -10.8 18.4 -24.8 74 95 B I H <5S+ 0 0 121 -4,-1.6 -1,-0.2 1,-0.2 -2,-0.2 0.824 108.2 50.6 -65.5 -31.8 -13.9 17.8 -26.9 75 96 B R H <5S- 0 0 187 -4,-0.9 -1,-0.2 -5,-0.2 -2,-0.2 0.828 90.1-153.5 -74.9 -33.1 -16.1 18.8 -23.9 76 97 B R T <5 0 0 235 -4,-1.5 -3,-0.1 1,-0.1 -2,-0.1 0.789 360.0 360.0 62.9 27.6 -14.1 22.0 -23.3 77 98 B L < 0 0 140 -5,-0.7 -1,-0.1 0, 0.0 -2,-0.1 -0.873 360.0 360.0-160.1 360.0 -15.1 21.8 -19.6