==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=10-MAR-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER LYASE 04-NOV-09 2KQB . COMPND 2 MOLECULE: APRATAXIN AND PNK-LIKE FACTOR; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR D.NEUHAUS,S.EUSTERMANN,C.BROCKMANN,J.YANG . 55 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4782.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 16 29.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 3 5.5 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 3.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 12.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 4 7.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 363 A G 0 0 91 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 158.0 -17.1 -8.8 -5.7 2 364 A P + 0 0 121 0, 0.0 4,-0.1 0, 0.0 0, 0.0 0.044 360.0 59.7 -72.6-171.3 -14.3 -11.0 -6.8 3 365 A L S S+ 0 0 174 2,-0.2 3,-0.1 1,-0.1 0, 0.0 0.920 116.9 21.5 53.0 95.3 -13.8 -12.1 -10.5 4 366 A G S S+ 0 0 81 1,-0.2 2,-0.3 2,-0.1 -1,-0.1 0.883 97.3 115.7 87.2 41.1 -13.4 -8.9 -12.5 5 367 A S + 0 0 76 1,-0.2 -1,-0.2 0, 0.0 -2,-0.2 -0.853 44.3 60.4-146.3 108.6 -12.3 -6.6 -9.6 6 368 A G + 0 0 42 -2,-0.3 -1,-0.2 -4,-0.1 27,-0.1 0.313 39.9 139.7 139.1 84.2 -8.8 -4.9 -9.4 7 369 A S + 0 0 99 25,-0.1 2,-0.2 -3,-0.1 3,-0.1 -0.196 37.2 106.7-142.2 48.2 -7.5 -2.5 -12.0 8 370 A E + 0 0 70 1,-0.1 4,-0.1 2,-0.1 -1,-0.1 -0.548 40.4 103.6-127.0 70.0 -5.8 0.4 -10.2 9 371 A G S S+ 0 0 32 -2,-0.2 -1,-0.1 -3,-0.1 23,-0.1 -0.116 78.9 40.1-139.3 40.8 -2.0 -0.1 -10.8 10 372 A N S S- 0 0 144 22,-0.1 -2,-0.1 -3,-0.1 2,-0.0 0.325 124.6 -2.6-148.9 -66.9 -1.0 2.6 -13.4 11 373 A K S S+ 0 0 185 2,-0.0 2,-0.3 30,-0.0 -2,-0.0 -0.421 98.6 97.5-137.1 63.7 -2.7 6.1 -13.2 12 374 A V S S- 0 0 63 -4,-0.1 2,-1.3 -2,-0.0 -4,-0.0 -0.970 75.9-105.0-144.7 160.5 -5.1 6.1 -10.3 13 375 A K - 0 0 184 -2,-0.3 22,-0.1 22,-0.0 3,-0.1 -0.675 41.0-153.2 -89.4 91.9 -5.2 7.3 -6.6 14 376 A R - 0 0 30 -2,-1.3 2,-0.3 1,-0.1 20,-0.1 -0.224 23.4-105.0 -60.0 154.0 -5.0 3.9 -4.7 15 377 A T E -a 34 0A 90 18,-0.8 20,-3.6 1,-0.1 29,-0.1 -0.622 42.2-100.3 -81.0 138.4 -6.5 3.9 -1.2 16 378 A S E -a 35 0A 27 -2,-0.3 20,-0.2 18,-0.2 -1,-0.1 -0.162 46.6-102.1 -52.8 151.9 -3.9 4.0 1.6 17 379 A C > - 0 0 2 18,-1.6 3,-0.7 3,-0.2 -1,-0.1 -0.406 26.1-111.1 -75.8 157.0 -3.3 0.5 3.2 18 380 A M T 3 S+ 0 0 148 1,-0.3 3,-0.1 2,-0.1 -1,-0.1 0.819 122.6 46.3 -57.8 -26.2 -4.9 -0.4 6.6 19 381 A Y T > S- 0 0 109 1,-0.2 3,-1.8 2,-0.1 2,-1.6 0.718 84.0-173.2 -89.6 -19.3 -1.3 -0.4 8.0 20 382 A G T < S+ 0 0 1 -3,-0.7 3,-0.2 1,-0.3 -1,-0.2 -0.416 81.1 4.0 64.6 -91.1 -0.3 2.9 6.4 21 383 A A T 3 S+ 0 0 47 -2,-1.6 -1,-0.3 1,-0.1 -2,-0.1 0.479 133.3 56.0-104.7 -3.1 3.4 2.8 7.4 22 384 A N < + 0 0 124 -3,-1.8 -2,-0.1 -4,-0.0 -1,-0.1 0.176 66.9 150.9-113.8 20.0 3.5 -0.7 9.1 23 385 A C + 0 0 39 -3,-0.2 13,-0.0 1,-0.1 3,-0.0 -0.194 17.6 179.3 -50.3 139.7 2.2 -3.0 6.2 24 386 A Y + 0 0 150 0, 0.0 -1,-0.1 0, 0.0 2,-0.0 0.728 53.2 73.9-115.9 -36.4 3.7 -6.5 6.6 25 387 A R - 0 0 100 5,-0.0 2,-0.3 1,-0.0 0, 0.0 -0.378 59.5-167.5 -75.6 160.4 2.2 -8.6 3.7 26 388 A K + 0 0 158 -2,-0.0 -1,-0.0 4,-0.0 3,-0.0 -0.761 13.5 162.0-153.8 104.3 3.5 -8.0 0.1 27 389 A N > - 0 0 96 -2,-0.3 4,-1.0 1,-0.1 -2,-0.0 -0.786 47.4-117.1-118.7 165.9 1.9 -9.4 -3.1 28 390 A P T 4 S+ 0 0 103 0, 0.0 4,-0.2 0, 0.0 -1,-0.1 0.784 118.2 36.6 -71.9 -26.2 2.2 -8.5 -6.8 29 391 A V T >> S+ 0 0 75 2,-0.1 4,-1.1 1,-0.1 3,-0.6 0.676 103.6 69.9 -98.4 -21.0 -1.5 -7.5 -6.9 30 392 A H H >> S+ 0 0 16 1,-0.2 4,-2.6 2,-0.2 3,-0.6 0.915 91.5 60.5 -65.9 -38.2 -1.9 -6.0 -3.3 31 393 A F H 3< S+ 0 0 96 -4,-1.0 -1,-0.2 1,-0.2 -2,-0.1 0.821 104.5 52.0 -58.5 -26.4 0.3 -2.9 -4.3 32 394 A Q H <4 S+ 0 0 65 -3,-0.6 -1,-0.2 -4,-0.2 -2,-0.2 0.814 113.7 41.0 -80.7 -29.4 -2.4 -2.2 -7.0 33 395 A H H << S+ 0 0 66 -4,-1.1 -18,-0.8 -3,-0.6 2,-0.4 0.854 121.7 34.7 -87.3 -35.6 -5.4 -2.3 -4.5 34 396 A F E < S-a 15 0A 58 -4,-2.6 -18,-0.2 -20,-0.1 -1,-0.2 -0.958 74.6-141.8-122.2 137.6 -3.8 -0.5 -1.5 35 397 A S E -a 16 0A 0 -20,-3.6 -18,-1.6 -2,-0.4 -15,-0.2 -0.418 16.2-156.8 -89.2 169.2 -1.3 2.5 -1.7 36 398 A H > - 0 0 16 -20,-0.2 3,-1.3 -2,-0.1 6,-0.3 -0.979 30.9 -84.9-144.1 157.7 1.6 3.0 0.7 37 399 A P T 3 S+ 0 0 59 0, 0.0 3,-0.1 0, 0.0 4,-0.0 -0.330 114.6 42.7 -60.7 138.5 3.8 5.8 1.9 38 400 A G T 3 S+ 0 0 85 1,-0.4 2,-0.3 4,-0.0 3,-0.0 0.416 92.8 103.9 101.6 -1.7 6.6 6.4 -0.6 39 401 A D S X S- 0 0 71 -3,-1.3 3,-1.5 1,-0.1 -1,-0.4 -0.848 79.5-121.8-112.3 150.4 4.4 6.1 -3.7 40 402 A S T 3 S+ 0 0 125 -2,-0.3 -1,-0.1 1,-0.3 -5,-0.0 0.786 114.1 47.1 -61.1 -23.5 3.1 9.0 -5.8 41 403 A D T 3 S+ 0 0 38 -5,-0.1 -1,-0.3 -26,-0.0 -6,-0.1 0.427 77.7 130.7 -99.3 4.6 -0.5 7.9 -5.1 42 404 A Y < + 0 0 55 -3,-1.5 -27,-0.1 -6,-0.3 -4,-0.0 -0.260 19.6 159.0 -54.9 141.2 -0.2 7.4 -1.3 43 405 A G + 0 0 57 -29,-0.1 -27,-0.2 -30,-0.0 -1,-0.1 0.018 37.5 96.9-158.3 39.8 -3.1 9.3 0.5 44 406 A G + 0 0 17 -29,-0.1 -2,-0.0 -24,-0.0 -8,-0.0 0.882 39.5 170.4 -97.3 -56.2 -3.7 7.9 4.0 45 407 A V + 0 0 118 1,-0.2 2,-0.5 3,-0.0 -25,-0.0 0.947 6.2 169.7 44.3 67.0 -1.7 10.3 6.2 46 408 A Q - 0 0 80 1,-0.1 -1,-0.2 2,-0.0 -2,-0.0 -0.397 65.5 -76.8-105.0 58.0 -3.1 8.9 9.6 47 409 A I + 0 0 124 -2,-0.5 2,-0.4 1,-0.2 -1,-0.1 0.973 69.9 166.2 50.7 74.9 -0.7 10.7 12.0 48 410 A V S S- 0 0 85 -28,-0.0 -1,-0.2 -27,-0.0 4,-0.1 -0.601 75.7 -22.2-119.8 72.1 2.5 8.6 11.5 49 411 A G S > S- 0 0 29 -2,-0.4 4,-1.0 1,-0.1 -2,-0.0 -0.183 79.4-134.4 121.8 -42.4 5.3 10.6 13.1 50 412 A Q T >4 S- 0 0 108 1,-0.2 3,-1.8 2,-0.2 -1,-0.1 0.981 79.2 -34.6 53.6 77.0 3.8 14.1 13.0 51 413 A D T 34 S- 0 0 147 1,-0.3 -1,-0.2 -3,-0.1 -2,-0.1 0.815 104.4 -78.5 50.1 30.5 6.8 16.1 11.6 52 414 A E T 34 S+ 0 0 184 1,-0.2 2,-0.4 -4,-0.1 -1,-0.3 0.882 96.5 135.7 49.0 40.6 9.1 13.8 13.7 53 415 A T << + 0 0 94 -3,-1.8 -1,-0.2 -4,-1.0 -4,-0.1 -0.522 12.0 125.8-117.2 66.9 8.3 15.7 16.9 54 416 A D 0 0 117 -2,-0.4 -1,-0.1 -3,-0.0 -4,-0.0 -0.231 360.0 360.0-114.8 45.3 7.6 12.9 19.5 55 417 A D 0 0 211 -3,-0.0 -2,-0.0 0, 0.0 -3,-0.0 -0.283 360.0 360.0-117.4 360.0 10.1 14.0 22.2