==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=10-MAR-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER LYASE 04-NOV-09 2KQC . COMPND 2 MOLECULE: APRATAXIN AND PNK-LIKE FACTOR; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR D.NEUHAUS,S.EUSTERMANN,C.BROCKMANN,J.YANG . 47 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4881.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 12 25.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 8.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 6.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 4 8.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 405 A G 0 0 143 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 125.9 -6.5 8.4 27.2 2 406 A G - 0 0 72 1,-0.0 2,-0.2 3,-0.0 0, 0.0 0.158 360.0-176.4 140.6 97.2 -3.3 7.5 25.2 3 407 A V + 0 0 138 2,-0.0 2,-0.2 0, 0.0 -1,-0.0 -0.363 60.3 76.8-111.4 54.5 -1.5 9.9 22.8 4 408 A Q S S- 0 0 166 -2,-0.2 2,-0.0 3,-0.1 0, 0.0 -0.809 84.6-104.1-144.9-173.7 1.3 7.5 21.6 5 409 A I + 0 0 106 -2,-0.2 2,-0.8 1,-0.1 3,-0.3 -0.311 69.3 124.1-115.1 51.7 2.0 4.5 19.3 6 410 A V S S- 0 0 128 1,-0.2 -1,-0.1 2,-0.1 -2,-0.0 -0.644 93.2 -9.2-108.9 75.1 2.2 1.6 21.8 7 411 A G S S+ 0 0 72 -2,-0.8 -1,-0.2 4,-0.0 -3,-0.1 0.832 72.4 172.1 103.6 60.3 -0.5 -0.8 20.5 8 412 A Q S S- 0 0 84 -3,-0.3 -2,-0.1 1,-0.1 -3,-0.0 0.995 75.3 -48.0 -65.4 -59.9 -2.4 1.2 17.8 9 413 A D S S- 0 0 133 0, 0.0 -1,-0.1 0, 0.0 3,-0.0 0.043 82.3 -79.5-169.9 44.6 -4.5 -1.8 16.5 10 414 A E S S+ 0 0 197 1,-0.1 2,-0.3 2,-0.1 3,-0.2 0.940 83.3 140.5 53.4 48.7 -2.4 -5.0 16.0 11 415 A T + 0 0 35 1,-0.1 -1,-0.1 2,-0.0 3,-0.1 -0.492 25.7 103.2-120.7 65.3 -1.1 -3.7 12.6 12 416 A D + 0 0 79 -2,-0.3 -1,-0.1 1,-0.1 29,-0.1 0.151 65.7 68.1-128.3 19.8 2.6 -4.7 12.4 13 417 A D + 0 0 159 -3,-0.2 -1,-0.1 22,-0.0 22,-0.0 -0.053 60.6 157.5-129.3 35.5 2.5 -7.7 10.1 14 418 A R - 0 0 75 -3,-0.1 20,-0.2 1,-0.1 19,-0.1 -0.207 34.8-142.3 -58.1 154.8 1.6 -6.2 6.6 15 419 A P - 0 0 57 0, 0.0 19,-0.1 0, 0.0 -1,-0.1 0.954 47.7 -73.7 -85.9 -71.1 2.6 -8.3 3.6 16 420 A E - 0 0 134 17,-0.3 20,-0.1 20,-0.0 18,-0.1 -0.347 33.1-122.8 167.6 108.2 3.8 -5.9 0.8 17 421 A C - 0 0 11 18,-2.0 6,-0.0 1,-0.1 13,-0.0 -0.312 20.3-136.7 -57.5 142.0 1.9 -3.5 -1.6 18 422 A P S S+ 0 0 105 0, 0.0 4,-0.2 0, 0.0 -1,-0.1 0.954 101.5 58.2 -66.8 -49.3 2.7 -4.4 -5.3 19 423 A Y S > S+ 0 0 113 1,-0.2 3,-1.4 2,-0.1 4,-0.1 0.941 76.2 161.6 -45.8 -55.7 3.1 -0.6 -6.3 20 424 A G G > S+ 0 0 18 1,-0.3 3,-0.7 15,-0.2 -1,-0.2 -0.578 72.8 5.4 72.3-121.1 5.9 -0.1 -3.7 21 425 A P G 3 S+ 0 0 144 0, 0.0 2,-0.4 0, 0.0 -1,-0.3 0.795 134.4 56.2 -67.8 -27.0 7.8 3.0 -4.6 22 426 A S G < S+ 0 0 90 -3,-1.4 2,-0.7 -4,-0.2 -2,-0.1 -0.257 76.3 125.8 -99.7 50.4 5.3 3.8 -7.4 23 427 A C < + 0 0 32 -3,-0.7 -6,-0.0 -2,-0.4 13,-0.0 -0.894 20.6 160.6-109.6 111.5 2.2 3.8 -5.2 24 428 A Y + 0 0 209 -2,-0.7 2,-0.3 2,-0.0 -1,-0.1 -0.049 36.7 114.5-118.2 34.8 0.1 7.0 -5.5 25 429 A R - 0 0 80 2,-0.0 2,-0.5 1,-0.0 -2,-0.0 -0.796 50.1-154.2-105.6 147.8 -3.3 5.8 -4.1 26 430 A K + 0 0 195 -2,-0.3 -2,-0.0 4,-0.0 -1,-0.0 -0.705 32.7 150.9-120.0 82.5 -4.9 7.0 -0.8 27 431 A N > - 0 0 65 -2,-0.5 4,-1.3 1,-0.1 -2,-0.0 -0.823 45.9-136.3-112.1 153.3 -7.2 4.3 0.5 28 432 A P H > S+ 0 0 111 0, 0.0 4,-0.5 0, 0.0 -1,-0.1 0.923 107.6 37.2 -72.9 -44.6 -8.2 3.6 4.2 29 433 A Q H > S+ 0 0 91 2,-0.2 4,-2.1 1,-0.1 5,-0.3 0.750 108.6 65.8 -80.4 -21.5 -7.8 -0.2 3.9 30 434 A H H >> S+ 0 0 4 1,-0.2 4,-2.4 2,-0.2 3,-0.5 0.986 98.5 51.4 -64.3 -53.6 -4.7 -0.0 1.6 31 435 A K H 3< S+ 0 0 92 -4,-1.3 -1,-0.2 1,-0.2 -2,-0.2 0.801 119.4 38.9 -54.2 -25.0 -2.5 1.6 4.3 32 436 A I H 3< S+ 0 0 80 -4,-0.5 -1,-0.2 -3,-0.1 -2,-0.2 0.687 120.0 43.6 -99.5 -19.2 -3.6 -1.3 6.6 33 437 A E H << S+ 0 0 86 -4,-2.1 2,-0.4 -3,-0.5 -17,-0.3 0.888 120.8 27.3 -92.3 -43.8 -3.6 -4.2 4.1 34 438 A Y S < S- 0 0 95 -4,-2.4 -1,-0.3 -5,-0.3 -20,-0.1 -0.964 70.5-151.2-122.6 132.6 -0.3 -3.6 2.1 35 439 A R - 0 0 82 -2,-0.4 -18,-2.0 -3,-0.1 -15,-0.2 -0.226 10.3-141.5 -86.2-176.0 2.9 -1.8 3.4 36 440 A H S S+ 0 0 63 -20,-0.1 2,-0.2 -5,-0.1 -13,-0.1 0.014 75.8 12.9-136.9 30.4 5.3 0.2 1.2 37 441 A N S S- 0 0 98 2,-0.1 -2,-0.1 -16,-0.0 -20,-0.1 -0.901 73.7-108.2-173.6-159.0 8.8 -0.7 2.8 38 442 A T + 0 0 105 -2,-0.2 -22,-0.0 2,-0.1 -3,-0.0 -0.225 65.7 113.5-151.4 55.2 10.4 -3.2 5.2 39 443 A L - 0 0 123 2,-0.0 5,-0.1 1,-0.0 -2,-0.1 -0.954 61.6-112.5-130.1 150.8 11.3 -1.4 8.5 40 444 A P - 0 0 80 0, 0.0 -2,-0.1 0, 0.0 -28,-0.0 -0.261 15.4-147.4 -72.9 164.9 10.1 -1.7 12.1 41 445 A V S S+ 0 0 89 -29,-0.1 3,-0.1 -36,-0.0 -36,-0.0 -0.272 86.4 17.0-129.6 49.3 8.2 1.3 13.7 42 446 A R S S+ 0 0 190 -36,-0.0 2,-1.0 0, 0.0 3,-0.0 0.135 108.8 66.3 179.3 -43.3 9.3 1.0 17.4 43 447 A N + 0 0 90 1,-0.1 -2,-0.0 2,-0.1 0, 0.0 -0.698 56.3 123.3-101.2 86.3 12.4 -1.2 18.0 44 448 A V S S+ 0 0 99 -2,-1.0 -1,-0.1 -3,-0.1 -5,-0.0 -0.107 85.7 5.9-132.9 38.3 15.2 0.8 16.3 45 449 A L S S- 0 0 131 -3,-0.0 -2,-0.1 0, 0.0 0, 0.0 0.073 73.2-154.0-179.7 -50.3 17.8 1.3 19.1 46 450 A D 0 0 100 1,-0.1 -3,-0.1 0, 0.0 0, 0.0 0.914 360.0 360.0 54.1 98.1 16.9 -0.6 22.3 47 451 A E 0 0 232 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 0.336 360.0 360.0-123.6 360.0 18.5 1.3 25.3