==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=10-MAR-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER LYASE 04-NOV-09 2KQD . COMPND 2 MOLECULE: APRATAXIN AND PNK-LIKE FACTOR; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR D.NEUHAUS,S.EUSTERMANN,C.BROCKMANN,J.YANG . 55 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4993.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 20 36.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 3 5.5 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 10.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 10.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 4 7.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 363 A G 0 0 118 0, 0.0 2,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 79.9 20.6 7.3 15.0 2 364 A P + 0 0 128 0, 0.0 2,-0.2 0, 0.0 0, 0.0 -0.416 360.0 172.2 -72.7 148.5 20.0 8.6 11.5 3 365 A L + 0 0 171 -2,-0.1 0, 0.0 1,-0.1 0, 0.0 -0.786 28.9 118.1-143.0-172.9 17.3 6.8 9.4 4 366 A G + 0 0 74 -2,-0.2 -1,-0.1 1,-0.0 0, 0.0 0.774 39.3 122.8 112.1 56.7 15.4 7.0 6.0 5 367 A S + 0 0 116 0, 0.0 2,-0.6 0, 0.0 -1,-0.0 -0.313 25.0 128.1-142.8 57.3 16.2 3.9 3.9 6 368 A G + 0 0 50 2,-0.0 2,-0.3 8,-0.0 8,-0.0 -0.886 20.1 143.6-118.0 104.4 13.0 2.1 3.0 7 369 A S + 0 0 96 -2,-0.6 2,-0.6 26,-0.0 26,-0.2 -0.870 17.3 176.9-143.1 108.7 12.5 1.4 -0.7 8 370 A E - 0 0 28 24,-0.9 26,-0.1 -2,-0.3 4,-0.1 -0.909 3.4-178.4-114.9 110.8 10.9 -1.8 -2.1 9 371 A G S S- 0 0 43 -2,-0.6 -1,-0.2 1,-0.1 3,-0.0 0.982 70.6 -50.5 -69.1 -78.7 10.5 -2.1 -5.9 10 372 A N S S+ 0 0 142 3,-0.0 -1,-0.1 1,-0.0 -2,-0.0 0.011 125.5 60.3-153.7 37.2 8.7 -5.4 -6.4 11 373 A K S S+ 0 0 191 30,-0.0 2,-0.3 0, 0.0 -2,-0.1 0.004 84.0 75.8-158.3 40.5 10.5 -8.2 -4.5 12 374 A V S S- 0 0 73 -4,-0.1 2,-1.6 -3,-0.0 -4,-0.1 -0.977 87.4 -92.1-149.0 161.0 10.5 -7.3 -0.7 13 375 A K - 0 0 161 -2,-0.3 22,-0.1 22,-0.0 3,-0.1 -0.567 49.1-154.5 -78.7 90.8 8.0 -7.4 2.2 14 376 A R - 0 0 23 -2,-1.6 2,-0.3 1,-0.1 20,-0.1 -0.233 22.4-103.7 -61.5 154.4 6.7 -3.8 2.0 15 377 A T E -a 34 0A 87 18,-0.7 20,-3.8 1,-0.1 29,-0.1 -0.615 42.9-100.8 -79.3 138.5 5.3 -2.2 5.2 16 378 A S E -a 35 0A 25 27,-0.3 20,-0.2 -2,-0.3 2,-0.1 -0.190 47.4-104.5 -53.4 151.2 1.5 -2.1 5.3 17 379 A C > - 0 0 4 18,-1.4 3,-1.7 17,-0.1 4,-0.2 -0.457 26.9-105.7 -79.8 156.1 0.2 1.4 4.4 18 380 A M T 3 S+ 0 0 141 1,-0.3 -1,-0.1 -2,-0.1 3,-0.1 0.835 122.1 9.0 -48.3 -30.9 -1.1 3.8 7.1 19 381 A Y T >> S+ 0 0 144 1,-0.1 3,-2.8 2,-0.0 4,-0.7 -0.095 80.4 153.2-140.6 37.4 -4.6 3.1 5.7 20 382 A G G X4 S+ 0 0 9 -3,-1.7 3,-0.9 1,-0.3 -2,-0.1 0.850 75.0 57.9 -38.4 -46.1 -4.0 0.1 3.2 21 383 A A G 34 S+ 0 0 45 1,-0.2 -1,-0.3 -4,-0.2 -3,-0.0 0.843 130.5 12.9 -58.6 -28.7 -7.6 -1.1 3.7 22 384 A N G <4 S+ 0 0 130 -3,-2.8 2,-1.3 0, 0.0 -1,-0.2 0.036 78.0 162.0-135.1 28.8 -8.8 2.4 2.5 23 385 A C << - 0 0 32 -3,-0.9 -3,-0.1 -4,-0.7 -5,-0.0 -0.270 12.6-178.8 -53.0 88.7 -5.6 4.0 1.0 24 386 A Y + 0 0 192 -2,-1.3 -1,-0.2 -5,-0.0 -4,-0.0 0.881 60.1 72.7 -62.7 -35.9 -7.6 6.7 -1.0 25 387 A R - 0 0 104 -3,-0.1 2,-0.2 5,-0.0 0, 0.0 -0.333 63.5-173.5 -76.0 163.2 -4.3 8.2 -2.5 26 388 A K + 0 0 157 -2,-0.0 -2,-0.0 4,-0.0 3,-0.0 -0.776 7.0 170.6-161.0 112.0 -2.4 6.3 -5.2 27 389 A N > - 0 0 81 -2,-0.2 4,-0.9 1,-0.1 -2,-0.0 -0.749 43.0-115.8-118.9 169.8 1.1 7.2 -6.7 28 390 A P T 4 S+ 0 0 101 0, 0.0 4,-0.2 0, 0.0 -1,-0.1 0.811 118.2 31.0 -74.6 -29.3 3.5 5.3 -9.0 29 391 A V T >> S+ 0 0 77 2,-0.1 4,-1.3 1,-0.1 3,-0.6 0.673 104.8 73.6-100.4 -21.5 6.2 5.2 -6.3 30 392 A H H 3> S+ 0 0 28 1,-0.2 4,-2.6 2,-0.2 3,-0.3 0.911 90.9 59.3 -61.9 -38.2 3.9 5.0 -3.1 31 393 A F H 3< S+ 0 0 95 -4,-0.9 -1,-0.2 1,-0.2 -2,-0.1 0.867 105.1 51.2 -59.0 -31.9 3.0 1.4 -3.9 32 394 A Q H <4 S+ 0 0 50 -3,-0.6 -24,-0.9 -4,-0.2 -1,-0.2 0.848 113.6 42.9 -75.3 -31.6 6.8 0.5 -3.6 33 395 A H H < S+ 0 0 71 -4,-1.3 -18,-0.7 -3,-0.3 2,-0.4 0.849 122.2 34.0 -82.8 -33.8 7.2 2.3 -0.2 34 396 A F E < S-a 15 0A 66 -4,-2.6 -18,-0.2 -20,-0.1 -1,-0.2 -0.957 74.2-140.1-124.1 141.9 3.9 0.9 1.4 35 397 A S E -a 16 0A 0 -20,-3.8 -18,-1.4 -2,-0.4 -15,-0.1 -0.418 18.1-152.6 -90.5 170.8 2.2 -2.5 0.9 36 398 A H > - 0 0 13 -20,-0.2 3,-1.3 -2,-0.1 6,-0.3 -0.991 27.5 -89.7-144.6 153.8 -1.6 -2.9 0.7 37 399 A P T 3 S+ 0 0 53 0, 0.0 3,-0.1 0, 0.0 4,-0.0 -0.320 111.6 43.2 -60.2 138.8 -4.2 -5.6 1.4 38 400 A G T 3 S+ 0 0 84 1,-0.4 2,-0.2 2,-0.0 3,-0.0 0.413 94.5 98.5 102.1 -1.1 -4.7 -7.8 -1.8 39 401 A D S X S- 0 0 87 -3,-1.3 3,-0.8 1,-0.1 -1,-0.4 -0.750 82.3-115.3-114.4 165.3 -0.9 -8.1 -2.6 40 402 A S T 3 S+ 0 0 118 -2,-0.2 -1,-0.1 1,-0.2 -5,-0.0 0.790 114.8 46.7 -70.2 -25.3 1.5 -11.0 -1.9 41 403 A D T 3 S+ 0 0 37 -5,-0.1 -1,-0.2 -29,-0.0 -6,-0.1 0.415 77.6 130.1 -98.4 5.6 3.6 -8.8 0.4 42 404 A Y < + 0 0 46 -3,-0.8 -27,-0.1 -6,-0.3 -26,-0.0 -0.272 20.5 161.1 -56.0 143.4 0.8 -7.1 2.5 43 405 A G + 0 0 59 -29,-0.1 -27,-0.3 -30,-0.0 -1,-0.1 -0.024 38.8 96.8-158.2 41.8 1.6 -7.5 6.2 44 406 A G + 0 0 18 -29,-0.1 -2,-0.0 2,-0.0 -29,-0.0 0.863 40.6 172.9-100.0 -54.0 -0.5 -5.0 8.2 45 407 A V + 0 0 119 1,-0.2 2,-0.8 2,-0.0 -29,-0.0 0.946 7.7 171.7 44.4 66.2 -3.5 -7.0 9.4 46 408 A Q - 0 0 86 1,-0.1 -1,-0.2 2,-0.0 -25,-0.0 -0.572 67.2 -64.2-105.3 71.9 -5.0 -4.3 11.7 47 409 A I S S+ 0 0 118 -2,-0.8 2,-0.7 1,-0.2 3,-0.1 0.976 72.2 170.2 50.8 72.0 -8.4 -5.8 12.7 48 410 A V S S- 0 0 96 1,-0.2 -1,-0.2 2,-0.1 -3,-0.0 -0.705 75.2 -28.4-113.7 80.2 -10.0 -5.9 9.2 49 411 A G S S- 0 0 55 -2,-0.7 -1,-0.2 2,-0.0 4,-0.1 0.971 73.4-171.8 79.1 58.7 -13.3 -7.9 9.7 50 412 A Q S S- 0 0 125 1,-0.2 -2,-0.1 -3,-0.1 3,-0.1 0.968 70.1 -41.8 -49.4 -66.4 -12.1 -10.1 12.6 51 413 A D S S+ 0 0 156 1,-0.0 -1,-0.2 3,-0.0 3,-0.1 0.022 105.9 106.5-159.3 39.5 -15.2 -12.4 12.7 52 414 A E + 0 0 183 1,-0.1 2,-0.2 2,-0.0 -2,-0.1 -0.153 49.9 100.0-115.0 40.5 -18.4 -10.4 12.1 53 415 A T + 0 0 122 -4,-0.1 -1,-0.1 1,-0.1 0, 0.0 -0.504 35.2 120.5-122.3 65.3 -19.2 -11.5 8.5 54 416 A D 0 0 151 -2,-0.2 -1,-0.1 -3,-0.1 -2,-0.0 -0.177 360.0 360.0-118.2 41.7 -21.9 -14.2 8.8 55 417 A D 0 0 214 -3,-0.1 -2,-0.1 0, 0.0 -1,-0.0 0.635 360.0 360.0-126.0 360.0 -24.8 -12.5 6.8