==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=10-MAR-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER LYASE 04-NOV-09 2KQE . COMPND 2 MOLECULE: APRATAXIN AND PNK-LIKE FACTOR; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR D.NEUHAUS,S.EUSTERMANN,C.BROCKMANN,J.YANG . 47 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4645.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 14 29.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 12.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 4.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 5 10.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 405 A G 0 0 140 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-137.9 -24.0 -1.4 -12.0 2 406 A G + 0 0 63 1,-0.0 2,-0.2 0, 0.0 0, 0.0 0.247 360.0 173.3 140.0 89.8 -21.6 -3.8 -10.2 3 407 A V + 0 0 142 2,-0.0 2,-0.2 0, 0.0 -1,-0.0 -0.381 45.6 109.4-115.0 55.5 -20.7 -3.5 -6.5 4 408 A Q S S- 0 0 141 -2,-0.2 2,-0.2 2,-0.0 4,-0.1 -0.612 71.9-115.6-118.8-178.3 -18.7 -6.7 -5.9 5 409 A I + 0 0 112 -2,-0.2 2,-1.2 2,-0.1 -2,-0.0 -0.427 52.1 145.4-116.6 59.2 -15.0 -7.5 -5.4 6 410 A V S S- 0 0 132 -2,-0.2 -1,-0.1 1,-0.1 35,-0.1 -0.399 90.3 -13.3 -92.0 61.4 -14.0 -9.5 -8.5 7 411 A G S > S- 0 0 23 -2,-1.2 2,-3.1 2,-0.1 4,-0.7 -0.113 73.3-153.5 140.4 -40.7 -10.4 -8.2 -8.8 8 412 A Q T 4 S- 0 0 67 1,-0.2 -2,-0.1 -4,-0.1 -4,-0.0 -0.310 81.2 -26.4 69.3 -65.7 -10.3 -5.2 -6.4 9 413 A D T 4 S- 0 0 110 -2,-3.1 -1,-0.2 0, 0.0 -2,-0.1 0.067 97.7 -78.3-172.1 45.1 -7.4 -3.6 -8.4 10 414 A E T 4 + 0 0 163 -3,-0.2 2,-0.5 1,-0.2 3,-0.3 0.970 69.6 160.6 52.5 59.3 -5.3 -6.1 -10.4 11 415 A T < + 0 0 23 -4,-0.7 3,-0.3 1,-0.2 -1,-0.2 -0.496 22.9 122.5-110.4 65.6 -3.2 -7.2 -7.3 12 416 A D S S+ 0 0 124 -2,-0.5 -1,-0.2 1,-0.2 2,-0.1 0.770 78.6 39.3 -94.6 -27.8 -1.8 -10.7 -8.4 13 417 A D S S+ 0 0 135 -3,-0.3 -1,-0.2 21,-0.0 -2,-0.0 -0.363 90.0 117.9-116.0 53.6 1.9 -9.9 -8.0 14 418 A R - 0 0 70 -3,-0.3 20,-0.2 1,-0.2 19,-0.1 -0.951 49.1-153.7-123.7 143.1 1.8 -7.8 -4.7 15 419 A P - 0 0 60 0, 0.0 -1,-0.2 0, 0.0 19,-0.1 0.945 49.9 -81.1 -76.5 -88.4 3.5 -8.5 -1.3 16 420 A E - 0 0 126 17,-0.2 20,-0.2 20,-0.0 18,-0.1 -0.437 30.0-124.6 175.2 105.4 1.5 -6.8 1.5 17 421 A C - 0 0 7 18,-2.6 6,-0.0 1,-0.1 -3,-0.0 -0.317 18.3-138.1 -57.6 139.0 1.6 -3.1 2.8 18 422 A P S S+ 0 0 103 0, 0.0 -1,-0.1 0, 0.0 18,-0.0 0.889 101.6 56.8 -67.9 -37.8 2.3 -2.9 6.5 19 423 A Y S > S+ 0 0 129 1,-0.2 3,-0.7 2,-0.1 17,-0.1 0.962 84.6 177.7 -59.7 -49.1 -0.3 -0.2 7.1 20 424 A G G > - 0 0 12 1,-0.2 3,-0.5 15,-0.1 -1,-0.2 -0.669 62.8 -6.9 85.1-136.1 -3.1 -2.3 5.6 21 425 A P G 3 S+ 0 0 132 0, 0.0 2,-1.1 0, 0.0 -1,-0.2 0.854 132.8 60.7 -67.0 -34.9 -6.7 -0.8 5.6 22 426 A S G < S+ 0 0 111 -3,-0.7 2,-1.0 14,-0.1 -2,-0.1 -0.255 70.9 145.4 -87.8 51.6 -5.6 2.2 7.6 23 427 A C < - 0 0 30 -2,-1.1 13,-0.0 -3,-0.5 -3,-0.0 -0.747 25.0-179.5 -92.9 100.9 -3.1 3.4 5.0 24 428 A Y + 0 0 222 -2,-1.0 2,-0.4 2,-0.0 -1,-0.1 0.507 56.5 90.6 -77.7 -1.2 -3.0 7.3 5.0 25 429 A R - 0 0 76 5,-0.0 2,-0.3 1,-0.0 -2,-0.0 -0.777 52.0-173.4 -98.8 140.3 -0.4 7.5 2.2 26 430 A K + 0 0 167 -2,-0.4 3,-0.0 4,-0.0 -2,-0.0 -0.650 21.7 151.9-130.3 79.7 -1.4 7.7 -1.5 27 431 A N > - 0 0 78 -2,-0.3 4,-0.9 1,-0.1 -2,-0.0 -0.635 50.5-120.8-104.1 166.5 1.6 7.4 -3.9 28 432 A P H > S+ 0 0 111 0, 0.0 4,-0.6 0, 0.0 3,-0.4 0.953 113.5 37.7 -71.5 -50.3 1.7 6.1 -7.4 29 433 A Q H > S+ 0 0 85 1,-0.2 4,-2.7 2,-0.2 5,-0.2 0.708 106.7 68.6 -75.4 -17.7 4.3 3.3 -6.8 30 434 A H H > S+ 0 0 0 1,-0.2 4,-1.5 2,-0.2 -1,-0.2 0.876 98.7 49.1 -72.1 -31.4 2.9 2.5 -3.3 31 435 A K H < S+ 0 0 85 -4,-0.9 -1,-0.2 -3,-0.4 -2,-0.2 0.774 119.4 39.6 -77.5 -20.6 -0.4 1.0 -4.7 32 436 A I H < S+ 0 0 80 -4,-0.6 -2,-0.2 1,-0.1 -1,-0.2 0.789 114.9 50.4 -96.1 -31.2 1.7 -1.1 -7.2 33 437 A E H < S+ 0 0 85 -4,-2.7 2,-0.3 -19,-0.1 -17,-0.2 0.928 121.6 19.1 -74.4 -42.7 4.6 -2.1 -4.8 34 438 A Y S < S- 0 0 88 -4,-1.5 2,-0.3 -5,-0.2 -1,-0.1 -0.808 70.6-137.3-122.6 168.4 2.4 -3.4 -1.9 35 439 A R - 0 0 74 -2,-0.3 -18,-2.6 1,-0.1 -15,-0.1 -0.880 1.1-156.9-121.9 154.6 -1.3 -4.5 -1.5 36 440 A H S S+ 0 0 51 -2,-0.3 2,-0.4 1,-0.2 -1,-0.1 0.624 76.8 51.4-107.7 -14.0 -3.8 -3.7 1.2 37 441 A N - 0 0 54 -17,-0.1 2,-0.4 2,-0.1 -1,-0.2 -0.972 55.5-167.4-127.4 124.6 -6.3 -6.6 1.1 38 442 A T + 0 0 96 -2,-0.4 -1,-0.0 -3,-0.1 -22,-0.0 -0.330 35.3 148.3-102.5 52.7 -5.3 -10.3 1.1 39 443 A L - 0 0 96 -2,-0.4 2,-0.4 1,-0.1 -2,-0.1 -0.580 55.5-102.7 -86.8 152.0 -8.7 -11.8 0.1 40 444 A P + 0 0 97 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 -0.575 47.6 161.0 -73.7 122.5 -8.9 -15.0 -2.0 41 445 A V S S+ 0 0 58 -2,-0.4 -2,-0.0 -35,-0.1 3,-0.0 -0.230 71.5 18.0-137.3 49.1 -9.7 -14.2 -5.7 42 446 A R S S+ 0 0 198 0, 0.0 2,-0.8 0, 0.0 3,-0.1 0.147 112.7 56.7-179.9 -44.1 -8.7 -17.4 -7.7 43 447 A N + 0 0 106 1,-0.1 -2,-0.0 2,-0.1 0, 0.0 -0.687 60.8 121.9-109.6 81.9 -8.3 -20.5 -5.5 44 448 A V S S+ 0 0 94 -2,-0.8 -1,-0.1 -4,-0.0 0, 0.0 -0.107 87.8 4.2-130.0 37.8 -11.7 -21.0 -3.8 45 449 A L S S- 0 0 143 -3,-0.1 -2,-0.1 0, 0.0 0, 0.0 0.062 73.1-154.3 179.6 -50.4 -12.8 -24.5 -4.9 46 450 A D 0 0 115 1,-0.1 -3,-0.1 0, 0.0 0, 0.0 0.924 360.0 360.0 53.4 96.0 -10.1 -26.3 -7.0 47 451 A E 0 0 231 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 0.496 360.0 360.0-125.6 360.0 -12.0 -28.8 -9.3